Array 1 5692-5377 **** Predicted by CRISPRDetect 2.4 *** >NZ_VWMX01000227.1 Bacteroides salyersiae strain BIOML-A26 scaffold227_size5691, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ===================================== ================== 5691 35 100.0 37 ................................... AATGTAGACAAACTGGTTCCTCCGACCCCGGATATGC 5619 35 100.0 35 ................................... ATGATTGGGGTCACCCTGCCAAACATAAACTATTA 5549 35 100.0 34 ................................... CTCTGTACGGTAAAGACGGACAAAAGCATAATAA 5480 35 100.0 34 ................................... TCATTTGTGCCGGTATCGGTGTGATTTGGGCTCT 5411 35 100.0 0 ................................... | ========== ====== ====== ====== =================================== ===================================== ================== 5 35 100.0 35 GTCTTAATCCTTATTCTACTGGAAGTAACTCAAAT # Left flank : | # Right flank : AATCTGATTATCAATAATTTATTTTTTACTCTTTGTTTTGTATATTTCTCATAAAGTATTGTTATTTAATACAATACGCTATATTCCAATAACTTTTTCGCAAATGTATGTATTATTTTTAAGAAAATCAATAATTTGTTTGGCTAATATATGCTTATTTGCTTAAAAATAAGATATTTACATTGAATATCTATTTTCGAAAATGATTTTGAATTTCTTTAAAAAGATTCATTTTCGAAAAACGGTATAGAGGTATTATACAATATATTATTGATTATAAATGCAATACGTCAAAGATCGCTTGTATAGTAATGAATCATTTTCGCAAATGATTTACTTTGTTGCTAACATGTATTTTGTTGCGAATGTGATTTAAGTAATACAATTTATCTAAAAAATATAATATCAAATAAATCAGATAATTATCTTTTTATCGTTTTTCGCAAGAGTTTGGCCTTTTTTCATGTTTTGTTCACTTCATCTCACCACTTGGCCACATA # Questionable array : NO Score: 3.06 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTAATCCTTATTCTACTGGAAGTAACTCAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.00,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [83.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.37 Confidence: LOW] # Array family : NA // Array 1 1055-31 **** Predicted by CRISPRDetect 2.4 *** >NZ_VWMX01000020.1 Bacteroides salyersiae strain BIOML-A26 scaffold20_size39715, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ========================================= ================== 1054 34 80.0 20 ...............T.GA....GA..G-...... CACACAAGTATACATACACA Deletion [1001] 1000 35 71.4 35 ..T...G.TT..G..T..A...G.....T....T. TTTGACGCTTTGAGTTCATCTCTTGGTATCGAGTT 930 35 94.3 37 ..T............T................... AAACCGGTGCATCTTGAACCGAATGATCCAAAAATGT 858 35 100.0 37 ................................... AGACAAAATGTTCTTAATCCTCCCTACTCCCAAAGAT 786 35 100.0 37 ................................... ATGTACACAAGATGGTTGGAATAGCAGCTGCGCCGCC 714 35 100.0 35 ................................... CAGTAGTTTTTGGTGCAATGTGTACTTCCTGCGAC 644 35 100.0 37 ................................... TGTTGTTTAAACGGATATCGGAATCAGGGTATAGCAT 572 35 100.0 39 ................................... GGTATCATGAAAGACAATGCCAAACTTGCTATATTTGCC 498 35 100.0 37 ................................... ATATTGGTTAAAGAATTGTTCCCTTGCTCCGAAGGAA 426 35 100.0 34 ................................... AGCCTTAAGTGTTCTGACTTCTTGCTCCGGTTCT 357 35 100.0 41 ................................... AAGATTATGAAAGCAAAATTAACAGTCGCAAATGTAAAAAG 281 35 100.0 38 ................................... GAAACACGTAAAAATGGAACCCTATAAGCGTTCCAAAA 208 35 100.0 34 ................................... CAACTTGTTACACCAATATTCTGAAAGCCCAGAA 139 35 100.0 39 ................................... TCTTTGCGGCTGAAGCTTGAAACTTTCAGTCTCCTTAAA 65 35 100.0 0 ................................... | ========== ====== ====== ====== =================================== ========================================= ================== 15 35 96.4 36 GTCTTAATCCTTATTCTACTGGAAGTAACTCAAAT # Left flank : TCGTTTGGGTTTCATCAGATGATTTCTTTTTATTTTATACAATTTCTATAGTGCGGGACGTTTGGCGATGTGCCGGTTGATATATGATTTTTGTATAACAATTGACGCAAATCGGATAGTATATGACTGTATCGGAGCGTTTATCCAATATTTTTTTTATTTTCTCTTGCACTTGTAATAGTTGGATATCGGTAAACATACATTCGAATACACTGAAATTGACTCTTATTCCATATTTTTCCAGAATTTTAGAGACGCGTGCTCTTTTCCGGTCTTCTTTAATATCGTATGCTACGACACAGAATGTCTTTTTTGCTCTTGCCATTTGGTGTTGCGTATTTGGAGGTAAATATAATGAAAATGCGGGATATGTGGTATTGGAAAAGAAAAATTTTGAGGTTAAAATGGGGTAATATTATTAGAGTGAATTAAAGGTGTATGATGTATCATTGTTTCTGAATTCGGGATAATGAGATATAAATGATTTTAGAGAGTTGCTT # Right flank : TAAATCATTGAGACGGAAAACGGTTTGGAAA # Questionable array : NO Score: 3.02 # Score Detail : 1:0, 2:0, 3:0, 4:0.82, 5:0, 6:0.25, 7:-0.05, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTAATCCTTATTCTACTGGAAGTAACTCAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.00,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-19] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [31.7-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.64 Confidence: LOW] # Array family : NA //