Array 1 490333-492151 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR822047.1 Streptococcus salivarius isolate commensal strain from anonymous patient (individual 7), whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 490333 36 100.0 30 .................................... AAATGAAAATAACAAAATTCCTGTAGAAGA 490399 36 100.0 30 .................................... AGTCTATGCTATGAGAGTTTATTTTGTTAA 490465 36 100.0 30 .................................... ATAATGAGTTACAGATGTAATAATGATGCG 490531 36 100.0 31 .................................... CCAGCCAAGACTTTCTTGTCGTCTTTGATAG 490598 36 100.0 30 .................................... GCAGTCTAATAAATACGCGGTTGTACCAAT 490664 36 100.0 30 .................................... TATGGGCACTTTTACTTGACAACTAAGTGA 490730 36 100.0 30 .................................... GGTAGCTGATAGCCTTACATAAATAAAGAA 490796 36 100.0 30 .................................... CCTAACTATGAAGTAACACCTACTCCTTAC 490862 36 100.0 30 .................................... GAGCAAACTTTGGCGTGACGTGCACGTAGA 490928 36 100.0 30 .................................... CTCTTATAATCAATTTCTAAATTTTGTAAT 490994 36 100.0 30 .................................... CAGTGAGTAGTTGCCACGCTCTGCCACGTT 491060 36 100.0 30 .................................... ATACGGAGCGATTGATTATGCGAACGCTCT 491126 36 100.0 30 .................................... CGCAGGTAGCGCCTCGGGAGGCGACGGCTC 491192 36 100.0 30 .................................... ATTTCAATGTCAGCCAATTTCTCACAATAA 491258 36 100.0 30 .................................... TACAAGATGAATTTCGCACCATTGGCATTA 491324 36 100.0 30 .................................... AACTGCAAATCCATCGATTGAGTAGCCAGT 491390 36 100.0 30 .................................... GAGTAGTAGTAGCGCTTTGGCAGGTGTAAT 491456 36 100.0 30 .................................... CGTGCTATACTTATAGTAGATAAATAAGAA 491522 36 100.0 30 .................................... CTTAGAAATGCAGTTCTTTGTTGAAATGAA 491588 36 100.0 30 .................................... TTCTAACATGGCGTCTGCAATTAACATAAA 491654 36 100.0 30 .................................... AAGCAAGGCGATAGAACCGTTAATGCTACA 491720 36 100.0 30 .................................... TGCTGGCTCAGTTTGGGATACCATGAAGAA 491786 36 100.0 30 .................................... GTGTCAATCAACGTTACATAATTTAGGACA 491852 36 100.0 30 .................................... AAATAATTAATTAAATAATCAAGAAGTGGT 491918 36 100.0 30 .................................... CAAAAAACGCACCAGACCCCGTAGAGCTGC 491984 36 100.0 30 .................................... CGGTCTAGGTGCTGAAATCGTGGCAGTCTA 492050 36 100.0 30 .................................... TGAACTAATTAAGACGATTGGAGAACACAA 492116 36 80.6 0 ............CC...............T..CCCT | ========== ====== ====== ====== ==================================== =============================== ================== 28 36 99.3 30 GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Left flank : AAGAGAATTTTGGTGTTCGTCAATAGTTTGTCGTATTTTTCTAATGATGAAATTTATCAAATCTTGGAATATACAAAGTTATTACAAGCTGATGTATTATTTTTGGAACCTAGAAAGATTAAAGGTATTCAACAATTTATTTTGGATAAGGATTACATTTTGATGCCTTACAATAACTAGTAATTTGGTAATAAGTATAGATAGTCTTGAGTTATTTCAAGACTATCTTTTAGTATTTAGTAGTTTCTACATGAAGTTGAGTGGAAGAATCATTTTGTTAGAGAGTAGGTTATAAGCTATCTGATAGGTGAGAAGGTAAGTTGATTGGAAAAAGATTTCTAAAATTTTTTCGATATAGCGACAGCTCTATTTGTTAAAACGTTGTTATATAAGGCTTTTTAAGGTATAATAAACATAAAAATGGAATCATTTTGAAGCTGAAGTCAGGCTGAGATGAATAGCGCGATTACGAAATCTGGTAGAGAAAAATGACCTACGAG # Right flank : TCTCTTTGTAACGATTTTGGGTTGACTTCTCCTTAAACTCATCCTATCATAGAGGAGTCTAGTATTGAAATGGGGGAAGAGACATGTTATACGAATATCCAGCGATTTTTCACACGATTGAGGAAGGTTATCAAATTAGTTTTCCTGACTTTGGCCGTAGCATTAGGGCAGATTCTTTGCCTCTTGCCATGACGAAAGCATCTGTGTTTTTATCACATATTATTAAAAGGTATGGAGATAAGCCTTTACCAGAGCCGACTGCGGTTAGCAGTATTCCTAATGAGGAAGAACTCGTCGTTTTGATTCAAACAGAGCTTGATTAAGACTAAAAAACTCTCGGAAGATTAATTCCCGAGAGTTTTAGGTTTTATTGGCCACATAGACGCCCAGGACGACTAAAATGCCTGCAAAAATTTGTAGCTGCGAGAAGGGTTCTCCTAAGACGACAACAGCAGCTAGAATTGAGATAATGGTCGAAATCCCAATAAAGGATGCTGTTC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //