Array 1 224592-227983 **** Predicted by CRISPRDetect 2.4 *** >NZ_UCPZ02000064.1 Acinetobacter baumannii strain D7, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 224592 30 100.0 30 .............................. ATCAATTTTTTATAAAATATGAGTATAAAA 224652 30 96.7 30 .............................G AAAATGGTATGAATAAAGGCGTACCACAGC 224712 30 96.7 30 ............................A. TTAAGCCATTTTCTTTTGTGAATCCTAAAG 224772 30 96.7 30 .............................C ATCAAAGGCTTTGAGGGTAAGCGCCTTTGG 224832 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 224892 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 224952 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 225012 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 225072 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 225132 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 225192 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 225252 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 225312 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 225372 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 225432 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 225492 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 225552 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 225612 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 225672 30 96.7 30 ............................A. CTGCAAGACCACTGATAGTTGTTGAGAATC 225732 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 225792 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 225852 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 225912 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 225972 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 226032 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 226092 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 226152 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 226212 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 226272 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 226332 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 226392 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 226452 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 226512 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 226572 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 226632 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 226692 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 226752 30 96.7 30 .................T............ CTCATCGTGAAGGTTTTGCAAATATGCCTT 226812 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 226872 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 226932 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 226993 30 96.7 30 ............................A. AGCACGAGCAAGTTCTTGAGATGCCAAAAA 227053 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 227113 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 227173 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 227233 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 227293 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 227353 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 227413 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 227474 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 227534 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 227594 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 227654 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 227714 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 227774 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 227834 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 227894 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 227954 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 57 30 95.6 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TAAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAA # Questionable array : NO Score: 5.35 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.31, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-21] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //