Array 1 2145974-2144816 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP029546.1 Lacticaseibacillus paracasei strain EG9 chromosome, complete genome		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
   2145973	    36	 100.0	    30	....................................	AACATTGGATAAGGTCGGCCACTGATCGTC	
   2145907	    36	 100.0	    30	....................................	TCAACATTCTTCGGATAGAACGATAGTGCT	
   2145841	    36	 100.0	    30	....................................	CTGATATTCATTATTCTCAACGTCTGCGAA	
   2145775	    36	 100.0	    30	....................................	ACCATAATTGTTTAGTTGCGCAACGTATGG	
   2145709	    36	 100.0	    30	....................................	CTCTCGCTGGGCGTGAATGTGTTTACTTGT	
   2145643	    36	 100.0	    30	....................................	CTTCCTTGAGAGCGATGCTCAGTGCGATCT	
   2145577	    36	 100.0	    30	....................................	CTTCCTTGAGAGCGATGCTCAGTGCGATCT	
   2145511	    36	 100.0	    30	....................................	CCGAAAGTGGTAGGTGAATATATTCAAGAG	
   2145445	    36	 100.0	    30	....................................	CCGAAAGCGGTAGGTGAATATATTCAAGAG	
   2145379	    36	 100.0	    30	....................................	GGTATCTGGCGTGAAACATGTTGCAAATAA	
   2145313	    36	 100.0	    30	....................................	GGTAGTTATCACATTAGCATTCAAGGGGGT	
   2145247	    36	 100.0	    30	....................................	AAGAATGGTCGGTATTACGAGATCCAACTT	
   2145181	    36	 100.0	    30	....................................	GACGTCTAGAGACTGGGGTGATCTGTGATG	
   2145115	    36	 100.0	    30	....................................	TCTCCCACTTGCGATAGGTCACTGGGGTCA	
   2145049	    36	 100.0	    30	....................................	GCGCTTTTTCAAGCTTTTCGGGGTTGCGAG	
   2144983	    36	  97.2	    30	..G.................................	ACCTACAGCGTCTTGTGCTTTGCGAATTTG	
   2144917	    36	 100.0	    30	....................................	AGCGCAAGGCAGGAAAAACGCGAGCGCCGT	
   2144851	    36	  88.9	     0	......C..............T..T..........T	|                             	
==========	======	======	======	====================================	==============================	==================
        18	    36	  99.2	    30	GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	                              	       

# Left flank :   AGCTTGATCTAGATAAACTTTTTCAACGTCTAATCTATAAGAAGATGGAGTTGCTGATTGAGAATCAGCGGCTTGTCGAACTGATCGATCAATCGCAACAAATGGCGATGGATTTACTCCAAGATCCATTCTTGAGCGACTTGCCAGTCACGGTTGAACCAGGCGGTAAGCTCGAACAAATCATGAAATACTGCAACGTTCATTTCGATGAGGCTGTCACGACAGAGTCAACCTCGAAGATTGAGGCGCTTATTCAAACGTTAACTAAACTAGGGGAAAAGAAACTTGTCATTCTTACAAATGTCAGTCATTATTTAAGTGCTAGAGATTTCTTTGCGGTGACTGAACAGATCGGCGATACAGAACTTCAGGTTGTTCTCATTGAGTTCTCAAAAGTGAACCGAAAGAAGTACTTTGAGAAATGCCAGTATATCTATATTGACGAGGACTTTGTTGATAGTCGCGAACTAGATTGATTAGGAGATTGTGTGAAAACACCG
# Right flank :  CAGCAAGAAATCAATATTGCTGAACAGAAAGCCTCGATGGCTGTTGTATTTTTTAGTCGAGTTACAAACGGTAACGGTACTTAAATGGAACAAACTTTGTCAAAAAGTGCCTCGTCTTTTGTGCCAAAAGTTTTTTCAATATTTTCTTGTGAAACAGAAATTAATATCTACCCAAGTTAATTCTTTCGACAGTCTGCCTAACAATTCCGTTTTGTATCAATAGTTTAATAACCGCACACAGTCGAACACTAATATATCAATCAAAAACTAAGTGCTATCTAACTCCTCTTGTGATAGAATTCATTATATATGAAATCGCTTACACAACTAGGAGGAAGAACGACATGAAAAAACTAATAGTGCTCAGTGCCACACTTTTGGTCAGTATGGGGTTGGCCGCATGTAGTAGTGGATCGAGCTCTAGTTCGAGCAAGAGCAGTAGTACGACCAGTCAGACGAGCAACGCGAAGGTCAAGATTAATACAGGCGCTGATGCGAGT

# Questionable array : NO	 Score: 6.22
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:55.56%AT]
# 	Reference repeat match prediction:         R [matched GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC with 95% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [0.00,-2.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [5-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [61.7-56.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.28   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
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