Array 1 5310-2779 **** Predicted by CRISPRDetect 2.4 *** >NZ_LABZ01000004.1 Methylobacterium tarhaniae strain DSM 25844 contig_4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 5309 29 93.1 32 ...CG........................ CCGCGAGATCGCGAGGCGGTCGCGGAAATCTC 5248 29 100.0 32 ............................. CCGCGAGATCGCGAGGCGGTCGCGGAAATCTC 5187 29 100.0 32 ............................. TTAAACCCCGAGCAGTTCGTTCCAGGGCACCA 5126 29 100.0 32 ............................. CACGAACCGGTAGGTGCATCGCCCGCCATCGT 5065 29 100.0 32 ............................. CCGGCCAGCTTCAGCACGCCGTCGGCGGTGAC 5004 29 100.0 32 ............................. GCGATCGAGGCCGTCACGCCCGCGCCCGCCCC 4943 29 100.0 32 ............................. ACCATTTCCTATACCGCGATCGGCGCCTACGA 4882 29 100.0 32 ............................. CCTCAGGAGAGTTCGACACGGCTTTCCCCGAT 4821 29 100.0 32 ............................. CGCGGACCCATGACGATCAACTAAGCGGCTGC 4760 29 100.0 32 ............................. AACCCGCTGCACGACGGTTTCAGCCACGCGGC 4699 29 100.0 32 ............................. CATGTAGCTTGCCGAGAGATCACGCAGCTGTC 4638 29 100.0 33 ............................. CGTCATCGGCGTGGCCGTCGTCATCGCGCCAGC 4576 29 100.0 32 ............................. CGCACCGGCTTCTGGGTCAGGGCCTTCACCTC 4515 29 100.0 32 ............................. CGGACGTCCTGCTGCGGGTAGATGTCTTCGCC 4454 29 100.0 32 ............................. GAGCACGGATTCACCCGGACCGCGCACGCCGT 4393 29 100.0 32 ............................. CGCCGGCAGGCAGTGCCGACCGCCCAGGCCGG 4332 29 100.0 32 ............................. ACCTTCCCTGTTCCGGTGGCCTGGAGCGACAG 4271 29 100.0 32 ............................. CACCCGGACGTCATCTACCTCGGCAATCGCGA 4210 29 100.0 32 ............................. CCCTTGACCTTCGTGCGGAACGAGCGCGGCCC 4149 29 100.0 32 ............................. GCGGCCGAGGCGCAGAAGGTGCTCGCCGGCGA 4088 29 100.0 32 ............................. GCGCGCGAGCTGGCCGAGCGCCACATCATGGA 4027 29 100.0 32 ............................. ATCGCATCGGACAACGCGTTCGTCGCGATATC 3966 29 100.0 32 ............................. CACTCTCAGCGCAAGGCGGGCCTCCCTCACAC 3905 29 100.0 32 ............................. ACGTGGCCGGCGATCGAGCCGAGCGCCTGGCC 3844 29 100.0 32 ............................. GGCGATTCACGTATTGAGGCAGCCTATCTAGA 3783 29 100.0 32 ............................. GCGATCCCACAGAACAACGCGCTCGCCAACGC 3722 29 100.0 32 ............................. TGACGCACGCCGTCGAGCGCGGTCGAGCCGAG 3661 29 100.0 32 ............................. CCGATGCCATTTGCGGCAATGAACTCGTGATC 3600 29 100.0 32 ............................. CCTACGCAGAGGCGATCCAGTCCTGGCCGAAC 3539 29 100.0 32 ............................. CGCGCGACACGGCACGGTCGCGGGCCGCTGCC 3478 29 100.0 32 ............................. ATCATATCGCGCCTTTCCGGACCGGCGGCGCT 3417 29 100.0 32 ............................. GGCGTCAGCCCTAATTCGGCCGGCAGGGTCGG 3356 29 100.0 32 ............................. CTGTATTACAAAGACCCTCTTGTGGTCCGACG 3295 29 100.0 32 ............................. GTCTACGACACCGAGAACCCGAGCCGGCGCCA 3234 29 100.0 32 ............................. GTCTTCTTCGTCACGTTGAACTTGGCGAAGAG 3173 29 100.0 32 ............................. ACCTGGACGGACTTCTTGAGCCCATCGCTTAG 3112 29 96.6 32 .............C............... GCCTCCTCCTCGGCCTCGCTCAGGTCGGAGCG 3051 29 100.0 32 ............................. CCGAAGAGGACCGCAGCATGACCGCCGGAGCC 2990 29 100.0 32 ............................. ACGTACCGCGTCCAGGACTTCGGCACGGGCGT 2929 29 100.0 32 ............................. CGCGCGGCATTCCATTGAAATCGCGGGCAAGA 2868 29 93.1 32 ........................G..T. ACCGGGCGGCGCACGGGGTCGTCGAGATAAGC 2807 29 89.7 0 ........................G..TC | ========== ====== ====== ====== ============================= ================================= ================== 42 29 99.3 32 GTGTTCCCCGCAGGCGCGGGGATGAACCG # Left flank : GCGGCGGTTCGGCTGCGGTGTCTGTAGTTGTTTTTCCCTGCGGGCGCGGTGATCGCGCTGAGGGCTGAGCGCGCCGCCGGGCCTCCGCCC # Right flank : TTGCCAGCCTTGCCGCCCCCCTGCTACACGGTCGCCCACAAAGATCGATCTAACCAATTGATTTCATTGACGATGATGGCGCCGCCAGGCAGGCGGCCGCCGGAGGCGCGAGGACAGGTGACAGCCCAGACCCCTTCCCCTGCCGTGCCTCGCCGCACCCTGCACGCCTCGCTCCGCCTCGGGCGCGGGCGCAACGTCGTCCGGGACTTCGCCCGGCTGCGGCTCGAATTCGGGGCCGAGGGCCTGAGCCTCGACGTGGCGGATCTCGGGCTCGGCGGGCGCTGGGTCAGCATCGCCTTCAAGGACGAGAATCACGGTGCCTTCAGCCGGGTCGAGCTGACGGCGATCGCGGAGGGGCCGGAGGGGCCGCAGGGCACCAGCCTGTCCGAGCGCGCCTTCGGCCACGGGCGCTTCACCTGGCTCGGGCGGCTGCCCGCCGGCACCACGGCCTTGCGGCTCACGCCGATGCTCGGCGAGCCGGGCTTGAGCATCGCCGAGTT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCAGGCGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCAGGCGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [41.7-21.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 8985-6758 **** Predicted by CRISPRDetect 2.4 *** >NZ_LABZ01000076.1 Methylobacterium tarhaniae strain DSM 25844 contig_76, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =================================== ================== 8984 29 100.0 32 ............................. GCTCAACACCGGTAGAAGTGCCGGCCAATATC 8923 29 100.0 32 ............................. AAGGCATGACGGTTCACGCGATGGTCGCGGCA 8862 29 100.0 32 ............................. CCGCCTCAAGCTGATTTTCGTGCAATTCCACG 8801 29 100.0 32 ............................. CGAAACAGTACGCTTGGCGGGTTTGCGGGAAT 8740 29 100.0 32 ............................. TTGAGCATCGCCTTCATCTGCGCCACGGCGGC 8679 29 100.0 32 ............................. GCCGCGCAGATCACCGGAATGCTCAACCCGAT 8618 29 100.0 32 ............................. AGAAGCGAGCCCGGCGAAACAGCGCGCCCGGG 8557 29 100.0 32 ............................. TCGGCCGCCTACGCCCGTTCTGAGGCGGCCGG 8496 29 100.0 32 ............................. TTCAGGGCCGCAGCGTTGCAGGATGGTGCCCT 8435 29 100.0 32 ............................. CCTTGCGTCGCCACGCCGGACGGGGAGTGGCT 8374 29 100.0 32 ............................. ACACGGAGGTGACGGTTGAGAGCCTGATCCGT 8313 29 100.0 32 ............................. TGCAGGCTGTGCACGAGAGCCAGGCCGGGCTC 8252 29 100.0 32 ............................. AACCCGCAGCGGCTCGGCCCGATCACGCTGTC 8191 29 100.0 32 ............................. GTGCAGACCGAGTGGGATGGCCGCCTCGTCTA 8130 29 100.0 32 ............................. CCCGGGCGCGGGACGCTGCCCTGGCCTTCGCC 8069 29 100.0 32 ............................. CCCATCTTGGACGCCTTCAGCAAGGCGTGCTC 8008 29 100.0 32 ............................. CCGACCTGCTGGTTCGCCGCCGTGCCGTAGAT 7947 29 100.0 32 ............................. GTGATCTTGATGGCCTCGTTGTAGCCGATCAC 7886 29 100.0 32 ............................. CCGGTCACCGGCTTGCCGGAGGCGCGGGTATA 7825 29 100.0 32 ............................. GCCTGGGGCCTCACGGCGGCGAAGGAGCGGTG 7764 29 100.0 32 ............................. AACCGAGCCGCGCCGGCACGAGCGTCAGCGTA 7703 29 96.6 32 ............................A GTCGAGCAGCCGGACATGATGCTTCTGCGGGA 7642 29 100.0 32 ............................. TGACCACGTTGTAACGTGGAGACGTGGACAGT 7581 29 100.0 32 ............................. CCGGCGGACGCCCGCGCGGCCATCCCCGATCC 7520 29 100.0 32 ............................. ATCGGCAGCACCGGGGTGATCAAATTCCCGCG 7459 29 100.0 32 ............................. GCGCCGAACGCCGTCGGCGCCTTCCACTCCGG 7398 29 100.0 32 ............................. ACGGGGCGCTTAGCGGCCTCCTCGATCCCCTC 7337 29 100.0 32 ............................. TCCGTGGGCGAGCCGGCGTAGGCGACCGTGAG 7276 29 100.0 32 ............................. CCCGGTCCGCCGGGCCTCGGGCCGTTCCTCGG 7215 29 100.0 32 ............................. TCGGTGACCGGGTGAAGGTCACGTCTCAGTGT 7154 29 100.0 32 ............................. TAAACCCCGGCGTCTAGTTAGGCGCCGGGGAG 7093 29 93.1 32 .................A.A......... ATCAGGCGCCCGTCCCATTCGGTGGTCGCCTG 7032 29 100.0 32 ............................. ACGGAGGAGTAGCCATGCCCATCCGTAGAGAG 6971 29 100.0 32 ............................. GTAGTGCAGCGACACGTCGAGGTCGCCGCGGT 6910 29 100.0 32 ............................. CGGGGGCCGAGCCCGTCGCCGGGGTCGATCAT 6849 29 96.6 35 ............................A CCGGCGCAGAGAAGGCGGGGCACCTTCGGCCCGCC 6785 28 79.3 0 ....-...G....TT.......C..G... | ========== ====== ====== ====== ============================= =================================== ================== 37 29 99.1 32 GTGTTCCCCGCAGGCGCGGGGATGAACCG # Left flank : AGGGCACGGTGCCGACCCGCCTCGCCGAGGAGAGCCGGACGCTCCGCCTCGCCCGGGTCGAGGGCGACCGGCTGGTCCCCTGGCACCCCGCTCCCGACCTCCGCCTGGCCTGGGCCCTCTCCGAGGTCGCGGTGGCTGTGCGCAAGCTGCGCGGCCACCACGCCCCCGCCCCGTCCTGGCACGAGGCCGCCGCGGCGGCCCGGGCCGGCTGGAGCCGCTTCGACGACGCCGTGATCCTGCTCCCCCTGGAGCCCGTGCCGGACGGCACCTGGCAGGGCACCCTGGTGGCGGAGGATGGCGGGTCCCTCGTCCTGACCTACGGCACGCGGCTCGGTCTCATGCTCTGAGCCCCGGCCCGACGAAGTCTGGCGTTGGGGGCCGATCCGGGGCATCACTGGGCCCATCCGGGATGCCGAATCGGGCCGGCGGAACGGAGCGGAAACGTCGGTGCGTTCTTTGATATCGTGAAAGGTGAGGCGTATCAGGCGCTTCCACGAAGA # Right flank : CGCGCTCCGGCGACCTCGCCTCCTCTTCCCCCACACCTTCCCGCGCCCGCCGAAACCCGCTACCCCTCGGGACCATGCCGACCGAATCCCCCTCGCCCGTCACCGTCGCCGCCGGTTCCGTCCGCTTCGGCAACCACCTGCCGCTGAGCCTGATCGCCGGCCCCTGCGCCCTGGAGGGCCGGGGCCACGCCCTGGAGGTTGCGAGCGCCCTCAAGGAGATGACGGCGGCTCTCGGCCTCGGCCTCGTCTTCAAGTCCTCGTTCGACAAGGCCAACCGCACCTCGGTCGGGTCGAGCCGGGGGATCGGCTTGCGCCAGGCGCTACCGATCCTCGCCGAGATCCGCGAGACCCTGGGGCTGCCGGTCGTCACCGACGTGCACGAGGCCGGCCACTGCGCCGAGGTGGCGCAAGCCGTCGACGTGCTGCAGATCCCGGCCTTCCTGTGCCGGCAGACCGACCTGTTGCTGGCCGCTGCCGCCACCGGCCGGGTGGTGAACGTC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCAGGCGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCAGGCGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [23.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 508-52 **** Predicted by CRISPRDetect 2.4 *** >NZ_LABZ01000075.1 Methylobacterium tarhaniae strain DSM 25844 contig_75, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 507 29 100.0 32 ............................. ACATCTACACCGAGGCGAAGGGGCGAGGCTTC 446 29 100.0 32 ............................. GTCAGCGATGACTTCGGCCTCGGCGCTGATGA 385 29 100.0 32 ............................. CTCTCCGCACCTCGGCCCTCGCCTCGTCGCTG 324 29 100.0 32 ............................. CCTTCAGCCAGACTGCCCGACCCGACGCAGTC 263 29 100.0 32 ............................. TCGTCGGCGATCCGCGGCTCGTGGCCGGGGAA 202 29 100.0 32 ............................. TTTGTTCTTGTTCCGTTCTCTCTCTGACGGCA 141 29 100.0 32 ............................. TGGCCGCCGTTCCGGGTCGGCGGGTTCGACTC 80 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 8 29 100.0 32 GTGTTCCCCGCAGGCGCGGGGATGAACCG # Left flank : AAGCATCGAGGACGTGCTGGCCGCCGGCGGCCTGCCGCCCCCGGGCGAGCCCGCCGACGCCCAACCCCCCGCCTTCACCGAAGTGCCCTCCGGCGACGGGGGCCATCGCGGATGAGGATCGTGCGCCGATGATGGTCGTGGTGGTCGAGAACGCGCCGCCCCGCCTGCGCGGCTGCCTCGCGGTCTGGCTCGTCGAGGTGCGGGCGGGCGTCTATGTCGGCCACTATTCCCGCCGCACCCGCGAGCGGATCTGGGCCGAGGTGCAGGCCGCCATCGGCGAGGGCAACGGCGTCATCGCCTGGACCGCCCAGACCGACTTCGGCTACGCCTTCGACACCTGCGGCCAGAACCGCCGCATGCCGGTGGACCTCGACGGCCTCCCCCTGGTCGCCTTCCACCCCGACGAGACCCCGCTCTGACCGGGTCCGGAACGGAGCGGAAACGTCGGTGGGTTCTTTGACATCGTGAAAGGTGAAGCGTATCAAGCACTTCCACGAAGA # Right flank : GCATGACGCAACGCGCTCCTAGTGCTCGGTCTTGTGTTCCCCGCAGGCGCGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCAGGCGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCAGGCGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [28.3-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 7842-7447 **** Predicted by CRISPRDetect 2.4 *** >NZ_LABZ01000075.1 Methylobacterium tarhaniae strain DSM 25844 contig_75, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 7841 29 100.0 32 ............................. CGCGCCGGCTTTTGAGCGCGTCGCGCGCCTCG 7780 29 100.0 32 ............................. CGGGATGCCGTTGTCACGAAGCTCGGCCAGGA 7719 29 100.0 32 ............................. TTTTACGGTGGCGTTGGCCTCAACCAGACCAC 7658 29 100.0 32 ............................. CCGTTGACCATCGTCACCACGGCGATCGTCAG 7597 29 100.0 32 ............................. CCGCCCGGGGTGGGCTTCAGGAGAGCCTTGAT 7536 29 100.0 32 ............................. ATCATCGACACGCTCCTCAGTCGGATCCGCCA 7475 29 96.6 0 ............................A | ========== ====== ====== ====== ============================= ================================ ================== 7 29 99.5 32 GTGTTCCCCGCAGGCGCGGGGATGAACCG # Left flank : GCCCCGGCACCAGGAACCAGGGCTCCGCCCGCTCCGCCAGGCGCAGCGGAAAGGCCGGGCCGCTGCGCCAGGCCTCGACGAGCCCGAGCAGCGACAGCCCGACCAGCGAGTTGCACAGGAGCGCCCCGGTCAGGCCGGTCCCCCGGGCCACGATCGCCCCCATCAGCGCGTTCTGCACCACCAGGGCCGCCCCCGCGACGAGGCAGAGGAGAGCCGCGCCGGTCATCGGGCGGCCCTCACGGGGTGGAAAGAGGGCGTGGCGTGGGCTGGCATGGCGCGGCTCCTGTCGTGCCGCGATCATCTCCTATGATAGACGATTGTCAAATATCGGAAACACAGCGGAGGCGACTGCGAGCCGCTTTCCGGGTGATCGGAAACCCGCTACGTCTGTCCGGGGACCGGTTCCGGCGGGCTGCACGCCCGCCCGGGAACGGACCGTGATCGTCGGTGCGCTCTTCGACATCGTGAAACGCGAGCCGGATCAATGGCTTCTCGGAAGA # Right flank : CCGCCGAGCCGCACCGGCCGCGCCCGGCACATGCTGGTCGGCACTTGGTACGATGTCACCGTCGTCGTGGTGATCGTCTCGCAACCCGGCGCGGAGGCGACGAGCCGCGTCAGCATCCGCCGAGCCGACCGCAATGAGGGGGCTGCCTATGACGCACTCCGCTAAGCACGCGCCCGGCTACGTGCCGAACCCGCACTACACGCAAGACGATTGGGACGAGGTGTCGGACACTCCCCCGCTGACACCCGAGGAATCGTCCCGGCTGCGGCTCGGGCCGGCCGATCTGCCGCCGGATCTCGCCGCCCTCAAGAGCCGCGGCGGGCGCCCGAAGGCCGCGGTCAAGCGCGTGCCGATCTTGCTGCGCGTCGAGCCCGAGGTGCTGGCCGCGTTCAAGGCTACGGGGCCAGGGTGGCAGACGCGGATGAACGAGGTGCTGGCGGAGGCCGCGCGCCGGCTGACGGCTGCGTGAGGCGCGGCACGGCACGGAAAACAGAATTCCA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCAGGCGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCAGGCGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [26.7-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 6134-7443 **** Predicted by CRISPRDetect 2.4 *** >NZ_LABZ01000169.1 Methylobacterium tarhaniae strain DSM 25844 contig_169, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 6134 29 100.0 32 ............................. CCGGGCGGCGGGGAGAGCGAGGCCGTAGGTAG 6195 29 100.0 32 ............................. ATTAAAGCCATGATCGAGCAGGCCTTGCCGCA 6256 29 100.0 32 ............................. TCCTGTCGGCGTTCCCGTCCGAGGCTGGTGCG 6317 29 100.0 32 ............................. ATCGGCGCGGCGTTCGACAACGAGGGCCGGGG 6378 29 96.6 32 ............................A GCTTATCCGGGAAGAGGTACAGGAGCTTGAGG 6439 29 100.0 32 ............................. GGGTTAGGCGGCGCCGCTCATCGGCGAGCTTT 6500 29 100.0 32 ............................. CTGTGTTCTGGAACCGCGACATCAGGTGCGAC 6561 29 100.0 32 ............................. CTTGCGGATCAGGCCAAAATCCACTCCAGCCG 6622 29 100.0 32 ............................. CGCCGGGCTGATTTCTAACCTTTTGAGGGTGA 6683 29 100.0 32 ............................. CCGGCGCGACACAACAGGCGGCCATCGCCACG 6744 29 100.0 32 ............................. CGCGGGTTCTACCGGCAGGCCCAGGTGCAGGC 6805 29 100.0 32 ............................. GCGGCCACATCGGCCGGGGTGGCGCCGGAATT 6866 29 100.0 32 ............................. CCCTCTTTTCCCCCAGACTAGTGCGCTAACCG 6927 29 100.0 32 ............................. GCGGCACTAAAATGCTACCTCGGAGTTCCATT 6988 29 100.0 32 ............................. ACGCCCGTCGCATCGCCGACAATGCCGAGATC 7049 29 100.0 32 ............................. TGCTCCTATAGAGCCACTTAAGTAACAACCTA 7110 29 100.0 32 ............................. CCCGCCTGCGCGAGGTCGCTAAACCAGCGCCC 7171 29 96.6 32 ..................A.......... AAGAGAATCCCTTGATCCCCGTGGAGGGAGTC 7232 29 100.0 32 ............................. CCACCACGGCCTAAGAAGCTCGGCGGCCTTGA 7293 29 100.0 32 ............................. CGGCCCTCCGGGTAGTAGGTCCCGGAGGTGCC 7354 29 100.0 32 ............................. CTCAAGGGCGAGCATCTGGCCGCGGTGGAGGA 7415 29 96.6 0 ............................A | ========== ====== ====== ====== ============================= ================================ ================== 22 29 99.5 32 GTGTTCCCCGCAGGCGCGGGGATGAACCG # Left flank : GCCCTGCTCGGGGCCGGGCCGGCGCGGGCGGACCTGCGGATGTGCAACATGACCGGCAGCCGCATCGGCATCGCGCTCGGCTACCGGGATTCCGGTGGCTGGGTGACGGAGGGCTGGTGGAACCTCTCCGCCAAAGGCTGCGAGACCCTGCTCAAGGGAGCGCTGGCCGCCCGCTACTACTACGTCTTCGCGGTCGATTACGACCGCGGCGGCGAGTGGAGCGGCCGCTCCCTGATGTGCACCCGCGACCGCGAGTTCACCATCCGCGGCGTCGAGGATTGCCTCGCCCGCGGCTATGACCGCAACGGCTTCTTCGAGGTCGATACGGGCGAGCAGAAGAGCTGGACGATCCAGCTGACGGATCCGGGCAGGGCGGGGCCGTGAGGCGGGTTGGAGGGGTGGGGGTCTGGGCCGGTTGAGGCGGCCCAGAACGGGTGCGGAACGCCGGTACGCTGTTTGACATCGTGAAACGCCAAGCGCATCAATCACTTCCAGAAGGA # Right flank : ATCCCGCAAAATATCCTCGATGTGCTCCCCACCGATGCACGGAACAAGTGCATCAACGGCTCAAGCCACCCGCAACTGCCGGGCGGTGACACGACGGCGAGGACGACGGTTTCGTCGTTCCAGTGGCCGATGAGGTTGAAGCGGGGCCTTCCCGTTGCACTCGGCCGTGTCGGGGCTCCATCGCACGCTCGCGGTCGAAGCAGCGCCAGAAATCGGCGAAGTCGTGGCCATGCTTCGCGAGGTGCGCTTGGCGCTTCAGCTCGTTGAACATGATCGTCACGGTTTTCGTATCTACGACAATCGCGCCGGACGAGGATGCGCGAGTCCGCCCGATCCTGCCCCCGATCCTAACCCCATCGTCCGCCCCCTGCCCGACGCCAAAACGCCAATTGACCCGGGCCCGCCGACCGGCTTTCCGTACGGTCCAACCTCCGCCCATCGCTCATCCCCGGACGACACCCCATGAAGCGCGCCCGCCGCACCAAGATCGTCGCGACCCT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCAGGCGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCAGGCGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //