Array 1 132346-133838 **** Predicted by CRISPRDetect 2.4 *** >NZ_PKKN01000008.1 Winkia neuii strain UMB0125 .16933_8_7.8, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 132346 29 100.0 32 ............................. TATTGAGGCCGGGGGGATTTTACCTGCGTCCC 132407 29 96.6 32 ............................T GAAATCCCAGTACGAGGCGCAGGCTGAGGCGG 132468 29 100.0 32 ............................. CAAGCGTACCAAGGGCAAATCAATTTCTTAAC 132529 29 96.6 32 ............................T AATGGCATTAGATAGTAATATGTCCCTATTAT 132590 29 100.0 32 ............................. AGTGCGAGGCGTAAGCCAGCGCAAGCGTTGGG 132651 29 100.0 32 ............................. GGTTAGCCCGGCAATGTCAGCGGACCCGGGGG 132712 29 100.0 32 ............................. TGGTTCTTGTTTGCCATTTTCGGATTCCCTTT 132773 29 100.0 32 ............................. GCACGCCGTCCCTATGGTGGGCGATGGAGTAT 132834 29 100.0 32 ............................. CACAATGGTTCAACCCCCCACTCTACTCTTAT 132895 29 100.0 32 ............................. GAAGCTCCTAGAGCGATTCAATTTGAAGGAGA 132956 29 100.0 32 ............................. TAGCAATGTGCATCAATTCCGCCTACAAACAC 133017 29 100.0 32 ............................. GCTCGCTTTGGTCTTTATTTCCTCAAAGTATC 133078 29 100.0 32 ............................. GCTCGCTTTGGTCTTTATTTCCTCAAAGTATC 133139 29 100.0 32 ............................. ACGCTACCTTACCCGGCAGGATTTGAGCCCAA 133200 29 100.0 32 ............................. GCGGAAACCGTAACCTTTGTTTCCTCCCCACA 133261 29 100.0 32 ............................. CCTACGTTGGGGTAGATCCGGGGCGGGGGCAC 133322 29 100.0 32 ............................. AACATGGACTCCGACCTATGCCTGTCCAACCG 133383 29 100.0 32 ............................. CGGTTTAGCATTCAACAATATGCTGTTGGCAT 133444 29 100.0 32 ............................. CTACAGGCGGCAGGCGGGGATGTGCTGCTTAC 133505 29 100.0 32 ............................. GGGCCGCGTATGCTATGTATAAAAAAAGTGTC 133566 29 100.0 32 ............................. TGGTCTAATGAAAGCCTTTGGAACATGGTTGC 133627 29 100.0 32 ............................. CGGCACCGCGCTGGTACACACACCAAGGAAAG 133688 29 100.0 32 ............................. CTTTCGGTTGTGCGCGTGCCAGGCTGGGCGGG 133749 29 96.6 32 ............T................ CAGCTACAAAAGACTCTCAAGGGACTAAGCGC 133810 29 93.1 0 .C........T.................. | ========== ====== ====== ====== ============================= ================================ ================== 25 29 99.3 32 CTTTTCCCCGCGCGAGCGGGGGTAATTCC # Left flank : AGCAAGGACGGTGCCACAGGTACCGACGAGGGTGGCAACGCTTCTGACGAGGGCGGCCACGCTTCTGACGAGGGCGGCCACACTAGCGATCCTGGCGCGCAACCCGGCACCCAACCTGGTTCGCAGCCTGGGGCAAAGCCTGGTTCGCAACCCGGTGCTCGGCCCAGCGGCGAAGGCAAAAATGCTGGGGGCAAAAACGCCGGCAAGTCTGATGCGGGACGGCAAGCGGGTGAGCCAAAAACAGTCGGCTCGTTCTTAGCCACAACTGGAGCGACAGCTTTAGTACCCACCCTGCTAGGAGCCATGGCAATGATTAGCCTGGGCGCAGTTGCAAAACTAAGCCGCAAAAAGAACTGACCGAGGCTAGCGTCAGAGGCTGAGCTGGAGAACTTAGATGGTGCGTTACTAGGTATAGATACGCGCCTTGCATGCGCCAGACTGTAAGATAGCTACCAGCATGGAAGAATGATATAGACGCCCAAAAGCGCAGGTCATTTAGT # Right flank : CTGGGAAGTCTCGCTATATGGGGCGGACAGGTCCTTTTACCCGGGAGAACAAAACAGGGAGAAATTTCGGTAAATGCTACTCGAGGGCTGTTCAGCGGCCAGTTACGCGTAACTCAGATACATGTAGGAATAATCGTTTAATATATCCTAGCCGTTTCTGTAGCTGTTGCATTTAGTTGCAGTAGTGGCCATTCTTATCTACACCTAACCGTATTGGTTTCAGGCTATTTAAGGATATTCCCTGTCGTAAGTTGCATGCCCTGTGATTGATCAACGTAGGGGCCGCGTCAGCAACCATTCCTGAGTCTTTTAGGCGTTAGAGCTGCAGCTTTTCCTTCAGACTTGCGTACCATTGTTCTCGTGTGCCAACAGTGGTGAATTGCTGGCGTCTAGGTGCTAATTCCTGTCCGGGAACATAGTCCTTTATAGTGGCGAACCGTTCTTTTGAGTTGCTGTTCGTTACGAATAGTGGCAATTTCGCGAAATCTTTTGTGGGACCT # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTCCCCGCGCGAGCGGGGGTAATTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.80,-12.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [56.7-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA //