Array 1 416824-419428 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABFLX010000011.1 Campylobacter concisus isolate Campylobacter_concisus_BgEED07, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 416824 30 100.0 34 .............................. CCATCTGAAAGGAGTTTATAAGGGGTATAGAAAG 416888 30 100.0 36 .............................. ATCCGCTTGTGTTACCTTTGTTCTGCCTTGTTTTGG 416954 30 100.0 38 .............................. TTTAAGCTTAATTCAAACAAATGCAGATAGCGAGAAAA 417022 30 100.0 37 .............................. TCTTTTACGCTTATCTTTTTATCATTAAGCGGTTCTT 417089 30 100.0 35 .............................. CCTGCACCTATACGCATTTCGGATTTTGGGAGAAA 417154 30 96.7 35 .......C...................... GCTAGTATTTTCAATGAAAGGTTTAATTGTTATGC 417219 30 100.0 35 .............................. TTTTACTACGGCAACAACAATATGCCAACGAAAGA 417284 30 100.0 34 .............................. GTAAAATCTATTTCATTATCTACCATTGTTTTTC 417348 30 100.0 35 .............................. GCAAGGGGTGTTTAAACCAAAGCCAACCTACGGAG 417413 30 100.0 34 .............................. AACAATTTCCTTACCTTTTTTCGCAATTGTATCA 417477 30 100.0 37 .............................. AGCCTACAAAAGCTTTGCTACTAGGCTCTGCTGTGCA 417544 30 100.0 35 .............................. TGAAAAAAGAGATGGGGTATGGGGTGCAAACCCCA 417609 30 100.0 36 .............................. AGGGTATCGTCACCATATCCGCCATTACTCCAGTCA 417675 30 100.0 40 .............................. GGGATCATATCCTTAAAATTTGGGACTGAGTTTAACGGAA 417745 30 100.0 36 .............................. TGATCTCAAAGCTAAACCAAATCGTGAAAAATAGAG 417811 30 96.7 37 ...............A.............. TATTTGGTATCCCTTACGCCACGTTAAACGACTGGGC 417878 30 100.0 36 .............................. GCCAACTAAAACAGCATAATGAAAAGATAGTTGTTT 417944 30 100.0 35 .............................. CCAATAACAAAGCTCAAAAATAAGATAGCCCCTTA 418009 30 96.7 36 .........................T.... TTATCTCTCTTTGTGTTGGTATGCGATCGCCACTAT 418075 30 96.7 36 .........................T.... TTGTTACTCCTTTCCACGACTAGACTTAGATGCATG 418141 30 96.7 35 .........................T.... TGAAGTGCTTTTATAAACTCTTGGCTTATAATCAA 418206 30 96.7 35 ...................C.......... GCAAACTGGCAAAGACGAGTTTATCAAACAAGCCG 418271 30 100.0 35 .............................. GCAAACTGGCAAAGACGAGTTTATCAAACAAGCCG 418336 30 100.0 37 .............................. CAAACAACTCTAGCGGAGAGAGTGGCAACCCTTCAAA 418403 30 100.0 36 .............................. AATTATTGCTTTGGTAATAGTTGCCCTTGTTCTAAC 418469 30 100.0 38 .............................. AAATGATAAGCGGCTTTATGGGCGTTGATGTAAAAAAC 418537 30 100.0 36 .............................. TCAAGCCGTTCAAGCTCGCACTTATACTGATGAAAA 418603 30 100.0 36 .............................. CAAAACAAGAAGCCAGCCAAGCACCAAAAGCTGGAC 418669 30 100.0 36 .............................. TTTACAAAGCGAGCTTACTAAATTTGATGTATCTGT 418735 30 96.7 35 .............T................ AAAGCTCAGTATCTAGCAAGCGATCTAAAAGCTTT 418800 30 100.0 38 .............................. CGGTAATTTTGCAAAATCCTCTACCGATTGTGTTCCCA 418868 30 100.0 35 .............................. AAAAGCGAACTTTTCTTTGATATCCCTAGTTATTA 418933 30 100.0 35 .............................. GTGTAAATCCGTTTAAAAGGGTGCGAAATGAGCGA 418998 30 100.0 37 .............................. AAACTCTTGATGATTTACGCCAAAACCCTGACTTGGA 419065 30 100.0 37 .............................. TTTCGGCACGTGCTAGGTCATAGTTCAAACTCATTTT 419132 30 100.0 38 .............................. TCGTTATAGTCTTTGTTGTTAAACGTATCTTGAGTGTG 419200 30 96.7 36 A............................. AAGAGCGCCTAAATAATCCATTTTAACCACCTTGTA 419266 30 100.0 36 .............................. GCTGGCATACACTTCATAACGAAATTTCTTTGAAAA 419332 30 96.7 37 .......G...................... GCAATGTTTTATGATGATAATGGCAAACCAAAAATTA 419399 30 96.7 0 ......................T....... | ========== ====== ====== ====== ============================== ======================================== ================== 40 30 99.2 36 GTTTCAAACTCCAACGGAGTAAATTCTAAT # Left flank : TGATATTAAAAAAGCAAAAGAGATTTTAAAGGATTATAGATGAAAGAAGAATTTACAAAATTTAATTTAGAAGACTATTTAACAACTGATGAATTAAGAAAAGAGTATTTAAATCAAGTTTTAGCCGATGGCGATATTGAAGAATTTAAAAGAGCATTATTTTATATAGCAAAGTCAAAAGGCATTGAAAACGTTGCAAAGAAAGCAAATTTAAATAGAGAAAGCTTTTATAAGATGTTTAAAGAGAATTCAAAGCCTAGATTTGAAAGTATATTTAAGGTTGTGAATGCTCTTGATATTAAGCTTGTTTATGCTTAGTCTATTTCATTATTATTTCTAGCTTCTTTTTTGCTGTATTGGCTGGGGTTTTGGCTTTTTGAAGTATCTATATAAAACAATATTATCGTTCGTTTGATAGATCTTTGCAAGATAGCAACTATATTATTTAAATCTCTTCTTTGAAAATCTTTGGCTTTTAAATTTGTCACTTTATGTCGTGT # Right flank : TAGCACCAAAAAGCCTATTTTATAGGCATTCTAGTGCAAGAAGTCTATATTTTTTCGCCTTAAATTTGACTAAAATTTAGCCATGTACAAATACGCCAAGCCCTAAATTTCAAGCATTCTAAAATCTTAAAAAACGCTTTATTAAAATGCGATTTCACTCCCACCTAAAGCCTTCATAAGGCGCGTCCTCGCAGATGCACTTTTTAAGCTTGTTTGCTTCGCGGAGGATCACCTGCCTCCACGTTAGCTCCCTACCGCCCACCGTGAGCGTTTCGCAAAGGCGCGAGATCATCTTTAGCTCGATCTTTTGCACGGCGTCGTTGCTAAATTTTATCCTGCCGGCGTCCGTTTGGAAGTCCTTTGCGGTGATCTCTTTTTTATTTAGCATGTTAAAAATCAGCGTGTCGCCCAAGATCGGCTTAAAAATCTCCGCAAGATCGAGGTGTAGGCTTAGTGCGCGGTAGTTTGGCTCGTGCAAAAAGCCGATGCGAGGATCTAGC # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAAACTCCAACGGAGTAAATTCTAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.70,-4.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0.37 Confidence: LOW] # Array family : NA //