Array 1 15205-16006 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_PNPP01000009.1 Listeria monocytogenes strain V2106 V2106_contig000009, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                      	Insertion/Deletion
==========	======	======	======	=============================	=====================================	==================
     15205	    29	 100.0	    36	.............................	TTCATTACAATACGGATAATATTCATGTTCATATTG 	
     15270	    29	 100.0	    35	.............................	TCGCTTGTGTATAAACACAAGTCTACCGCAACACC  	
     15334	    29	 100.0	    34	.............................	TAACTTAAATAAGCATAAGGAAATGCCGCGCATG   	
     15397	    29	 100.0	    36	.............................	GTAGCTAGCCCTTGCGGTCCAGATGGCGCTTTGCCG 	
     15462	    29	 100.0	    36	.............................	ACAGTCGCATACTTAGCAATTCTTTTCATGCTATCC 	
     15527	    29	 100.0	    34	.............................	AGATAACGGGGAATTGGTACACGGATACTTTGTC   	
     15590	    29	 100.0	    35	.............................	CTATTTTTATACGTTTTAAAATGCCAGTTATCAGT  	
     15654	    29	 100.0	    35	.............................	TTGCTTCCCAACGAGCTAAATTTGCGTTAAATCGG  	
     15718	    29	 100.0	    35	.............................	CTCACTTCCACCACCTCGCATTCTGTGTTTGTTTC  	
     15782	    29	 100.0	    35	.............................	CAAGTAACAGGAAAAGGACAAGTATATCTATTAAA  	
     15846	    29	 100.0	    37	.............................	TACAACATGAGCTGGCTATTCTCTTCTGCTGAAACAG	
     15912	    29	 100.0	    36	.............................	CCTAATACACCTAAACTACTCTTATATATAAAAACA 	
     15977	    29	  93.1	     0	.......................A....C	|                                    	C [16000]
==========	======	======	======	=============================	=====================================	==================
        13	    29	  99.5	    35	GTTTTAACTACTTATTATGAAATGTAAAT	                                     	       

# Left flank :   CATTTAAAATTTGGTGGTGAAGGTATGTATGTAAATTTAATTTATGATATTTCAATAGAAAACGGTGGGGCAAAAGTCTGGAGAAATGTATTTAAGATTTGTAAAAAGTACTTAACTCATGTTCAAAAATCAGTTTTTGAAGGTGAAATAACTCCAGTGCTTTTAGTTAAGTTAAGGATGGAGTTAGATAAGTATATTCGAGATGATAAAGATTCAGTAATTGTTTTTTCTAGTAGACAACAAAGATGGCTAGAAAAAGAATTTTGGGGATTAACGTATGAAAAGACTTCTAATTTCTTTTGATGTTCTCGGTCTGTCGACCTTTAGTAGTGCGAAAAATAGTGGGGTTCGACAAATTTTGGGAAATCATTGGGGGAGAAAGAGTTTGAAGTTTTTAAGTGGAAATCTGAAGGGATAAGTTATGATTTTTACGTAATTTTTAAGAGGTCGACAAAAGTAGTGACCTGAGTTATGATGGGAGTAGGCGTAAAATAGAGCGG
# Right flank :  CGTCTTCTTAAAATTTAAACCCAAAAAATAAAAAGGCCAGGACCCAAATCCAAGACTTTTCCTACACTCCTCTAAACCAACAAAACCGCAACCAACGCCACAACCGCCGGCAAGCCCTGCTTCACTAAAATCCCCTTTGAAGAAGTCGCCCCTCCAAACAGCGCCGCCACAACCACACAACTCAAAAAGAAAATCTGCACAGTTTCAGCAAACCCTGCACCTGCGAAAAACAATCCCCACACAAGTCCTGCCGCAAGAAAGCCATTATAAAGCCCTTGATTCGCAAATAGCGTCTGTACTTTCTTATTCGCAAGTAGTTCCTTCTCCACACCAAATGTCTTGGCTGCGAGTTTGGTATTGGCGAAAAACATTTCTAAAATCATTATATAAATATGCTCGATCATTACGATGAAGGTTAAAATAAATGCTAAAATGGCCATAAAAAAATCCCTCTTTTCTACTTCGAAGTATAGCATAGCTTGTAAATTTTTCGTAAAAAT

# Questionable array : NO	 Score: 6.23
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAACTACTTATTATGAAATGTAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:82.76%AT]
# 	Reference repeat match prediction:         F [matched GTTTTAACTACTTATTATGAAATGTAAAT with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [0.00,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [0-3] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [55.0-66.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.91,0.27   Confidence: HIGH] 

# Array family : II-A [Matched known repeat from this family],   
//