Array 1 182236-178964 **** Predicted by CRISPRDetect 2.4 *** >NZ_UCSS02000047.1 Acinetobacter baumannii strain J8, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 182235 30 96.7 30 ............................A. TTAAGCCATTTTCTTTTGTGAATCCTAAAG 182175 30 96.7 30 .............................C ATCAAAGGCTTTGAGGGTAAGCGCCTTTGG 182115 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 182055 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 181995 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 181935 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 181875 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 181815 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 181755 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 181695 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 181635 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 181575 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 181515 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 181455 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 181395 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 181335 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 181275 30 96.7 30 ............................A. CTGCAAGACCACTGATAGTTGTTGAGAATC 181215 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 181155 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 181095 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 181035 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 180975 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 180915 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 180855 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 180795 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 180735 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 180675 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 180615 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 180555 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 180495 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 180435 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 180375 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 180315 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 180255 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 180195 30 96.7 30 .................T............ CTCATCGTGAAGGTTTTGCAAATATGCCTT 180135 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 180075 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 180015 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 179954 30 96.7 30 ............................A. AGCACGAGCAAGTTCTTGAGATGCCAAAAA 179894 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 179834 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 179774 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 179714 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 179654 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 179594 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 179534 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 179473 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 179413 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 179353 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 179293 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 179233 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 179173 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 179113 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 179053 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 178993 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 55 30 95.5 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : AAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAAC # Questionable array : NO Score: 5.33 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.29, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [20-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //