Array 1 2152463-2150709 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP017063.1 Lacticaseibacillus rhamnosus strain LR5 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 2152462 36 100.0 30 .................................... TTAAAGCAACCGGTAAGGTCCCAACTAAGC 2152396 36 100.0 30 .................................... ACAATTACCCCAGATTGACCCAAAACGTCT 2152330 36 100.0 30 .................................... TGTGTCGATGAGTTGGCTGCAGGCGATTGC 2152264 36 100.0 30 .................................... GTTTCAATTGATTTGGATATAAATTTGTTT 2152198 36 100.0 30 .................................... TTGAATAGTGTTATTCAGGGTATGCAAGAC 2152132 36 100.0 30 .................................... AACTGTTGATACTCTTGAATATAAAGGGGT 2152066 36 100.0 30 .................................... CTGATTCGCAAAATCCCGGGCGTGGGCTGA 2152000 36 100.0 30 .................................... TGGCTGGCAAATTGTTGGAGATGCTTTTGC 2151934 36 100.0 30 .................................... GGGTTATGGGGCGTTAAGCCCATTGATTTA 2151868 36 100.0 30 .................................... CAAAAATGTCAATGTGTCGATGACCTGGCT 2151802 36 100.0 30 .................................... TTTGGCTACAAGCATGACCCAACGGCAGGG 2151736 36 97.2 30 ........C........................... GTGTCCAACTTAATATCTGACCACTTAATA 2151670 36 100.0 30 .................................... TGTCTCCCACGGAAAAGTGGCACCTAAAAA 2151604 36 100.0 30 .................................... TCTTCTGCCATATCCTGACCCCCTTAAAGA 2151538 36 100.0 30 .................................... CACCGTGGGAACCGTGGTATCTTTCGACCT 2151472 36 100.0 30 .................................... CATAAAAGTGATTAGTGTCGATTGGCGTGC 2151406 36 100.0 30 .................................... ATGCTGGTGATGACACCGACAACCAGAAGG 2151340 36 100.0 30 .................................... GTCGTTTAAGTTGTTTCGTCGCTCTGAGTT 2151274 36 100.0 30 .................................... ACGATGAAGAAACAGAAGAACTTGACGGCG 2151208 36 100.0 30 .................................... CGATTATTGCGCCAATCACCACTGGGTTCA 2151142 36 100.0 30 .................................... GTCGTTTAAGTTGTTTCGTCGCTCTGAGTT 2151076 36 100.0 30 .................................... GCCAATTGAATAGGCCAGACAAAAATTGCC 2151010 36 100.0 30 .................................... TGTATTTTGTACCCCCGTGTTACTTGACGG 2150944 36 100.0 30 .................................... GACTTGGCGGATCTCGTTGTGCTTATTGCG 2150878 36 100.0 30 .................................... TGATGGTTTTGCCGTCCGGCTTGACAATCC 2150812 36 100.0 30 .................................... CTTAGAATAGCTTTATTGATTTGGTTATTT 2150746 36 83.3 0 ....T..................AA.C....G...A | T,C [2150712,2150718] ========== ====== ====== ====== ==================================== ============================== ================== 27 36 99.3 30 GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC # Left flank : GAGATGGATTTGGACAAGTTATTTCAACGCTTGATCATCAAGAAGGTAAGCCAATTGATAGAGGATCAGCGGCTGATTGAGTTGATTGAGCAGTCACAACGACTGGCAATGAGCTTATTGAGAGAGCCGTTGTTAAGTGAACTTCCAGTCACAGTCGAACCTGGTGGAAAACTTGAACAAATCATGAAATACTGTAATGTTCATTTTGATGAAGAAGTACTCACGGAGCCTTTCTCGAAAGTTGAAGCGGCAATTCAGACTTTGGCGAAACTTGAGGAGAAACGTCTTGTCATTTTTACCAACATCAGTCATTATTTAGATGTTGATAGTTTAAACAAGCTGTTAGATCAGGTTAAGGACACATCGTTAGAATTACTTCTCATTGAATTTTCAGATGTCGAACGTGGAAAGTTTTTTGAGAAATGCCAGTATATCTATATTGACAAAGATTTCATGGATAACCGTGAACTGATTGATTAAGAGACTGTGTGAAAACACCG # Right flank : CCTCACCCCATAAATGCTATGCAAATCCCAAAAGAAGGCAACAGCATTGTCAAAAGCAAAACTAATCCTTTCCCCAGCCTTTTACACTGATCTCAAAGAAATCCGTCACATGTACCAACAGGCGTTCAAATCACTTTACGGCAAATATCAAGATCGGGAAACCAATCCCTACTGTGAATCGTTGGAAAGCTTACAGAAAAAGTTCAAACGGCCTAACAATGCCTTCTTCTTTATAATCGTTAAAGATAAACACATAGGCCTGATTCGCGTTGTAACAGATCGCAAAAATTCGGCAGCCCGTATTTCACCATTTTTAATCTTGCCGTCTTATCAAGGAAAGGGATACGCTCAGCTCGGACTACAGTTGATTGAAGAACAGTTTCCGCTCATTCAAACATGGTATGTAGACACGATTGCGGAAGAACCCAAGTTGGTACATTTGTATCGCAAAGTCGGTTTTCAGCAGCTACCAGATCGGGAAACGACGATTAATGAGCATA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: R [matched GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //