Array 1 51190-51613 **** Predicted by CRISPRDetect 2.4 *** >NZ_QMBD01000008.1 Clostridium tetani strain B4 contig_0008, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 51190 30 100.0 35 .............................. ATGTTTTCTCTCCAATATGTTAAGCCTGCATAACT 51255 30 100.0 36 .............................. AACAATACCGCCTTTCTAATCCTAATTTTTGTTTTA 51321 30 100.0 36 .............................. ATCTATTAATTGTAGTTACAATTTTCTTTAATACCC 51387 30 100.0 35 .............................. GAAAAAGAAATAAATAGAATTAGAAAAGAGTGTAC 51452 30 100.0 35 .............................. TTGATTTGGTGAGTTTCTTCATTTGTAAGTGCTTT 51517 30 100.0 37 .............................. TTGTCTTTAGGTTTTCCATTCCCATATTGTTTTGCAA 51584 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 7 30 100.0 36 GTTGAACAATAACAAGAGTTGTATTTAAAT # Left flank : AAAGTTCAGAGGAAACAGTAATTAATGGTGAGAAAGTATATGTAGATGGTGATAATATTTTTAAATTACCAATTAGTGAAGAGGATTTTTGTAAATCTCTATACTTTAATAGTATAGTAGTAAGAATAGACGAAGATATGGAGATAATGGATTCAAGAATAATGATAGAAGCTTTTATAGATACAAATCCAGATTATTTTGCAGGTCATTCAATGGAAGTTACAATAACAGATAATTATAAAATATCAGTTGATGGATTGGCGGGTTAATATATAATATGTTATGTGTATGGGATATAAATATATTAAATTAAAAATTATAAACTTTCCCAGGTGATTTTAAATAGGAATATAGTTTAAGGTATTGATTTATAAGGGTTTATATGTTATTTTTGAGTTGGTTTTTCAAAAGTTAAATCGCTTGGGAAAGTTTTAGAGAAATGTTGAAGTATCAATGGTTTTATGGAATTCTTAATTTTAAGAAACCTTGATTTTACAGTG # Right flank : TCAACTAATGATAAAGTAGTAGTGTTTAACACTGACGATAGTGAAATTTCAGAAATTATAACGGCAGCTATCCATGACTCTAGTGGCATAGGTTTAGAAGATACGAGTTCTTTAAAATTTATGATTTTAGAAGGGGATTGGAATAATAAAGAAATTCCACAATGCTTTGAAGGAATTAAGTCCGCAGGTGAAAGTGGTAAAATACAAGTTTTAAGTAGAGGTAAAAATTTATTTAATAAAGATAGTATTTATTATTTAAACGTAGTTACAGGTAAGACTATAAGGAATCTAAGTAAATTTGGTAGTTCTTTTATTGTAGTTAAACCCAACACAAGTTATATGTAGTAGGATCAACGCATTAGAAGGAAATGTTGTAGATATTGAAAAAGAATTAAATGCTAAAGCTAATCAAGAAGATTTTCATAAATTGGTTAAATTAGATAAACATGCAGATAGTATAATTAAGTTTATTTCTGAGCTTAATTGTACAGAATCCTTAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACAATAACAAGAGTTGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.90,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [73.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 2 55136-56066 **** Predicted by CRISPRDetect 2.4 *** >NZ_QMBD01000008.1 Clostridium tetani strain B4 contig_0008, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 55136 30 100.0 32 .............................. TCTATTTTACCATTGATAGCTTGAACTCTCTC 55198 30 100.0 36 .............................. TTCCAATAAAGAAATCGAAATATATTTAACCCAAGT 55264 30 100.0 35 .............................. TTGTAATATTAAGTGTTTCTTGAAGCAGAAGTCTA 55329 30 100.0 34 .............................. ACAAATTATAAGGGAAGGTCTAAGCAGGATATAC 55393 30 100.0 35 .............................. AAAGAGGTGAGGTTAAATTGGGATAGTAAACAAAG 55458 30 100.0 34 .............................. TAAGGAACAAAAAATAAAACAATATGAAGAATAT 55522 30 100.0 37 .............................. AAAGAAATAAAAGCAAAAGAAGGAGAAATATACCAAA 55589 30 100.0 32 .............................. ATGGTTGGAATAACTATGGTTGCGAACATGGA 55651 30 100.0 34 .............................. GCATAAATTGTATCTCCTAATTGATTAGTCTGAT 55715 30 100.0 34 .............................. TAAACCATCCTCTATGCTCATGCGTATACATATA 55779 30 100.0 35 .............................. TCCCAATTTTCTCTATTTTTCCTGGACCTTAAGGT 55844 30 100.0 34 .............................. AAGTTTTGGTAGTAAAGGAAATAACTATGGATAT 55908 30 100.0 34 .............................. GTCCCTGTACCTAAAAATCTAAGTATTTCTAATA 55972 30 100.0 35 .............................. TTCTGTTTTCTATATTTTTATCTACTAAGGTTAAT 56037 30 96.7 0 .............................A | ========== ====== ====== ====== ============================== ===================================== ================== 15 30 99.8 34 GTTGAACAATAACAAGAGTTGTATTTAAAT # Left flank : TACTTGTTAAACAAGTTGAAACTTATCAAAGTAGAAGACTAGAAGTTGCAAAAAGTATAGTGGAGGCTATTGGAGGTAATATATACGAGCTGTTATATCATTATTATAAACATGATAAAAAATCATAGCAAAATAAACTTGAAAAAAGCCAATGATATAAAACAAATAATGCAAGTGGAAGGGGAAACTTGGCAAAGACTTTATGGCGAATTTAAAAATATACTTCCAGAGGAATTCGTTATGAATAATAAAGTTTATGATGAAGAAATATTAGGAAATCCATACAGTTGTACAGGGGAAGACTTGATATTATAAATAAAAGTTTTACCAGGTGGTTTTAAATAGGAATATGCTCTAATATATTGATTTATAAGGGTTTATATCCTATTTTGAAATGTAGTTTTTCAAAAGTTAAATCGCCTGGTAAATTTTTATGGAAATGTTGAAATATCAATGGTTTTATGATATTCTTAATTTTAAGAAACCTTGATTTTACAGTG # Right flank : ATATATATTAAAAAAACTTAGCCATGTCTTTTAAACCCATGATTATTCTGTCTTAATATCTTGTTCTATGGTAATATAATAGGGTAAGGAGAGTGAAAGTTATATGAAAAAAAGATTTAATGTAACTGGAACCTGTATACCAGAAAGACACTATATGGTAGATATATCTAATAAACTAGATAGTATATTAAAATTGGTAAATAATGAAGAATATTTTATTATAAATAGACCAAGACAGTATGGGAAAACCACTACTTTATATTTGTTAGAGAAAAGACTAAATCATATGAAAGAATACTTGCCTATAAAAATAAGTTTTGAAGCTATAGATACAGAAGGATATAGTAAAGTTGAAAAATTTTTAAGTAGTATAATGATGCAAATAGTGAACTATTTTAGATTTTCAACCAATAAAGAAATGTATAAATTTATAAAAAATCGTGAAAATCAAATTACTAATATGAATGATTTTAATAGTTTTATAACAGATTTAGTTGAGT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACAATAACAAGAGTTGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.90,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 3 58041-58464 **** Predicted by CRISPRDetect 2.4 *** >NZ_QMBD01000008.1 Clostridium tetani strain B4 contig_0008, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 58041 30 100.0 37 .............................. AGAAAAACACATATCATTTTAAAACATCCGCAAGGCA 58108 30 100.0 34 .............................. TAGAATTGTTGTAGTAATAATATTGAACTAATTT 58172 30 100.0 34 .............................. TTTACTATATTTTCACTTAGCATTTCAATATCAC 58236 30 100.0 36 .............................. ATGATGGCGAGAAATGTAAGATTGGAAGGGCAGTAA 58302 30 100.0 36 .............................. GCAATATCATTTAATTCAGATTTCCTAAATCTCTTA 58368 30 100.0 37 .............................. AGGATTATTGGCAATACTAGTTATAATAGGAGATATC 58435 29 86.7 0 ...A............T.-..........A | T [58449] ========== ====== ====== ====== ============================== ===================================== ================== 7 30 98.1 36 GTTGAACCTTAACATAGGATGTATTTAAAT # Left flank : AAATGTATATACTAGAACTTAAAATATGGAGAGGGGAAGAATATCACAAAAAAGGACTAAAACAGCTTGGAGAATACTTAAATCAGTACGGATTAGAAGAAGGTTATCTTTTAATATTTGATTTTAGAAAAGCTACAAATTTAATAGGTAAAACTGAAGAAACCCATGTAAATGCAGAAGATAATATTAAAAAGATAATAGAGGTTTATTGCTAAGATTAGTTATATAAAAAAGAAATAGAATAAAAAACTAAAAGCTCTCACATGATGGGAGCTTTTAGTTTTTTAACTTATAGTGTTATGTGATAAAATATAAATAAAAGTTTTCCCAGGTGACTTCAAATGGAAGTATAGCTTAGAGTGTTGATTTATAAGGGCTTACATACTATTTTTAAATGTAATTTTTCAAAAGTTAAATCGCCTGGTAAATTTTTATGGAAATGTTGAAATATCAATGGTTTTATGGTATTCTTAATTTTAAGAAACCTTGATTTTACAGTG # Right flank : AATAGTTTAAATTGTAATAGTATACTTAACCATAACATGAGATGTTTAATAAAATAATATTATGGAAAAGAGATTTATATTTTAGATCTAATTATTAAATTCAATAGTATAAATTGTAATATTCTTAGAAATAATATATGTATAATCACAATAAAATAAATATAAAAAATAATGTTAATGTACTATTATGGAAACAAAAGGATGGATAAAAATGAAGAAAAAATTAAAATTCTCTATTTCAGCAACTTATGAAGATTTAAAAGAAAAAGAAAGGATAGAAATTGATGATATCATTTATATAATTGAATTAGTTTCAGTTATTACATTAATTTTAAAAATCTTTCAATTCATAAATTAAAAGATATATTTTTTTTTAATCCTTTATACTATAGAAATATAATTAGTGTTATAATATGGAATAATATAAAATATTATGGTAAAATATATATTATAATGAAGATATAAGGAGGTGAAAAAGTGAAAATATATGAATTAACATT # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACCTTAACATAGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.00,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-83.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 4 67768-68386 **** Predicted by CRISPRDetect 2.4 *** >NZ_QMBD01000008.1 Clostridium tetani strain B4 contig_0008, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 67768 30 100.0 34 .............................. GCTTCATCTTTTAATTTGTTATGCAATTTTTTAG 67832 30 100.0 36 .............................. TGATGTTGGGGCTGTGTCTACTGCTAGAAATAATAG 67898 30 100.0 35 .............................. CCACGTACTGGATTTCAGTACATGGTTCCACGTAC 67963 30 100.0 34 .............................. ACTAATTTCTTAAACAAAAATAGAAGGGTTTTAA 68027 30 100.0 36 .............................. GTATACCCCGCTACTACACCGTTTAAATAACTGGTA 68093 30 100.0 36 .............................. TGCAATTCATCCGAATTGTTTCTAGTATCTATATCT 68159 30 100.0 36 .............................. GTGAATTTAATAAATTAACCAAGTAGTGGCATCCTT 68225 30 100.0 35 .............................. AATAATCTAATAGGTGGAGAACAATACGCAAGTGG 68290 30 100.0 37 .............................. CTTTCTTACCTTCCTTATTTTACTCTTTTTTCTACCC 68357 30 96.7 0 .............................A | ========== ====== ====== ====== ============================== ===================================== ================== 10 30 99.7 36 GTTGAACAATAACAAGAGTTGTATTTAAAT # Left flank : TTTAGTTTAAAGGAGAGAATGTAGATGAGTAAAAATTTTAATTATAATTATGCATTTGTTTTTTATGATGTTAATGAAAAAAGAGTAAATAGAGTGTTCAAAACCTGTAAAAAGTATTTGTCACATTTTCAAAAATCTGTATTTAGGGGAGAACTTACACCAGCAAATTTTATATTATTAAAAAAAGATTTAAATAAAGTAATAAATGAAGATGAAGATTTTATATGTATAATAAAACTTATGAATAATAAAGTTTATGATGAAGAAATATTAGGAAATCCACACAGTTGTACAGGGGAAGACTTGATATTATAAATAAAAGTTTTACCAGGTGATTTTAAATAGGAATATGCTGTAAGATATTGATTTATAAGGGGTTATATCCTATTTTGAAATGTAGTTTTTCAAAAGTTAAATCGCCTGGTAAATTTTTATGGAAATGTTGAAATATCAATGGTTTTATGGTATTCTTAATTTTAAGAAACCTTGATTTTACAGTG # Right flank : ATATACATTAAAAAAACTTAGCCATGTCTTTTAAACCCATGATTATTCTGTCTAAATATCTTATTCTATGCTAATATAATAGGGTGAGGAGAGTGAAAGTTATATGAAAAAAAGATTTAATGTAACTGGAACCTGTATACCAGAAAGACACTATATGGTAGATATATCTAATAAACTAGATAGTATATTAAAATTGGTAAATAATGAAGAATATTTTATTATAAATAGACCAAGGCAGTATGGAAAAACCACTACTTTATACATGCTTGAAAGATATTTAAATAAGTTTAAGGATTATTTAGTCATTTCTATAAGTTTTGAAGGGATTGGGGATTTAATTTTTCAAGATGAGAAGGTATTTTCAAAGGAATTTTTACAGATAATGTCTGATTCTCTTTTACTAAATAGCCAGGCATTGTCTGAGTGTTTAGAGGAACAAAAGCCACATGTAGAAAACTTTATTGACTTATCAAGAGTTATAACCAAGTTTATTGTGAAAG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACAATAACAAGAGTTGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.90,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 5 70508-71190 **** Predicted by CRISPRDetect 2.4 *** >NZ_QMBD01000008.1 Clostridium tetani strain B4 contig_0008, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 70508 30 100.0 35 .............................. AGTTATTATAACTGCTGCAAAAATAACAGGTGATT 70573 30 100.0 34 .............................. GGCTAAAATTTCTCTTAAAACCGCAGATGTAAAT 70637 30 100.0 35 .............................. TAGAACTTCAACTACGGATCAGCATTTAGATAGAG 70702 30 100.0 37 .............................. AAGTGTAAAGATGACCCTTCTTTTAAAAAGTCACTAC 70769 30 100.0 36 .............................. TATTACCACACCTTTAATTCGTCCATTTTTTTATTA 70835 30 100.0 34 .............................. GCCCTAGCTCCTGCCTTCCCCATACCCTCAACTT 70899 30 100.0 37 .............................. TAGCTCTCTTCAAACTTACCCAAATCTTCTAAAAGAA 70966 30 100.0 36 .............................. TATATTTTTATTCCTAATTCCTCTAGTGCAGATTTA 71032 30 100.0 34 .............................. TATGGAAACATTGATGTATTTCTATGTTCTCATA 71096 30 100.0 35 .............................. AGTTATAATCATATAGTTTTTTCGCTGGCACATAA 71161 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 11 30 100.0 35 GTTGAACCTTAACATAGGATGTATTTAAAT # Left flank : AAGTGGAAGAAACCCATATAAATGCAGAAGATAATATTAAAAAGATAATAGGGGTTTATTGCTAAGATTAGTTATATAAAAAAGAAATAGAATAATAAACAGAGTTCTTGGTTTTAGAGGGAGTTTTTACTCCCCATAAAGCTTAGAAATCGTTATCCAGGGACTTAGCTACTCTTTACTCCCGCTTTAAAGAAAATGGAAGTATTAGAGCTTATCGTCATCGGATAAACTAAAAGCTCTCACATGATGGGAGCTTTTAGTTTTTTAACTTATAAAAATAAGTATATACTTATAGTGTTATGAGATAAAATATAAATAAAAGTTTTCCCAGGTGACTTCAAATGAAAATATAGCTTAGAGTCTTGATTTATAAGGGGTTACATACTATTTTTAAATGTGATTTTTCAAAAGTTAAATCGCCTGGTAAATTTTTATGGAAATGTTGAAATATCAATGGTTTTATGGTATTCTTAATTTTAAGAAACCTTGATTTTACAGTG # Right flank : TTAAGTTCCTTTCTTTTTAGTGGAGTACATAGATAGTATGCAAATGCTCTTAATAGAAATGTAAGGAAAAATATGGTATAATGGCATTACCATAAATTTGTGGGAGTGATATTTTATGAATATCTTAACAAATTGTATTATTGGTTTTATTTTTATTGTAATTGGATTGGTATTAAGGGCATATCCACCGCAGCATATAAATAATAGTCTTGGATATAGAACACCATTTTCTATAAAAAATAAAGACACATGGTATGAGGGAAATCGTTTCTGCGGGACAATACTTTTAATAAGTAGTATTATTTTTATACCATTTTCAATATTAATAAAATATTTATATAGCAATAATTTAAATTTATCAATGGGAATATCGTCATTGAGCTTGTTGATTATTATAATTATAGGTATTGTATATACCGAAATACATTTAAGAATGATATTTGATAAGAATGGAACAAGAAAATGAGATAGTTAAAGGGAAGTCTAATGACTTCCCTTAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACCTTAACATAGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.00,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [75.0-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 6 75327-75680 **** Predicted by CRISPRDetect 2.4 *** >NZ_QMBD01000008.1 Clostridium tetani strain B4 contig_0008, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== =================================== ================== 75327 31 96.8 35 G.............................. CTAAGATACATCTTTAAACCATACATAGCATTTTT 75393 31 100.0 34 ............................... AAAGAGATAAAAACATTTTTAGGTTTTTAGAATC 75458 31 100.0 33 ............................... TCGACTAAAGGTTATATTTGGGGGTAAGATAAA 75522 31 100.0 33 ............................... AGAAAAAACAATTATAGAAATTGCTAAACAATC 75586 31 100.0 33 ............................... ATCTTATCTATGTAAATTAGAAAACAAAGGGTT 75650 30 87.1 0 A................-.A...T....... | T [75664] ========== ====== ====== ====== =============================== =================================== ================== 6 31 97.3 34 TGTTGAACAATAACAAGAGTTGTATTTAAAT # Left flank : GTATGTAGTGGATATAAACCCTTTTAGAAATGAAGTGGTTTTAGGAAATCTAGATGATCTTTTAAATACAGAACTTATAGCTAAAGATGTAAATTATATACCTTTTGATAATTTAAAAGAGCCAATGGAAGTTGAAGCTAAAATAAGATATTCTCAAATTCCTTCAAAAGCAGTAATAATACCTATGGAAGATGGTAGAGTAAAGGTGAACTTTAATGAAAAGCAAAGAGCTATAACTAAAGGGCAATCTGTAGTTTTTTATAAAGGTGATTTATTAGTAGGCGGAGGAATAATTGAATAAATTTTATATATAAAGTAATATTATTTACCAGGTGATTTTAATTGATTATATGCTTTAAAGTATTGATTTAACAGGGGTTGATTAATGTTTTAAATTAGTATTTTAAAAAAGCTAAATCATCTGGTAAATTTTAAAGGAAATGTTGAAATATCAATGGGTTTGTGGTATTCTTAATTTTAAGAAACCTTGATTTTACAGT # Right flank : TAAATCATTTTGAGAATATAAATTTATAATGTGACTATAAAATTTTAGCCCTAAAATAAAAGAAATGGTGAAATGTTTTGGTCATACCCTCAACTACATATATGGGAATAGTTTCTTCCTCTCCATTAACATATAATATTTGTCCTGATAGTGGGTAATTTTAAAATTTTTATGCATATTTATATAAAATAGAGTATTACTTTCTTAGGAAAAATAAGTTTTATAAAATAATTATATTTTATATTTATCGGTGTTTTATTATATGAGAGCCTTGCTAAATGTATTTTACAGCTATTTATAATAATTGGTATTTAGCCAATCCTAAATATAGGTCTTTGCTCTCATATGCCACACGTACACTTTATTTGAATTAACCTTTAATGAAGTTGCGATTTCATTAAAGGTTAAATTATTGTAATATCTTAATATAATAACCTGTTGATATTTCCAGTTTAATTGATTAATAGAACTTTTTACATGTGTAATTAGTTCTTCTTTTA # Questionable array : NO Score: 6.12 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TGTTGAACAATAACAAGAGTTGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:77.42%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.90,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [73.3-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA // Array 7 77750-78173 **** Predicted by CRISPRDetect 2.4 *** >NZ_QMBD01000008.1 Clostridium tetani strain B4 contig_0008, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 77750 30 100.0 36 .............................. ACTATACCAATGCCTAAAACCCATATCCTTGGAATA 77816 30 100.0 36 .............................. TCCCATATACCATTAATTTGACCTGTAGCAGTGTCA 77882 30 100.0 34 .............................. CAGATTATATTATGTTTATTGCCTAGCTGATCTT 77946 30 100.0 35 .............................. TAGTTAAAATGTGAGTATCTTATGTCCCCAATTAT 78011 30 100.0 36 .............................. TGCCTTCCTCTAAGTAACTAAACAATTCATTTATCT 78077 30 100.0 37 .............................. AAGATAATGAATACCAACCAGAAGAAGCAGCAAAAAC 78144 30 93.3 0 ............................TA | ========== ====== ====== ====== ============================== ===================================== ================== 7 30 99.0 36 GTTGAACAATAACAAGAGTTGTATTTAAAT # Left flank : ACTATTGGACTCTAAAAAAGACGATGAAATAACAATAATTAATAACTCTAAAATAGATGAGGGCAAATTCTATATTGGAGTTTTAAATTCTGAGAATGAGATTATTGCTTTTGATAAAGAAAAGCAAGACAAAATAACATTTGTAACTCCTGAAGAAGGATGCTATCTTGTTAGGATTTTAGCTAAAAACTCTAGTGGAAAATGTGATGTGAAAGTAGATTCTAAAAAAGGCATAGATTTTAATTACAATTCTATTAATGGGCATAATATGGGTTTACTAGAGAAAAATAATTGAATAAATCTTATATATAAAGTAATATTATTTACCAGGTGATTTTAATTGATTACATGCTTTAAAGCATTGATTTAACAGGGATTGATTAATGTTTAAAGGAAGCATTTTAAAAAAGCTAAATCGCCTGGTAAATTTTTAATGAAACCTTGAAATATCAATGGGTTTATGATATTCTTAATTTTAAGAAACCTTGATTTTACAGTGG # Right flank : AAACTAAGCGAAACTATTAAAAGACAGGAAGTAGAAAAATGTGATACTTAAATTTACTGCCAATTCTTAATTTCAAAAAAACTCCTTTATAATAATATTGTAATATTGAAATATTATTGGTATAATACACTCAAGTAAAGTTTATTATAAACTTACTTTGATTGTTATAATTGTGGGTTAATTTTATATTTAAGCTAAAGAATTACTAATTCATTCATATCTTAATACTTTTAAAATAGGAGAAGGTATATATGAAAGAATTTAGTATTAATACAGATGTTTATTTTGGAGAAGGCTCTTTAGATAGACTAAATGAAATTAAAAATAAAAGAGTACTAATTGTATGCGATAAGTTTATGGAAACTTCAGGTATGGTCACAAAAGTACAGGAAAAGCTTACTGACTGTGAAGTAACCATATACAGTGACATTGTTCCTGACCCATCTGTAGAAGTTATTGCATCTGGTATTCAAAAATTACAGAGTTGTAATGCACAGATT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACAATAACAAGAGTTGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.90,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 8 93968-94326 **** Predicted by CRISPRDetect 2.4 *** >NZ_QMBD01000008.1 Clostridium tetani strain B4 contig_0008, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 93968 30 100.0 34 .............................. AATGTAACTACTGTAGCATTCGCATCAAGTAAAA 94032 30 100.0 36 .............................. CTTGCCTGTGTAACTATTGGTAACAATACAACCCCT 94098 30 100.0 36 .............................. TGGGATTAGACATATTATTAAAGTCTTGTGGTATTT 94164 30 100.0 36 .............................. GATGAATAAGGCTAGAAGGAATTTTAAAATTTAAAA 94230 30 100.0 35 .............................. GTTTTTATTTTTTTTGTACCAATATACACAGTAAC 94295 30 93.3 0 ........................C.C... | AC [94319] ========== ====== ====== ====== ============================== ==================================== ================== 6 30 98.9 36 GTTGAACCTTAACATAGGATGTATTTAAAT # Left flank : GGCGGACTTGTAACTGTTATGGTTAGAGGAGATGTTGGAGCTGTTAAGGCTGCTACAGATGCTGGAGCTGCTGCTGCACAACGTGTTGGAGAATTAGTGTCAGTTCACGTTATACCACGTCCACATTCTGAAGTTGAAGTAATTCTTCCATCAGCTAAAGAAACTGCAAAATAATATTTTAATTATAGTGTAAAGTAAAAAACGTCGCTAAAATTTTTTAGTGACGTTTTTATTTTTGAAAATATAATGGTTAATGAAATAAGTATTTAAATATGCAGAGCCTTTTAAATTATATAGAATTATTGATATAATTAACATATGAATTTTACCAGCCGAAAAGAATTTTAGAATCTAGCTTAATCGTTGATATATAAGAGTTTAAGGTAGGTTTTTATATGATTTATAAAATTTTAAAATCACCTGGTAAATTTTCAATGAAACCTTGAAATATCAATATGTTTATGGTATTCTTAATTTTAAGAAACCTTGATTTTACAGTG # Right flank : TTCTTTCCAAATATCTTATTCTATCAGCGTCTTACCACCGGGCAGTTCAGTATAACAGTAAAAGGATATGATGGATTTATAGCAGAGTAATGTTAGAGGTAGTTTTTAGCTTAGGCTAGGAGCTACCTCTTTTTTATTGTTGTAAAATGTATAATAATATAATAAATATTTACATTTAGTCCTATATTGTACTATAATGTAAATAATATTATTAAGTATGGGGGGATTTAAATGAAAGCTTTGACTAAGATAGGTAAAATACTTGTAATATTAATAATTTTATCCGTCATAATTGCTATATCACCAAAGCTTGGGTCTATAGTATTTACAATAGTTCCAATAATATATTTAATCTATCTATTCAAGAAAGGACCTAAGTTTAAGAATTATAATTTTTTACTAAAGGGGTTAATTAGTTTCTTTTTAATATTAGTTTCAACCACAGGAATTGGAGGAGTTTTTTCTGAATTTGGAGAAGAAGATAATAAGTGGAAACAAGT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACCTTAACATAGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.00,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA //