Array 1 1931868-1929949 **** Predicted by CRISPRDetect 2.4 *** >NZ_AP021889.1 Thiosulfatimonas sediminis strain aks77 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1931867 28 100.0 33 ............................ TGCGTGTGCGACTATCTAGTGTCGCTACATACT 1931806 28 100.0 33 ............................ TCATAAGCAAAGCGGTATTGATCTGCTTTATAA 1931745 28 100.0 33 ............................ TCGGCTAGGTGACTCTTGCAAGCTTGAGATAAC 1931684 28 100.0 33 ............................ CAAGCGGCATTAGAGTATTTTGCTGCCATAGAC 1931623 28 100.0 33 ............................ TTACATCGGGTGGTGGAGGGAAATCTGCCTTGG 1931562 28 100.0 33 ............................ CCTTTGCTTCTTCGATTTGCTTTGATACTTTAA 1931501 28 100.0 33 ............................ TTTTGAAAGAGCATGGGTTTGAGGTACATAACA 1931440 28 100.0 33 ............................ TACGCCATTGACCATTTTGCCCTTGCGGGCCTC 1931379 28 100.0 33 ............................ TAGGAGTTCATAAATGCAGTGCGACATTACAAA 1931318 28 100.0 33 ............................ TGTGCAAGTGGCTACAGTTTCAGACCGTGAAAA 1931257 28 100.0 33 ............................ CAAAGATATTAGCCAAGCAATACAGGACAGTTT 1931196 28 100.0 33 ............................ TCAGTCCATTTTTGAGGGACGATACATTGATAT 1931135 28 100.0 33 ............................ TCAGACTCAACAATGATCGCCGGATAGGTGCCA 1931074 28 100.0 33 ............................ TCAGATTTGGGCTTTAGAGGATGCAGCAGAAGC 1931013 28 100.0 33 ............................ CTCCTTCTCGTGATCTTCAAGATCAGAGTAGTT 1930952 28 100.0 33 ............................ TAACCGTGATATTCACTTAGCGCGGCATAACCT 1930891 28 100.0 33 ............................ TCCAATTGCGCGCCATGCCTCTTGCCGGGTTTT 1930830 28 100.0 33 ............................ TGGTGGAGTACATGACCGCAACAGCAATTAGGC 1930769 28 100.0 33 ............................ CTCTTGGGTTCATCATCTCCAGCATTTCAAAAA 1930708 28 100.0 33 ............................ TGTGATTATCGCCCATCTCTTTTATTTTGATTG 1930647 28 100.0 33 ............................ TAATAATTCTATATATATATATAGTAGATTCAC 1930586 28 100.0 33 ............................ CAAATCAAGTTTCAAGCCGGATGACTTATCACA 1930525 28 100.0 33 ............................ TGATCGCCGGATAGGTGCCAGCTGGTAGTAGTT 1930464 28 100.0 33 ............................ TTTCTTTTTGGCGAATTTTGTTTTCAAACTCTG 1930403 28 100.0 33 ............................ TTTGAGGCGGCAATTCGACAATAGGCGGCTGGC 1930342 28 100.0 33 ............................ TAATTTGAAAATAAAATATTAGATGCACTGTAT 1930281 28 100.0 33 ............................ TATGGCCGTTTGCAGAATCGATTGATTGAAGTC 1930220 28 100.0 33 ............................ CATATCCATTTATACTCGTCACCGTCATCATCG 1930159 28 100.0 33 ............................ CGTTAGCGTGTCGGCTAAATCCAAACCAAGCGC 1930098 28 100.0 33 ............................ TATTACTTCTGACCCTGAGCAAACTAGCGTTTT 1930037 28 100.0 33 ............................ CCGATTCTGGGAGCTGGCCAAAATCTTAAAATG 1929976 28 89.3 0 ..............A......A.....T | ========== ====== ====== ====== ============================ ================================= ================== 32 28 99.7 33 GTCTTCCCCACGCCCGTGGGGGTGTTTC # Left flank : CTTTGTATTGATTTAGCTTTTTCGCTCACCTTGCAAATGGGTGGGCGCTATAACAAATATAAAGTCGCCAATGCTTTTAAAGACCGAGTGATTGAAATGGATCTGTTGCAAACCATTGCCAAAGATATTGAAGCTATTTTGGGAGAAAAACGTGCTCGTCGTCCTCGCAAATGATTTACCGCCTGCGGTTCGCGGGCGTATGAAACTCTGGTTTGTCGAACCCAAACCCAATGTGTTTGTTTCTGGAATAAAAGACTCGGTGGCCAAAAAAGTGGTGGACTACCTTTATGAACATTGCCCTGCGGAAAGCGGCTTGATGATATTTCGTCGTATCGCCGAAACCCCGGGTTATGAAATTCGAGGGCTTGGTGATCATAACCGTCAAATCATCGAAATATCCGGTCTGCAACTGGTCATTGAAAAACAGATCGAAACGCTTTAATCTGTAACCCAACACAGCAAATTGTGGTTTCAGTACCGTTCTTTAACAATTTGTTGAT # Right flank : CTCGAACGCGATAAGATCAACGCGGCACAAGCCGTCTTCCTCGCGCTGATGGAGGCTTAGTTTGTGTATTCGAATGGATGCCATTGGCATAGCCTTGCGCTGGTGGCAGTTGTTTGTTTTCCGTAGTCTTGTTTAATCTCGTTGTTGTTGTTGTTGTTGTTGTTTTTGTTTTCGTTTTTTCCATTTAAAGAAAAAATGCACGGCAAAGTGTGCAGCAATCAATACCACCACGGCGATCATGCCAATGGTGCCGATGTGTTCAATCCACATAATCTTCCTCGATTTTTATCGCTAAGTTTTTGATAGTCCGATAATTCTAGCGGCTTTTTGGTAGAATTTGCGCCAGTTTTTTGGCCAAAATTTCAGGAGTATTGTATGAATCCAAGTCAGCCTTTTAATTGGCGAACGTATAAAAATGACACTTTGTCTGGGATTACCGTGGCGTTGGCGTTGGTTCCTGAGGCGGTGGCGTTTGCGTTTGTCGCAGGTGTTCACCCTTT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACGCCCGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCTTCCCCACGCCCGTGGGGGTGTTTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.80,-11.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [41.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //