Array 1 8719-10191 **** Predicted by CRISPRDetect 2.4 *** >NZ_VZOQ01000003.1 Campylobacter sputorum biovar sputorum strain CCUG 9728 contig_0000003, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 8719 30 100.0 35 .............................. CTCAAATATGGTAAATAGTTTTGATAATCATTGGT 8784 30 100.0 34 .............................. ATATAACCAAAAAGGAATTTACAAAACTTGTAAA 8848 30 100.0 36 .............................. CTGGTGTTGGGATGGCAACTGGCTCAAAAACCGCTT 8914 30 100.0 36 .............................. AATTTGAAGTTGGAAAAAAAATACCCATTGAAGTAG 8980 30 100.0 34 .............................. TAATTTTCACAATGAGTATGTTGGCATAGATAAA 9044 30 100.0 35 .............................. AATACTACAGCTTCTTTGTATGATAGCTTTGCAAT 9109 30 100.0 36 .............................. TGAGCTACATAAAGAATACGATCTAGGGCTAGAAGA 9175 30 100.0 34 .............................. GAAATCTGTTGTCAGTCTATAAACGAGATTAAGG 9239 30 100.0 37 .............................. TGCGATTAAATAGTGCATAATGTCTTTTTGTGCTAAA 9306 30 100.0 38 .............................. CGATGATAGTTATATAGATGATGAAACTCCTAAATTTG 9374 30 100.0 35 .............................. GATTATTTAGCTGCTTTTCTAAATTACCACTAATT 9439 30 100.0 36 .............................. CTAAGTGTTCCAAACTCATGCTTAGTTCTCGATATC 9505 30 100.0 38 .............................. TCGATATGCAAGAAAATATAAAAACAGCTAGGCAAAAC 9573 30 100.0 36 .............................. TAGCCATACCATCTATTACATTTATGGTTCTTTTGG 9639 30 100.0 34 .............................. ACTTATCACTCATTTTCCCGCTATCTTTTCTTGA 9703 30 100.0 34 .............................. TTAGAAAAATAAGGAGGATAAAATGATAGAGATG 9767 30 100.0 35 .............................. CTAGCACTTCGCTTTCTAAACTCATAAGTGTTCCA 9832 30 100.0 37 .............................. CTTCCATAAAGCTAGATAATGCCGTGCTTTGCTCTTG 9899 30 100.0 35 .............................. TGGAGATGTATCCAAAAAAGCCCTATCCAACATGA 9964 30 100.0 37 .............................. AAGGAAGATGATTAACTAAAATTGAAAGAGTAGGTAT 10031 30 100.0 35 .............................. TAATATGTTCTTTTTCTTCTTGTGTGTATGGTAAA 10096 30 100.0 36 .............................. AAGCTTCATCACTTAAATAATCGTGAACTACAACGG 10162 29 86.7 0 ..........-.C............T...T | A [10180] ========== ====== ====== ====== ============================== ====================================== ================== 23 30 99.4 36 GTTAAAATTTGATCCTATGGATTTTGAAAC # Left flank : TTAGGGGATAATTTGATTTTTAATATGCTAAACAAGGATGAAATCACAGCAAAAGACTTTAAAACTGATGCTGGAAGGATAAGATTTACAAACGAAGCAGTGCAAAAAATAGAGTTAAATATGATAAAAACCCTTACTTCGCAGGTAAAATTTGAAAATCAGCTTCTAACTTACAGGCAGATAATTAGGCGTGAGGCAAATCAGATAAAAAAGTGTATTTGTGAGAATTATCCCTATGAAGGGTATGTTGATTAGTTTTATTGTGCGTAAGGGAAATTTTGTATTTTTTGAGGATTAGTTTTTAAAGCTAAATTTGGAATTATAAATTTTGGTTGGCATTTTGGTAGCGGTCAAACTTTTTTTAAAGCTAAATTTAAGTTTATACGAATGCCTATATTTAGCTATTTTGTTTTATAGACATAGCTTTTATAAGCGGCTTTTAAGCTGGATATATTTATAATAATCTGCAATGGCTGCCGATATATGATGATTTGGTTGCT # Right flank : TCCAGCAATCTTTGCGGTAATAGTATCAGACGACATTCAAAATGGGGATATATAATCAAAAATAGTAAAAATCCCATTTTAAATGCAAATTTAAAACATTTAAACACTTTTTAAGCCAATTAACATCTCTTATCAACCCTACAAATTTACCTATTATTTGACACTCACATTCATAATATCTAACAGGTGTATATAAAGGATTATAAGATACTAGCATAAGCTCATTTTCTTGTTTATAGCACTCTTTTATTACAAGTCCATCTGGTGTATTGATAGCATAAATGCTTCCATCTTTGTATATTATATCAATAGCTATAATGCATAAGTCGCTTTCCATGATATGAGGTTCCATACTATAACCCATACAAGAGATTATATCAACTTGATGTATAGTGCCACAATTACTAATTTTTTGAGTATTTTTTTATCTATTATTACTTCATCAAGCTCATTTTCATCATTATATTCTCCACTATCAAGACTAGCTTTTAAGCTAGACA # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAAAATTTGATCCTATGGATTTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.70,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //