Array 1 69232-68604 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB894594.1 Anaeromusa acidaminophila DSM 3853 C508DRAFT_scaffold00013.13, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 69231 30 100.0 35 .............................. AAAGTAGGGTGCGGGGGAATTGCCTTGCCTGGTAA 69166 30 100.0 37 .............................. GAAATATTGGAGGAAGAGCTGCAAGAACTCCTAGAAA 69099 30 100.0 38 .............................. AGGGTTTGAAACCAAAAAACTCGCTATACACGGCGGTG 69031 30 100.0 37 .............................. TTTAGAAACTGCAATGAAGCTAAACACATTTGCGTCC 68964 30 100.0 36 .............................. GAGCCATGGACAGCAGAAACCATAAAAAAAGCCTTT 68898 30 100.0 36 .............................. TATAATGCGGAAGTTTGGGGTGAAGCATTGGGTGAA 68832 30 100.0 36 .............................. TCAGTTTGAAGTTGGCGGTATGTACGAAGAGAAAAA 68766 30 100.0 37 .............................. TCGATTTCTTTCCATTCAGATAACACGATCCAGCACC 68699 30 100.0 36 .............................. CCGCAAGCAATGACGCCTGAAGCCATGACTTTGGCG 68633 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 10 30 100.0 37 GTTTGTAGACTACCTATAAGGGTTTGAAAC # Left flank : ATACGTATGAAGAGATATCATGCTGGATTGAACCGGCCTATGCAATAAGTATCCACAAGGCGCAAGGCTCTGAAGCCGACTATGTTTTCGTTGTGCCGGCTAGCGAAAAATCTCGTATAAACCAGAACATGATGTATACGGCCATCACCCGAGCACAAAAAAGGGTGTATCTAATAGGCGATGAGTCAATATGGACAACGGCGGCTGGAAAGATTCAAATGGCTCCGTATAGCAAGTTCGGTTTTTTAGTTAACCAAGCCCTTGAAGAAACAAAATGGAAAAATAGAAAAACCAAAGATGCATCAACAAATCGGTTTCAGGTGGTTATGGATTTTTAAGCCCAAATGGCAAAATGCTATTGTCGTCGATTTCCAATATGGTAAAAAGTACGGGGGATCGACGACAACGGCTACGAGCAAAAATCTGGCTTTATCGTTTCTGGTCGATGGTATAATTGATTAGGGCTGTTTTGATAGGCAGTAAAATAGCGAGTAAAATGG # Right flank : TCTTGAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTTGTAGACTACCTATAAGGGTTTGAAACTAGTATTTTTTAAAAAACAAATTCTCGGTTAAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTAGACTACCTATAAGGGTTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.60,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [8.3-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.64 Confidence: HIGH] # Array family : NA // Array 2 88832-87868 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB894594.1 Anaeromusa acidaminophila DSM 3853 C508DRAFT_scaffold00013.13, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 88831 30 100.0 35 .............................. TCAATCGAATGGAACCGATGCCAGCGGCTCTACAG 88766 30 100.0 37 .............................. TCGAATAACCGAAAAAACAATAAAATACAAGCCTTCA 88699 30 100.0 36 .............................. AGCAACCAAATCACGGCTAGCCCCCTGCCAGAAAAA 88633 30 100.0 37 .............................. CCCGGTCGACCCGGGCGGCCTGTTTTCCACTCAGTCC 88566 30 100.0 36 .............................. TCAGCAAATTGAGGGCCAAAGTTATTATGATCCAGC 88500 30 100.0 36 .............................. TGGCGGTGGCAGCGGTACGGCTGCTACAGGTGGAAC 88434 30 100.0 38 .............................. GCATTTGCTTCGCTTTGTTCAGCAATCGCGGTACTTCT 88366 30 100.0 40 .............................. GGTTCTAAATACCTGGACGCTGTGGACCGCCAGACGCTTC 88296 30 100.0 36 .............................. GGCCAATACGCATCTTTTAGCGACATCTACGATGTT 88230 30 96.7 38 ......................A....... CGTGTTGCGGCGGAAAACTACCTGCCATCAAATTCCAA 88162 30 76.7 36 ..A.G..A.........G....G.G....T ATGTACACATAAGTTGCCTCGCCAATACCAGAAGTT 88096 30 86.7 35 ..........C......G....G......T GTGCGAGTTGAATCAAAACGCCGCGTGAATGGCAT 88031 30 83.3 37 ..A.G....TC.................G. AGGAACGTTCAATGGCCAATATTGCATGTGAAGAGTG 87964 30 80.0 37 .G..GT..T.............A..A.... CATGATGAAAATCGGCAGACAAAAATCTAGAAGTCGG 87897 30 83.3 0 ..A......A............A.GA.... | ========== ====== ====== ====== ============================== ======================================== ================== 15 30 93.8 37 GTTTAAAGACTACCTATAAGGGTTTGAAAC # Left flank : AGACATTGCATTGCAAATCAGTGAAATCAATGTCCGGGGAGGCTATGATTGTATTGTTATTGTCCGCGGTGGTGGAAGTCCCAATGATTTATTCGAATATAACCACCCAACTTTGCTGTTGGCGATTGCAAAGTCGAAAATCCCAGTCATCACCGGAATCGGCCATGAAGGCGATTATCTGTTGTGTGAAGAAGTAGCAGACGTGCGATGCTCCACGCCAACCGCGGCTGCAGAGTTGCTGAATAAAATGGCTTCAGAAAGAGAACGACAAAAACAGGTAAATCAGTACAAACGATGGGTATTTATTCTTGCAGTAATTCTCTTTGTGATCTTAATTTTAAAAATTGTTGGCAAATAAATGTCGTCGATTTGGAGTAGCGTAATTGCTCCTGGGGATCAACGACAAATGACACGAGAGAAAATATGGCTTTATCGTTTCTGGATAATGGTATAATTGATTAGGGCTGTTTTGATAGGCAGTAAAAAAGCGGATAAAATGG # Right flank : TATCGCAGATGAACCAACTGAAAAGCATAACCTGATCCTCCTCGTAACACAAACGAGGAGGATTTTATTTATACGTATAAAATTTTAAAAAACACACGTATAAAACATAGTAATATACAAGCATAGATGTTATAATATAGATACCGAATAATGTAAATCGTGCGGAGGGGTGCCGAATGAAGCTATTTGAAAACGGTCCAGACAATGCAGCTGCAGAGCTGGATATAAAAAAACTAGAACGAACCAATGACCGGATTTTATACCAACGCAGCACGTATCTGCGCTATACCGAAGGACAAAAAAGAGCGTTAAAGGCAATTGCAATGTTTTTGCAATCGGCGCTGCATTTTCAGTTTACCTTGGCCGGTTATGCGGGAACGGGCAAAACAACCATTGTCGAAAACATAGTCAATTTTGCTCTTAGCAAAGGGAAAACTGTCTATGTAGTGGCACCTACCAACCAGGCGGTAAAAGTATTAAAAGAAAAGATGCCCGAGGAA # Questionable array : NO Score: 5.95 # Score Detail : 1:0, 2:3, 3:0, 4:0.69, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAAAGACTACCTATAAGGGTTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.60,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [27-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA // Array 1 426-60 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB894611.1 Anaeromusa acidaminophila DSM 3853 C508DRAFT_scaffold00030.30, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 425 36 100.0 30 .................................... CGACTCAAGTGCGGTACAAAATTTCTCAAG 359 36 100.0 30 .................................... AGTAACACTAAGGCAAGTATTGTAAAAATG 293 36 100.0 30 .................................... TCCACCCCACGGCTTCGGCAGCTGGCCAAG 227 36 100.0 30 .................................... ATGTCGTAGCCCATTTTGTCTGTGACGGCT 161 36 100.0 30 .................................... CAATGACGCCTGAAGCAATGACTTTAGCCA 95 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 6 36 100.0 30 GAAAGAGCATGTAGGAGTGTGTACGGAAGGTATGGC # Left flank : TTATTCAATACAAAATGCTATAAGAGAAACCGTTAAATCATTAGGTACTTGTTTTATTGAAAACGATCCTTTTAAAATTACTCTACCCGTTTTATAAATACCTAATGATCAAAGCGCCAGTAGGAAGGTATATGAGACTGTTATTGTTTTTTGATTTACCTACAAAGACTCCTATTAACAAATACCATTACCGGCAATTTCGTGAATTTCTTCTTAGAGATGGTTACGTGATGCTGCAGTTTTCTGTATATAGCCGCATAATTAAAGGTGAAGAAAGTATTGATAAACATGAAAAACGGTTGATCGTGTCTCTTCCACCGGAGGGATCTATTCGATTATTATCGGTAACCGAAAGCCAATACTGTAAAATGAAAATTTTGCTTGGGAAACCCTCTTATCAAGAAAATCATGTAAATGCTTCACAAATTCTTCTTTTTTGACGTTTTTTTCATAAGAAAAACCCTAGAAACCTATATGGTTCCTAGGGTTTTTCTTTCAGG # Right flank : CACCCCCTGGTTAATGGCCTGTTTGATGGCTGAAAGAGCATGTAGGAGTGTGTACGGAAG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAAAGAGCATGTAGGAGTGTGTACGGAAGGTATGGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [48.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.01 Confidence: HIGH] # Array family : NA //