Array 1 674735-668360 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP038013.1 Spiroplasma gladiatoris strain TG-1 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 674734 36 100.0 30 .................................... ATGAAATGGAATGAGCAGTTGAATTAACAT 674668 36 100.0 30 .................................... AAACAAAGAAAATATTACAATACATTGACC 674602 36 100.0 30 .................................... TAGATTTAACAGAAGATTATGAAACAATGT 674536 36 100.0 30 .................................... GTTATAACTAATTTGTAAGTACATTCGCTA 674470 36 100.0 30 .................................... TAAAACATTAATGATTGATAGTACAATGGT 674404 36 100.0 30 .................................... AAAAATATCAAAATCTGGAAATTGTTGATT 674338 36 100.0 30 .................................... AATCAAGTCTTTTTATTTGTATGGTGGAGT 674272 36 100.0 30 .................................... CCATACCTTGATTGTTACCTTTTCATTGTT 674206 36 100.0 30 .................................... TGGGAGTTTTAGCAAAACAATATATTACAA 674140 36 100.0 30 .................................... ATAAGTTTAAAACTCACTCATCCCTTGTTT 674074 36 100.0 30 .................................... GAGATAGTCTATCAAGTTACTTTACAATCT 674008 36 100.0 30 .................................... TTTTAGTAGCAATTAGAAATGATATAAATC 673942 36 97.2 30 ...............................T.... TTGTTTATTCATTAAACAAAAAATACAATC 673876 36 100.0 30 .................................... TCGTTATTATTTTTAGCAACCATATATCAA 673810 36 100.0 30 .................................... TTTTTCAAAAATTTTGGCTTTGCTCGTTGG 673744 36 100.0 30 .................................... TGTTAATGCTTCTATTAATTGCTCTTTTGT 673678 36 100.0 30 .................................... TATGTAGCAATTGTATAGAAAATTGCTACA 673612 36 100.0 30 .................................... ATTGCAAATTGTAAAATATAATGGGAGATA 673546 36 100.0 30 .................................... TTTTTGGGATTGCATAACCTTCGCCAGGAC 673480 36 100.0 30 .................................... CATTTGTCCACCATCTTGACGTAGCTCGTT 673414 36 100.0 30 .................................... AAAAATTAAATGTAAAAAAATATCAAAATA 673348 36 100.0 30 .................................... AATATATCTAATATATTTTGTAATTGTTCT 673282 36 100.0 30 .................................... TTTTATTAAAGCAAACCAACTACAAATTGA 673216 36 100.0 30 .................................... CAAATTCAAAGTCATCTTCATCTTTTTTAA 673150 36 100.0 30 .................................... AAAAGCTATTCCTTGATATTATGGCCTTCC 673084 36 100.0 30 .................................... CTAATACACGATTGGTTTTAATATCAACTA 673018 36 100.0 30 .................................... ATTTTCTTTGCATGTGTTTACTATTTCTAA 672952 36 100.0 30 .................................... GATAAAGAGATGCTTATGAAAACATTTTAT 672886 36 100.0 30 .................................... TCAATCACTACAAATTAGGTTGATGAGATA 672820 36 100.0 30 .................................... ACTGCATTGTAATAGATGAAGACAGTGATG 672754 36 100.0 30 .................................... TTTTTTAAAATTATCTAATTCATTATAAAA 672688 36 100.0 30 .................................... GTAAGGAACATTAACTAATTAATGTCCTTG 672622 36 100.0 30 .................................... TTTTCTCCTATCAATTAATATCATCTCATA 672556 36 100.0 30 .................................... ATAAAAATAGTGTATTACATATGTTTTTAT 672490 36 100.0 30 .................................... TTTTAACTGAGTTATTAGATGTTGTTATGT 672424 36 100.0 30 .................................... GATATTTGCTTTATGATTTATACAAAACCA 672358 36 100.0 30 .................................... TTTTAGCAGCAATTTCACCACCAACTAGTG 672292 36 100.0 30 .................................... TGATATAAAAAGAAATATACATATTTATAC 672226 36 100.0 30 .................................... AGAACTAAAAGAAACTTTTATTGATAGTAT 672160 36 100.0 30 .................................... TTGTGAAAATACTAATCGATCATCAGATAA 672094 36 100.0 30 .................................... TTGAGTTTATTTTTATATTGACCCAAAAAC 672028 36 100.0 30 .................................... AAAAAAATTAAAAGTATGAGTTGTTATTCA 671962 36 100.0 30 .................................... CTTGTAATTTAAAAAGTTTTGCAACTAGAT 671896 36 100.0 30 .................................... TTATCTTTTTGCCAAAACATATGTTGTTTG 671830 36 100.0 30 .................................... ATGCTCAATCTGTTATTAAGACTTTAACTA 671764 36 100.0 30 .................................... TAAACCTAATCAAGGTAAAATTCTTCACTT 671698 36 100.0 30 .................................... TACAAGAAACTATGCCTAAATACTACTTAT 671632 36 100.0 30 .................................... ATTGCAAATTATAAAATATAATGGGAGATA 671566 36 100.0 30 .................................... ATTATACACAATGACAATCAACAAAGTCAT 671500 36 100.0 30 .................................... AAACAAGTGGGTTTCCACCAAGACTTACAA 671434 36 100.0 30 .................................... TATTAAGCAAAAAAAATTTAGGGTATTGTT 671368 36 100.0 30 .................................... GCTATCTAATCCAACATATTTAAATTTGCC 671302 36 100.0 30 .................................... AAGACAAATTTGTTTTCAAATGAGTTTATT 671236 36 100.0 30 .................................... CGATTGACTTTGCAACCATTTGATTTCTTA 671170 36 100.0 30 .................................... GTTAGATACCTTAAACATTAGTAAGCCTTT 671104 36 100.0 31 .................................... AAAAGAGAGTAAAAAGGTTAAACATTAATGA 671037 36 100.0 30 .................................... AAGTTTTATGTAAAACAACATAATTGTAGT 670971 36 100.0 30 .................................... GGTTCATAGGAAGAAAAATTATATTTGATA 670905 36 100.0 30 .................................... CGAAGGAATTGATTACAATATTTCTAGTGA 670839 36 100.0 30 .................................... TATCTTTACTTCATTGTCCAACTCGTTTGC 670773 36 100.0 30 .................................... TATATATATGTAAGGCAAGTACTTTACAGA 670707 36 100.0 30 .................................... AAAATCTTTTAATTTATCTGCTAAATCAAC 670641 36 100.0 30 .................................... AATATACCTTATATTAAAACTCAAGGTGTT 670575 36 100.0 30 .................................... TAAAAATGTTTAAAATTAGATATAAATTAA 670509 36 100.0 30 .................................... ACGAAGATAGTTGAGAAGAAGCGAATGAGG 670443 36 100.0 30 .................................... TAAAAAATGTTGTTTTTAATATAAGTTATA 670377 36 100.0 30 .................................... TTCTCCGTCAATTCTTAAAATTGCTCCTTC 670311 36 100.0 30 .................................... TACAAATGGGTTAATCTTAAAGTTTGTGTA 670245 36 100.0 30 .................................... ATTGAAAAGAATTTGAAGAACAAAAGGCTA 670179 36 100.0 30 .................................... AAAAAATCAATATAAGTTTCACCACTTATT 670113 36 100.0 30 .................................... TATTAATATCAATAGAAAATAAAGAAACAG 670047 36 100.0 31 .................................... ATTAAAAAAATGAATGTTCACTCTTTTAATA 669980 36 100.0 30 .................................... AAGTATATACATTTAATTTAATCACAACAG 669914 36 100.0 30 .................................... AACAATTGACATTAACGATATTCCAAGTGC 669848 36 100.0 30 .................................... TTGTAAATCTTTTTCTAAATCTATCTTCAT 669782 36 100.0 30 .................................... AAAAAATCAATATAAGTTTCACCACTTATT 669716 36 100.0 30 .................................... TATTAATAAAAATTTTAATTGAAAACAAGA 669650 36 100.0 30 .................................... ATAAAAATATTGTCACTCACTCCTTGCAGA 669584 36 100.0 30 .................................... TTTGACTAGATCGAAAATTTGAAAAAGGTT 669518 36 100.0 30 .................................... TTTAGATGAAAGGCATTTAACAAAGAAATT 669452 36 100.0 30 .................................... CACAATGAGACAACAATGAAATGCAAACTA 669386 36 100.0 30 .................................... ATCAACAGAATTGGTTTTAAACATATCCAT 669320 36 100.0 30 .................................... TATATAAATGTAAGGCAAGTAACTTACAGA 669254 36 100.0 30 .................................... AAACACTCATAACTTTTCATTGTGACCCAT 669188 36 100.0 30 .................................... TCAAAAAACTAGAAAGAACTAAGAAGGATG 669122 36 100.0 30 .................................... ATTCTATACATAAATCACAATCTTTCATTA 669056 36 100.0 30 .................................... AACAAATATCAAACTAGCAATATATTCGTT 668990 36 100.0 30 .................................... CATTTGTCCACCATCTTGACGTAGCTCATT 668924 36 100.0 30 .................................... TAATGACTATATAAAAATGCAAGTTTACAA 668858 36 100.0 30 .................................... TAATAGCATCTTGTTTGTCTAATTCTTCTA 668792 36 100.0 30 .................................... AAAATCAAAAAGAAGAATTTATTAAAAGTG 668726 36 100.0 30 .................................... TAATAAAGCTTTAAACATATATTTCTCCTT 668660 36 97.2 30 .............A...................... TTAATGGTTGACAAATGGAACAAATCCGTA 668594 36 94.4 31 ........TT.......................... AATAGATCTGTTAATCAGAAACAAGGGAAGA 668527 36 100.0 30 .................................... AACTTGGCATATTTTCTAAAAGAGGTGGTA 668461 36 100.0 30 .................................... GTAAGTGTTCTTGTTGCATAACTTCCATCT 668395 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 97 36 99.9 30 GTTATGGTACCCTGTAAAATTATGTAGTAGTAGAAC # Left flank : GTGATCAAACAATTTTAAAGTTACAAAATAATGATGATAATGAAACCAACACTTATTTAAATCAAGCTAAGTTAAGAATAATATATATTGAAATATTAAAAAATTTATTAATAATTGATGATAAAAATTTACATTTTTTATTTGTAAATCCATTTTTTGGGCTAAATTATACAGAAATAAAAGAGTTTTTTGATGAAATAAAAGAATTAAAAAAATTTACAATTGTTAGTGACAAGTTTATTTATGAAGATGATTTAAATCTAGAAAATTTAAAAATATGAATAGATAATAAGTTTCTAGATTTATCAGTTATTATTGATAATTTAAAGTTTTATATGAATTTTTCAAATTGTACTTTAGAAAATGACTTTTATAATGAGCTACTTTTAAATACTAAAAACTTAATAAGTAGTTATAATAGTAAAAATTTAGAAATAAATTATCCTGTTTTCCATTACCTTTTAAACTTATAATTATTTTTTAAAAACACTTGATTTGAG # Right flank : AAAGTTTCAATAAAAAATAAACAGCAAAATATACTTAAAATATTTTCAAATATAAGTTATTTTATTTATATGTTAATATTTTTATATAGTAATAGGAGTAATAGATGAAACTAAATGAAATTATCAAACAATCTTTAAACGATGAATTAAATCGTCAACAAAACCACATTGAATTAATTGCTAGTGAAAATTATGTATCTGAAGCAGTATTAATTGCAAATGGATCAATTTTTACAAATAAATACGCAGAAGGTTATCCTAACAGAAGATATTATGGAGGATGTAAATTTGTAGATCAAGTTGAAACTTTAGGAATTGAAACTGCAAAAAAACTATTTGAAGCAGAACATGTCAATATTCAACCTCATTCTGGTAGTCAAGCAAATGCAGCAGCTTATAAAGCATTTTTAAAACCTAATGATAAAGTTTTAGCAATGGATTTAAAAGCTGGAGGACATTTAACTCATGGATTTGAACTAAATTTTTCAGGAGAAATATAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTATGGTACCCTGTAAAATTATGTAGTAGTAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: R [matched GTTATGGTACCCTGTAAAATTATGTAGTAGTAGAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [86.7-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //