Array 1 150-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_WWHX01000863.1 Streptomyces sp. SID5910 SID5910.c961, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 149 29 100.0 30 ............................. CGCCGACTTCAGTGGCAGAGCGGGGTGTAG 90 29 100.0 32 ............................. CAGATGGCCGAGTTCTCCAAGTACGGCTTCAA 29 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 3 29 100.0 32 CTGCTCCCCGCACCCGCGGGGATGGCCCC # Left flank : CCAGGTCGCCTCCGGCATCAACCACGACGGTCCCGAGGACTACGGAGACGATCTCTGGTGACGGTCATCGTCCTCACCAACTGCCCGGCCGGGCTACGCGGCTTCCTCACCCGCTGGCTGCTGGAGATCTCCGCCGGGGTATTCGTGGGCAACCCCTCGGCCCGGATACGCGACGCTCTGTGGGAAGAAGTCCAGCAGTACGCGGGACAGGGCCGCGCCCTGTTGGCCCACACCACGAACAACGAGCAGGGCTTCACCTTCCGCACCCACGACCACGCCTGGCACCCGATCGACCACGAGGGCATCACCCTCATCCACCGCCCCGCCCCCAACGCGTCGCCTCCCCAAGCCGGACCACCATCCGGCTGGAGCAGAGCCTCCAAACGCCGCCGCTTCGGCAGGGGCTGATGCGCACGGAGCCAGCTATGCCCCATTTGCCGAAATCGGCGGAAGTCCCAGGAATCCACCTCCGACACCAACAAAACCACAGTTCGCCCAGC # Right flank : C # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGGCCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCACCCGCGGGGATGGCCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 9847-10181 **** Predicted by CRISPRDetect 2.4 *** >NZ_WWHX01000863.1 Streptomyces sp. SID5910 SID5910.c961, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 9847 29 100.0 33 ............................. GATCAGGAACGCAACCCCACCGCCGCCTTGTCG 9909 29 100.0 32 ............................. CGGGCGAGGTAGCCGCGGAGTCCGGCGCCGAA 9970 29 100.0 32 ............................. GAGGCCGGCCGCAACAGCCGCGAGATGGCCAC 10031 29 100.0 32 ............................. CGTGGCCGCCGCCGCTGAACCGGAGCTCCGGG 10092 29 100.0 32 ............................. AGGTACAGGGTGACGTTGTCGACGGTGCGTCG 10153 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 6 29 100.0 32 CTGCTCCCCGCACCCGCGGGGATGGTCCC # Left flank : CCTGACACGCGAACGCCGGGGTGGCCTTGCCGATGTCGTGCGCGCCGGCGAGCCACACGGCAAGGGCACGCGCGTCCGACTCCCCCCGGGGCAACGGCTCGGCGATCAGTCGCCGCACCCCTACAGGCAGCCACTGGTCCCACAACAGGCCCGCCACGGCGGCGCTGTCCTCCATGTGCCGCCACAGTGGGAGCCACCCATCGGTCTTACGGTCATGTTTGGCCCACACCGCCCTGGCCGGCTTCCCAAGCCGACACTTCAGGCTGGAACGGACGTTCCCCCCATCACCCATGAGTGATTAATACAGGGGGCAACTGGCTCGCCACATCAAAACCAGCAAAGAGAAGAGTTCGCCGAATGGCGGCACTCCCAGGACGTAAGCTGACCGGCTGACCCGAGCGCGACTGCAAAGCTAGGCACCACCCCGTGTCCATTTGCCGGATTTTGCAAAAGTCCCTCAGAACGTGTCCCCGCGACCGTAAACTCGCAGGTCAATCAGC # Right flank : | # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [46.7-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 1-456 **** Predicted by CRISPRDetect 2.4 *** >NZ_WWHX01000183.1 Streptomyces sp. SID5910 SID5910.c194, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1 28 93.1 32 -.......................G.... CGGCGCGAGCGGGTACTGAAGGCGATCGCCCA 61 29 89.7 32 ..........T...T.........G.... TGCCGGTCGTCCATGCCGTTCTCGGCCCAGTC 122 29 100.0 32 ............................. TTGGCTTGGTGGAAGGTCCGGTTGTCGAGGTT 183 29 93.1 32 ..............T.........G.... TGCGCATACCTGGAGTCGAGTTCGCTAAGCGC 244 29 96.6 32 .G........................... GTCAGCCGCATCTTCACGACGTCGCCGTCAGC 305 29 93.1 32 .....T.............A......... GCCGTCCTTCAGAGTCCGGTTCGCGAAGTTGG 366 29 93.1 32 .................C......G.... ACGGTGCATAGCGGCGGCATCGTGCCCGGGTG 427 28 89.7 0 ...T.............A......-.... | CA [442] ========== ====== ====== ====== ============================= ================================ ================== 8 29 93.6 32 CTGCTCCCCGCACCCGCGGGGATGCTCCC # Left flank : | # Right flank : CCGCCCTTGGAGCGCAAGCGCGAGACCCGCACCCGGAACACGACCTCAGACCCCCTCACCCCACCCCCAACCCCACCCGCACCC # Questionable array : NO Score: 3.73 # Score Detail : 1:0, 2:3, 3:0, 4:0.68, 5:-1.5, 6:0.25, 7:0.01, 8:1, 9:0.29, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGCTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCACCCGCGGGGATGTTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [5-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 2-213 **** Predicted by CRISPRDetect 2.4 *** >NZ_WWHX01000924.1 Streptomyces sp. SID5910 SID5910.c1029, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 2 29 100.0 32 ............................. TCCGGACCGTCAAGGTCGTCACGGCTCAGGGT 63 29 96.6 32 ............................T CCGGTCGTGAGCGCACCAGTGGGCCTTGACCG 124 29 96.6 32 ......T...................... GAGCATCGACGCGACGGAGAACAGCTTGTCCA 185 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 4 29 98.3 32 CTGCTCCCCGCACCCGCGGGGATGGTCCC # Left flank : GC # Right flank : C # Questionable array : NO Score: 5.77 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 1-211 **** Predicted by CRISPRDetect 2.4 *** >NZ_WWHX01000440.1 Streptomyces sp. SID5910 SID5910.c485, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1 29 100.0 32 ............................. GACACCAAGGTCGAGTACGAGGACGACGGCGA 62 29 96.6 32 ............G................ GCGACGCCGACCCTGGCCGACATCCGGTCCGC 123 29 100.0 31 ............................. GAACCGAGCGGCCCAAGAACCTCCAGATCCG 183 29 96.6 0 .........................C... | ========== ====== ====== ====== ============================= ================================ ================== 4 29 98.3 32 CTGCTCCCCGCACCCGCGGGGATGGTCCC # Left flank : | # Right flank : CGATACGGCGGGTGTTGGGTGCGACGGGGTCATCTGCTCGCCCGCGTGAGTGGTGGCGCCTGCACCGTGCGCCCACCCCCGGGACCACCGCCCCAGCCGTCACCCCAGCCTCCGTCGGTCGGTCAGTGTCAGCGTCGTAGCCGTCGCCAGCAAGACCGCACCCACCGTCGGGAACAGCAGGCGTAGGTCGGTCAGTTCCACCAGGGCTGCACCCGCCGCCAGTCCGAGGACGTTCGGTGTGAAGATCAGGGTGTTGGCGGTGGCGCTCGCCCGGCCCAGGAGGGGCCCCGGTGTCTCGCGCTGCACCGTCGTCAGGGCGGCGATCAGGGTCGCCGGCATTCCCGCGCCCGCCGCCGCGAAGGACGCCAGGGTCACCGCGTCGTGCGGTACCGCCCGTGCCGTCACCGACACCGCCAGCAGCGCGAGCCCCGTCGCCGCGAACCGGCGCTCGCCCAGGCGGCGCAGCGCGGGTCCCGCCAGCAGGCCGACCGTCACTGAGC # Questionable array : NO Score: 5.77 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 3-214 **** Predicted by CRISPRDetect 2.4 *** >NZ_WWHX01000549.1 Streptomyces sp. SID5910 SID5910.c602, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 3 29 100.0 32 ............................. GGCCACGTAGATGGCCGCGCTGCGGATCAGCA 64 29 100.0 32 ............................. CCGCCGACAAGCCCACCGCAGCCCCGATGGAC 125 29 100.0 32 ............................. TGTGCGGCCATCAGGGGGTCTCATCCTCCGCG 186 29 96.6 0 .........................T... | ========== ====== ====== ====== ============================= ================================ ================== 4 29 99.2 32 CTGCTCCCCGCACCCGCGGGGATGGCCCC # Left flank : AGC # Right flank : | # Questionable array : NO Score: 5.82 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGGCCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCACCCGCGGGGATGGCCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [1.7-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //