Array 1 813035-811415 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP044090.1 Streptococcus agalactiae strain FDAARGOS_670 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 813034 36 100.0 30 .................................... ATCATAACCGTTATAATATTCGTACGAGTT 812968 36 100.0 30 .................................... CGTTTCGTCTTTTGTTAAGTCAAGCTCAAT 812902 36 100.0 30 .................................... ACATATTCAGGTCTTTATAATCAGTTTGCG 812836 36 100.0 30 .................................... ATTAAATCTTCTTTTGAAGTTACTGTACGT 812770 36 100.0 30 .................................... TCCTAAAATTGCAACTAAACTTTATGGAAA 812704 36 100.0 30 .................................... TAATTGCCAATGCTTACAATATCTTCGTCA 812638 36 100.0 30 .................................... ATGTTCTGAATTACCTTTCTCGACACTCCG 812572 36 100.0 30 .................................... ACCATCAAGGCTCTTATCTGCAGATTGTTA 812506 36 100.0 30 .................................... AAATGGTTGCCAATGACTTTCTAGAGTGAT 812440 36 100.0 30 .................................... ACAAAATCTTTTGTTGCTCCTGGACGTATT 812374 36 100.0 30 .................................... ATGTAAGGTATTGTAAAACTTCTTCTTGCG 812308 36 100.0 30 .................................... ACTGTTCCTATAATTAAAATAAAAGAGGTA 812242 36 100.0 30 .................................... TGTTCCAGTAAAAAGTAATTTTAAAGCATT 812176 36 100.0 30 .................................... TTTAACCTTTGAAAATGTGAAAGGCTCGTA 812110 36 100.0 30 .................................... GCGATGATGGTAAGTCATCATGGACAGCGT 812044 36 100.0 30 .................................... TTTTACACACGATGTCAGATATAATGTCAA 811978 36 100.0 30 .................................... AGTACTGCACTAGGAATTGTAGAGATCAAA 811912 36 100.0 30 .................................... CGTACCATCTATCAATTTACCGCAAGCTGT 811846 36 100.0 30 .................................... TTAAAAGATTTAAACTATCAAGCGTCAATT 811780 36 100.0 30 .................................... TTCTAAATGCTGGTGACTGCTTTGCATAAA 811714 36 100.0 31 .................................... TTGCTGCTAGACCCAAACAGTTTATTTTTAG 811647 36 100.0 30 .................................... TCCTTTTTTAGATAATGTGCGATCACGGAC 811581 36 100.0 29 .................................... TTTTACCAATGCTTCCATATCGCTTATAT 811516 36 100.0 30 .................................... TGGTTATACATTTACTAATCCATCAGCATT 811450 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 25 36 100.0 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Left flank : CGAAAAGCCAGAAGTGAAATCAATGGTAGAAAAATTAGCAGCTACTATTACAGAACTTATCGCATTTGAGTGTCTAGAGAATGAGCTTGATTTAGAATACGATGAAATTAAGATTTTAGAACTCATTAAGGCACTGGGAGTCAAAATTGAGACACAGAGCGACACTATCTTTGAAAAATGTTTTGAAATTATACAAGTTTACCATTATTTAACGAAAAAGAATCTCTTGGTTTTTGTTAATAGCGGAGCTTATCTTACCAAAGATGAAGTTATAAAATTATGTGAATACATCAATTTAATGCAAAAGTCAGTACTCTTTCTAGAACCTAGAAGACTCTATGATTTACCGCAATATGTTATTGATAAGGATTATTTCTTGATAGGCGAAAATATGGTATAATATTAGTAAAAGCACAGTAATAACAAGGAATCATCGAAACTGAAGTCCTGCTGAGACGAATGGCGCGATTACGAAAGCTCAAAAGAAAATTTTCTACGAG # Right flank : AAGCTAATTCTCATCTCACCGAGATGGATAGTTTTAGAGCTGTGCTGTTATTATGCTAGGACATCATTGTGGTGTTCTAGTTTTTTGTTATACTGAAATAAATTTTCAGAGAATGTGGGGGAAGGCGGTAATTAGATTAATTCAAGACGTAATTCAGAACTTAGTTGGCCAAGCTAACGAAATCACCCCAATTTATCAGTTTGATTGGGAAACTTATATATTGGCGACTAAAAAATATGAACGTCATTTAGAGGTGTGTCTATTAGTAGAAAATTCGAATTGTTTTTCGGATTCAAAGATAATGTGTCAATAAAAGAGATATGAAAGGCTATAATTCCAACCTTATGGTTAAAGGGCTAGGTTGTTCTACGCTTTACTTAATTATTAGTTTGACAGCGTTGGTTCTTTTAGTGATTGCTGGTGTTTTCTTTGTCATTAATACTTGCAAGCTTACAAGGAAAGCAGTGGAGAACCTATCCATAATCAACTAACAGCTATGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.20,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [60.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //