Array 1 47168-44319 **** Predicted by CRISPRDetect 2.4 *** >NZ_FJMD01000018.1 Legionella pneumophila strain 2532STDY5467639, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 47167 28 100.0 32 ............................ TAAACAGAGGGCTTGTTTTTAGTTTACCATAC 47107 28 100.0 33 ............................ TTTAGCGCCTCCTGACACGATCAAAATTTCTTT 47046 28 100.0 32 ............................ GGCGACAAATTCATCTAAATATAAAGGCAATC 46986 28 100.0 32 ............................ GTTACAGACAAAGTTTTTTAAAGGGTATAACA 46926 28 100.0 32 ............................ TTTGATGCGACATATTGAAAAAAACAAGGATT 46866 28 100.0 32 ............................ TGTTTAGTTGAATATCTTGTATGTGCTAATAA 46806 28 100.0 32 ............................ TTTTAAAACATCAGTTATTGTTAATGCGATTA 46746 28 100.0 32 ............................ ATTTGCGTCTAACTTCAATGATTTAGCTGATC 46686 28 100.0 32 ............................ TTTTGCCGCTCTTTGAGAGATATTACTGTTAA 46626 28 100.0 32 ............................ TTACTGATGCAAAATTATCAACAGACATTGTT 46566 28 100.0 32 ............................ AGTTGCTTGTAGAGTGCCTAATCCAACATCAG 46506 28 100.0 32 ............................ ATATTAGATGATCATGTTTGTGAATTTTGTGA 46446 28 100.0 32 ............................ TAGTACTTTGTGATGACTCTATAAGTCTTGCC 46386 28 100.0 32 ............................ AATACCTGATAGAAACCTTGACTGGTCATGTA 46326 28 100.0 32 ............................ ATGCCACAATAGTCACACGTACAAATTGCCCA 46266 28 100.0 32 ............................ TATCAGACTTAAACGAATCTCACTATAAAACA 46206 28 100.0 32 ............................ GGCGTATAATTATCTCGTATGTATTGCTCTAA 46146 28 100.0 32 ............................ AAAATTGTTTTTCTGCTCAAGAGATGGGGAAC 46086 28 100.0 32 ............................ TATGATGACGGCCTCCACGGAGAACTTGTTAT 46026 28 100.0 32 ............................ ATCACGAATGCACCCAAATTGCCTGTTAGTTA 45966 28 100.0 32 ............................ ATGTAGCGAAGGCGAGGTTCCATAATGTATAA 45906 28 100.0 32 ............................ CACTCGATGGGGTTTTCGGAGAATCATTCAGC 45846 28 100.0 32 ............................ ATTACCATTTTTTTAATCTGCTCAGATAATGG 45786 28 100.0 32 ............................ TTCCAGCTCTAATATTTTACACGCATCATATT 45726 28 100.0 32 ............................ CTGCGGGCTTGGAAATGATGAAGGCTGTTAAT 45666 28 100.0 32 ............................ TGTCTGCCGTGTCGCCGCCGCCAGAACCTAAC 45606 28 100.0 32 ............................ AATTGAACAGATAGTTGAAGAATCAGTAAAAG 45546 28 100.0 32 ............................ TTCTTAGTCCCTTTACACGCTGGGCATCTAAT 45486 28 100.0 32 ............................ TTGAGAGTTGCTCTTATGGCCTCTTTTGTAGA 45426 28 100.0 32 ............................ TAATTCATGAACGATAGGGTAGGTACTAGCAT 45366 28 100.0 32 ............................ TCATTTTGAACTGTAAATAAACCTTTCGTTAA 45306 28 100.0 32 ............................ ACTGTGGTGAGTATGGTGAGAAGTACGGAAGA 45246 28 100.0 32 ............................ ATGTGCACCTACACCGTGAATGTGCCGGTATT 45186 28 100.0 32 ............................ TCTGAGCTTGAGCAGCTTGAAAAACAAATACA 45126 28 100.0 32 ............................ AAAACGTGCTCCACCATTTAGTTGACGGGTCA 45066 28 100.0 32 ............................ GCTTGTGCCATGCGCTTAACTATTGCCCTTTC 45006 28 100.0 32 ............................ GATATGTGAAGAAGCAAAGCAAGTAATTGCTA 44946 28 100.0 32 ............................ TACTAGCCCTTAGCTATGACGAGCTCGACCAG 44886 28 100.0 32 ............................ GATTGAGATTTCAGTCGAATATATTTTACCTG 44826 28 100.0 32 ............................ TGCCCTGAACTTAGATTAATAATTACTCCATG 44766 28 100.0 32 ............................ GCTTGCACTTAGTAGGTAACGCTATCGTCAAT 44706 28 100.0 32 ............................ TATAAAATTTAATTCAGCGTCATATACCGGCG 44646 28 100.0 32 ............................ TCAGCAGCAAGACCCGGGGTCTGCAACTCAAG 44586 28 100.0 32 ............................ AAAGCCGCCGACATACGCCCTAAACTTGGTGT 44526 28 100.0 32 ............................ AGTGAAGCTATTTTTAACTGGGATAACATGAT 44466 28 100.0 32 ............................ TTTTGCCGCTCTTTGAGAGATATTGCTGTTAA 44406 28 100.0 32 ............................ GCGATATTTTTAATCAAGAATTCGAAACATAT 44346 28 96.4 0 ...........................G | ========== ====== ====== ====== ============================ ================================= ================== 48 28 99.9 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CGGTGTCTCGTAAACAGCCTACAATGAGCCAATCAAAATTGAGGCGGTTAATTAAACGTAACTCCTTGACAGAAGATGAAATCAGGCAATACAAGGCAAAGATGTTTTCCAAAGGTCTGGATAATCCATATATTGAACTTGTGAGCGTATCAAACGGGCAAAGGCACCGACGCTATATTGAGTTTGGCGAATTGTTCAATGAGCCAATTCCTGGCCTCTTTGATCAGTTCGGCCTTTCTAACAGTGCTACTGTTCCATGGTTTGATTAAATTTTAGAACAAGGTAAATTCCTTGAGTTCGATAGGTTAAAGTAAGGAGATATAGTTTGGTCAAATGCTTCAATACTTGATTATTTCGATACTTCTAACGACCAATAAATTTAGTTCTTTAAAAATTTGTCTTAAAATCAATTGGTTATAAATTAGCTGAAAGATATTGGGTAAATCGATTTTTTTCAGCTAACTTTCTGTTATAACTATTTTTTTAAGATTTAGAGCAGA # Right flank : TTATTATGTTAAAGGTGTTAGCACGCTACGCAGCAAGGTCGGACCAAGGCCTGACCTTGTTTTGATTAGGAAAGTCTAATCATGACTATAATCTCCATTTCTCTTTATGGAGTACAGCAACCGTTAGTCAAATCTATAAATAACCTAAACAAATAAAAATAAACTCTCTAGTTCCATGGAAATGAGTGTAATTGGATCGAAGTCAAAATAAATTGTGAAGTCTGATTACTGAGAAAATTAAATTTAGTTGATGAGTATCTATTGAATCATGAGAATAATCTAATGGTGTACGTTAATTATACACGTATGCTAAAAATTACTACCTGATGAGCTAGGATATTCTCTACCGCGTTGTTTGAATCACACTGAGTCAATCGTAAATTTATTTAGCATTACTGAGAATTATTTAATCCTCAAAAACTCAATAATAAATTTAGATATTTCACAAAATCATACGGTGAATGCTCTCCTGGTTTCGTCAGTTACTGAAATAGTGGTTA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //