Array 1 89240-88082 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_ANDU01000014.1 Streptococcus agalactiae LMG 15084 ctg120000757482, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                	Insertion/Deletion
==========	======	======	======	====================================	===============================	==================
     89239	    36	 100.0	    30	....................................	TACCCTTTTTATTTGCCAAAAATGGGTTTT 	
     89173	    36	 100.0	    30	....................................	TATTTCTACTGCTACAAATTTTGCAAGAAG 	
     89107	    36	 100.0	    30	....................................	ATTCCTCAAAACAAAACCAACAAAAGTTAA 	
     89041	    36	 100.0	    30	....................................	TCGTCAATGGATAATTTACAGCTGACACAT 	
     88975	    36	 100.0	    30	....................................	TCGCACATGGTTCTCACCTCCAATCTAAGG 	
     88909	    36	 100.0	    30	....................................	ATTGATTTTTTTGAACGAGTGGTTCCTGGC 	
     88843	    36	 100.0	    30	....................................	CGTACCATCTATCAATTTACCGCAAGCTGT 	
     88777	    36	 100.0	    30	....................................	CCGATTATTTCCTACATAATACGCACGTTT 	
     88711	    36	 100.0	    30	....................................	AACTGTGTGATACTTTTCGTTTTTTTCTTT 	
     88645	    36	 100.0	    30	....................................	TTTTATAAGTGATAGAGTGTGCAACACCGT 	
     88579	    36	 100.0	    30	....................................	TTAAAAGATTTAAACTATCAAGCGTCAATT 	
     88513	    36	 100.0	    30	....................................	TTCTAAATGCTGGTGACTGCTTTGCATAAA 	
     88447	    36	 100.0	    31	....................................	TTGCTGCTAGACCCAAACAGTTTATTTTTAG	
     88380	    36	 100.0	    30	....................................	TCCTTTTTTAGATAATGTGCGATCACGGAC 	
     88314	    36	 100.0	    29	....................................	TTTTACCAATGCTTCCATATCGCTTATAT  	
     88249	    36	 100.0	    30	....................................	TACTTGACGAATTGAAGATGACGGAATTTA 	
     88183	    36	 100.0	    30	....................................	TGGTTATACATTTACTAATCCATCAGCATT 	
     88117	    36	 100.0	     0	....................................	|                              	
==========	======	======	======	====================================	===============================	==================
        18	    36	 100.0	    30	GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	                               	       

# Left flank :   CGAAAAGCCAGAAGTGAAATCAATGGTAGAAAAATTAGCAGCTACTATTACAGAACTTATCGCATTTGAGTGTCTAGAGAATGAGCTTGATTTAGAATACGATGAAATTACGATTTTAGAACTCATTAAGGCACTGGGAGTCAAAATTGAGACACAGAGCGACACTATCTTTGAAAAATGTTTTGAAATTATACAAGTTTACCATTATTTAACGAAAAAGAATCTCTTGGTTTTTGTTAATAGCGGAGCTTATCTTACCAAAGATGAAGTTATAAAATTATGTGAATACATCAATTTAATGCAAAAGTCAGTACTCTTTCTAGAACCTAGAAGACTCTATGATTTACCGCAATATGTTATTGATAAGGATTATTTCTTGATAGGCGAAAATATGGTATAATATTAGTAAAAGCACAGTAATAACAAGGAATCATCGAAACTGAAGTCCTGCTGAGACGAATGGCGCGATTACGAAAGCTCAAAAGAAAATTTTCTACGAG
# Right flank :  AAGCTAATTCTCATCTCACCGAGATGGATAGTTTTAGAGCTGTGCTGTTATTATGCTAGGACATCATTGTGGTGTTCTAGTTTTTTGTTATACTGAAATAAATTTTCAGAGAATGTGGGGGAAGGCGGTAATTAGATTAATTCAAGACGTAATTCAGAACTTAGTTGGCCAAGCTAACGAAATCACCCCAATTTATCAGTTTGATTGGGAAACTTATATATTGGCGACTAAAAAATATGAACGTCATTTAGAGGTGTGTCTATTAGTAGAAAATTCGAATTGTTTTTCGGATTCAAAGAGAATGTGTCAATAAAAGAGATATGAAAGGCTATAATTCCAACCTTATGGTTAAAGGGCTAGGTTGTTCTACGCTTTACTTAATTATTAGTTTGACAGCGTTGGTTCTTTTAGTGATTGCTGGTGTTTTCTTTGTCATTAATACTTGCAAGCTTACAAGGAAAGCAGTGGAGAACCTATCCATAATCAACTAACAGCTATGA

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:58.33%AT]
# 	Reference repeat match prediction:         R [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-0.20,-4.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: NA [60.0-56.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,4.87   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
//