Array 1 129125-126679 **** Predicted by CRISPRDetect 2.4 *** >NZ_GG667604.1 Veillonella dispar ATCC 17748 Scfld0, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================== ======================================================================================================================= ================== 129124 33 70.6 44 A...T......GAA.....GC-....T..G.... CTCAACAAAACGCAATGCTCATGGATTTATTAAAATATAAGGGA 129047 33 88.2 44 .............-.........A.A.....G.. TAGTTAAAGCATTATATAAATTCATTATTACAACCTTATATAAG T [129037] 128969 34 82.4 45 ..A........TGT.......C...A........ TAGCATTATGCGTAATTAGTAAAGAATGTGAGAAATGGGAGGAGG 128890 34 85.3 41 ...........GAA...A...C............ TCAATCTACCGAAAAGCCTGCTGAAAAGCCTAAAAAAGCAG 128815 33 88.2 43 .............-.......C.A.A........ TTTAGACGCTATCAATGGTAGTCAACTATATGCAGTAGTTGAG T [128805] 128738 34 94.1 45 .............TA................... GAAATCATCAAGAATAGTACCTAAGCCGAGTGATTGGCTACTATG 128659 34 94.1 44 ...T..........A................... ACGCTAGAAAATTGCAAGAAAAGGAACAATTACCAATCGTAGAG 128581 34 94.1 43 .............TA................... TTATTGGAGGTTTAAAATGAAAATCTTTATTAATTATCAACTA 128504 34 85.3 43 .....A........A......C.A.A........ GAAAATCGGTATATTTTGCCTTTGGAGATTGGCTTTAGGTTTG 128427 33 85.3 119 .............-......GC.A.A........ GTGAAAAGCTACCTATTCAAGATAGAAAATACGTAGCTACTGTATTTATGTCCCCTGGGGATTATTAAATTTAACCACCTGGTATATTAATCTACAAAACACAATGTTATAGGATTAGT T [128417] 128274 34 91.2 44 ...........T.A.......C............ CCAACAATAAGGGTTATACATACATCAACTTGCGAGTATTCGTG 128196 34 100.0 45 .................................. AAGGTGCGTATCGTAGATAGCATTGAGGAATTATGGAGCGGTAGG 128117 34 100.0 45 .................................. TTACGTAAACAGAATGAAATGCTTATGAAATTGTTACAAGACAAG 128038 34 100.0 42 .................................. AGCCAATCATGGAAAAGACATACGTTATAGACAGCAAATTAG 127962 34 100.0 43 .................................. AAGCGGTAGCTTTAATGAAACATGTAAATTACTGTCTTTCGAG 127885 34 100.0 42 .................................. AGCCAATCATGGAAAAGACATACGTTATAGACAGCAAATTAG 127809 34 97.1 44 ..................A............... CGTATGGGTATATTAGCATCAACGGTCTATATGGTTATTGCGAG 127731 34 100.0 45 .................................. AAACACACAATTAGCGGAGTGAATACATTTGTACTAGATGAAAAG 127652 34 100.0 45 .................................. CGTTCTCCTCTCTCATGGGTAAAACTACAAAGTTCTGCTTGGGGT 127573 34 100.0 46 .................................. ATGATTTTCTTTGGTTTGATGATGAGTACATCTATGAGAGCTTAGT 127493 34 100.0 45 .................................. GGCTGTTAAAGCTAAAACTAGCTCAGAAAAGGACTTATTAAAAGT 127414 34 100.0 43 .................................. AGTACAAAAAGCGGTAGCGAATACATGATAAACCTAAGCCAAT 127337 34 100.0 44 .................................. TTGGAAAGTGGACTGGAACGTAAAAATGGAGGACAAAAATGAAT 127259 34 100.0 44 .................................. ATACAGACATTTTAGTAGGCGACCTCGCCAAATTGCTAAACCAG 127181 34 100.0 44 .................................. ACTAATTCTGAAAAAGAGCTTTTAAAAGAACAAAATGCTATGTG 127103 34 100.0 45 .................................. ATAAAACAGTTGAGTTATACAATAGAAATAGCGAATATTATTGGG 127024 34 100.0 43 .................................. TTTGTACAAGGTGATAATTATTGCTTTGTTACCGCAAAAGGCG 126947 34 100.0 43 .................................. TAATTCCTGTAAATGTAACTAAGAATGATGAGCAATATGTAAG 126870 34 100.0 44 .................................. TTTACATCTTTAAAACTACATTTGGTTATGAGCCTGTAATTAAG 126792 34 100.0 46 .................................. AGAAGAACGCAATTATTTAGAGAACTACGACAAGGACGTATGTGAG 126712 34 100.0 0 .................................. | ========== ====== ====== ====== ================================== ======================================================================================================================= ================== 31 34 95.4 46 TTTCCGTCCCCATCTGGGGATTATTTAATTTAAC # Left flank : GGCGAGTCTCTTCTGCAATATCCATAAATAAATTATTTAATGCACAGAAAATAAGCGTCAATGTCGTAAGCCTTTGCTGACCATCGATAACATCAAATCTAGTCGGATTATTTTCATTGCTAATCAAAACAATATTGCCTAATAAATACCCAGGCAACGTATCTAATCTATCTGTATAGTTATCCGTATCTTCCTTGAAATCAGAAAAAAGTGTATCTACATCTTTATCTGTCCATACAAAACTCCGTTGAAAGTCAGGTATAACAAATTGATTTTTATTATCTAATATCCCCTTAATATCCTTCATTAAGGACGTAATTTCAGCCATGATATCCTCCCCATACCAAAATTTATTTTCTTATATCTATTAGATCATAAAAATAAGATGAAGATCAACACTTTAAATTCATCAAACTCTCAAAAGGCAAAATATTCTATACACAAAATAACCACCCTATACAAGAGTGGTTATTTTTGTCTTTAAAAGAAAATATTGATTT # Right flank : CCTGTCTCTGAAACAATAAGTATTTACTGGTTCCAAAACCTAAAAAACGGCGGAGATTGTATTTCGGCCTCAAAAGGCACTTTAGCCAGCTAAAATAATACCGTTTAATCGCGCCACTATCACAACGGCGCAGATTTGTTTTTTCAAGGGTTAAATCTAGGTCTATTATAGCATAGCTTCAAGGGAAATGAAAAATATATGAAAACAGAGCTATCTCGTGACAAGATAGCTCTGTAAGAGAGTAAATCGTTATTTGAGTTGTCTTAATGATAACCTTTTATTTATTTCTCCCGTATGTTATTGTTCTCCCTATATTTCCTCCTCTCTTTCTCTCCCCCTATTACTTCATCTCCCCTACTTATTCTTCTCTTCCCCCTAACAGTTTTATCTTGTTAGGTCTCTCCAGGCGATAAATAGTTCGGCCACGACTTGTGGGTTTTGGCTAAGTTTGATGCGGGCTAGCATTTTACGCACGTAGTTACAGTGTTCTAGCATAGCTT # Questionable array : NO Score: 2.79 # Score Detail : 1:0, 2:0, 3:0, 4:0.77, 5:0, 6:0.25, 7:-0.23, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTTCCGTCCCCATCTGGGGATTATTTAATTTAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.30,-9.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-51] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.64 Confidence: LOW] # Array family : NA //