Array 1 4413-121 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKFY01000038.1 Acinetobacter brisouii strain TUM15068 sequence038, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 4412 28 100.0 32 ............................ CTGGTTTTGATCTTATTTTGTGCCGTTTTATG 4352 28 100.0 32 ............................ ATCACGCGGCGGCTACCATAACCGTGAGTGGG 4292 28 100.0 32 ............................ GCCTGAAAGCGTGGAAATTAACGGGCAGATTA 4232 28 100.0 32 ............................ GTCCACAATCTCGCCATTGTGCAAAATGTTGT 4172 28 100.0 32 ............................ AAAAAGAAAATCCATTAAAGAGTTGATACCTG 4112 28 100.0 33 ............................ TAAACAGCAAAGGTTTGTCGAGGAATATCTGAT 4051 28 100.0 32 ............................ AGTTGGGTGCTATAAATTCAATACTTCTTAAC 3991 28 100.0 32 ............................ ACGCAAACACCACTCCATAAATGCAGGGCATA 3931 28 100.0 32 ............................ ACCGCGATTTTTTGAGCATCGGTTAGCGTATA 3871 28 100.0 32 ............................ TTGAAGCTGAAAATATCCTAGGCAGTTGTGAC 3811 28 100.0 32 ............................ GTTTGGATTAGTTTGCAATCATTATTTTAAAA 3751 28 100.0 32 ............................ AATTCCAGAAAATGATCCTGTTTGGATTGAAA 3691 28 100.0 32 ............................ AATACGGTGTACCATTCCCCCTTCCTGCGCTA 3631 28 100.0 32 ............................ GAAAGAGAACCAACAAAACCAGTTAAAAGAAC 3571 28 100.0 32 ............................ AGAGCGATTAAAACCGCTCTATCTCGATTACT 3511 28 100.0 32 ............................ TGCGATCATTGTGAAATGCGGTTGAGTGTAGT 3451 28 100.0 32 ............................ AAACTATTTCGGCACTTAAACGCCAATAATTG 3391 28 100.0 32 ............................ GCTCATGGGAAGCATGGCAAGCAGCAGCTCAA 3331 28 100.0 32 ............................ AAACGTGATGATAGAAGGGATTCTGGCTTCTT 3271 28 100.0 33 ............................ ATGAAGCGCCCAACTCAAAAAACAACTCCTGAA 3210 28 100.0 32 ............................ AGTAGATTCTCACAAACAACAGCACCATAAAA 3150 28 100.0 32 ............................ TGTTGGTTCTAGCTCTGTTTCTGATCCTGCTT 3090 28 100.0 32 ............................ TTGCCACGACATAAAATCATGCCGCTGCTTTT 3030 28 100.0 32 ............................ AAGACTTTTCTGATGATTGTTTGTTTCAGTAA 2970 28 100.0 32 ............................ TGCGTAGGCATAAAGATAACCGACTGTTATTT 2910 28 100.0 32 ............................ GTGTTGGTGATGCAGGCCCATCAAGTAGCGCT 2850 28 100.0 32 ............................ TGCCGAAGCGAAGTTACCCTCTACCGCCAAAG 2790 28 100.0 33 ............................ GTTTCGGGGATACCGTTTGGTCTGTTCCTGACA 2729 28 100.0 32 ............................ AATATGTCCATGCGTGTAATCCCACGATATGC 2669 28 100.0 32 ............................ TTCTGGCAAGCCGTTAGCTGAACGAGTTATTA 2609 28 100.0 33 ............................ ATATGCGGTATGCTCGTTAATTTCCGCTGTGGT 2548 28 100.0 32 ............................ TCTACCTCAAAAGTCGATTCAAGCGGTTTTTC 2488 28 100.0 33 ............................ GAACAAGCTTATCATTGGCACGATTTTGCGCAT 2427 28 100.0 32 ............................ TGGTCAAAAATCCTGGAATAAAGGCTTAAAGG 2367 28 100.0 32 ............................ ATTGGCAGCACTAGGCATCACTGGAGCTTTGT 2307 28 100.0 33 ............................ TTGTTATGAAAACTATCATCATCGAGTTCGTCT 2246 28 100.0 32 ............................ TAAGCAAGGCTCTAATCAGTGAATGAAGATCA 2186 28 100.0 32 ............................ GCTTTGCTCAGCTTCAATAAGCATTTGCTCGT 2126 28 100.0 32 ............................ ATCAGCGTCATAAATAACATTACCGCTTGAAT 2066 28 100.0 32 ............................ TATATTCAGATAAATTTCTTGATGTTGGGATT 2006 28 100.0 32 ............................ GCACCTATTTGTAAAAGGCACTCACTCATCGG 1946 28 100.0 32 ............................ ACAGCAAAATTGCATAAAAAAGACTATGATTC 1886 28 100.0 32 ............................ TTAGCCTTGCGTGTCTTTTTCTGTCCTTTTAA 1826 28 100.0 32 ............................ GTTACAGCCTATTCAGGTCGTGGCGTTTTATT 1766 28 100.0 32 ............................ GTGACGTAATCGTCAAAGTCTTAAATTTATCA 1706 28 100.0 32 ............................ TGATGTAGGAGTTAGGGTTTTTCTCCACGCAT 1646 28 100.0 32 ............................ CAACCATAATTTCCTAAAGTACAGCCAACACC 1586 28 100.0 32 ............................ TATTGTTAATCAATTAGAAAACACAGCAACAT 1526 28 100.0 32 ............................ ATTTGAAAGCCTTTTAATTCGAATTGTTCTTT 1466 28 100.0 32 ............................ ATTAAATACATTTTTAAAATTGGCATTGTGTT 1406 28 100.0 32 ............................ TACCTGTAGACACAGAATCTTGTTAGGGCGAC 1346 28 100.0 32 ............................ GGTAAGTCGCAAGCAAACTAAAAACATAATCA 1286 28 100.0 32 ............................ AATTCCCCAATTTATTAGTATCAGGCAAACGA 1226 28 100.0 32 ............................ TTCTGGTGATGTTGTTTATATTAATTTATAGG 1166 28 100.0 32 ............................ TGTTGAGCTTTTTGAAAAATCTAAGGCTCTTT 1106 28 100.0 32 ............................ GCCGTTTCAAGCTGTTGCATGCTATTCAGCCA 1046 28 100.0 32 ............................ ATCTTCAGTCGATTTATACATTGAATAATACT 986 28 100.0 32 ............................ AAGATCGGGAGTTTTTCGGCTATGCCGACACG 926 28 100.0 32 ............................ AATTTCGGCGATTCAGCAGGTTGCTGAGAGCG 866 28 100.0 32 ............................ TGCGTATGCAGTGCCGTACAAACGACCAACCG 806 28 100.0 32 ............................ ATTGATTAGAACTCTCATGGGAAAACCACCAA 746 28 100.0 32 ............................ TTGCACTCTTTTCTATCCAAATTTTCAGCTTT 686 28 100.0 33 ............................ TCATTGCAGCAGTTATCACATGATCCATGCGCT 625 28 100.0 32 ............................ ATTTGATTTAGATTGATTAGAAGAAACAGAAG 565 28 100.0 32 ............................ AAATCCTCCAGACTTGGTTTTGTACTTAAAAT 505 28 100.0 32 ............................ GTGCTTTGGCATCAATGGGGTTTGACTCGTTG 445 28 96.4 32 ...T........................ AAGTGACGGGCGTGTGCCAATTTTCCGAGTGG 385 28 100.0 32 ............................ TTTTTCGATATTGTTAGGCAGTGTCATCGTGT 325 28 100.0 32 ............................ TTGCCATGCCTGCAATCATTGTGAAATGCGGT 265 28 100.0 31 ............................ AAAAATTTTTATCGAGTACGCAAATATACCG 206 28 96.4 31 .............C.............. TCGTGTTCGGGGCGGGAACGCATCCGAAGAT 147 27 78.6 0 ....................-.G.TGTG | ========== ====== ====== ====== ============================ ================================= ================== 72 28 99.6 32 GTTCACTGCCATGTAGGCAGCTTAGAAA # Left flank : AAGAGTTTTGCATCGAGAATTTCGTTATCGGCTGCCCAGTCTAAAGACAAGGTTTGTAATACCAACGCTGAGCTTTCTGCAAAAAAGTCTTCTGTGCCTTGCCCTAAATGAGCATCGTATTGACGCAGTGCTGTGACCCCAAAGCGAATAAAATCACGAATCGTGCTTAAGTTTTCAGCCGCTTCATTTAAACTTTCAGGGCTAATCGTCAATCGCTCCACTCAGAACTCCAAATCTATAAATTTATATGCTCGGTATTCTACCCTGTTTTAGCGTGATTTTTAATGCTTATAGCGTCTTTGGGCAAATGATCCTCTCGATCAATGTAAATTTTATGTATTTTTTAATTTGACAGATCATGACTTTTGACCCAATATTTTTAGACTCTTTAACAGTTTAATAAAATCAAATAGTTATAACTCGGCTAAAAAATTTGGGTCTTTTGGGATTTTTTATATTTAAGCCTTTGTTATTTCTATTTTTATGATAATATTTTTACT # Right flank : GTGCTGAATTAGCAGGAGACTTTCACTTGGGAGATTCTAGGCAGCTAACCGATAAAAGTCTTCTGCCATTTGATTTGGTGTCTTAAAATCCAAGCCTTTTTGAATTCTTCGTTGATTATAA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCATGTAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCATGTAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.40,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.18 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 17568-22640 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKFY01000038.1 Acinetobacter brisouii strain TUM15068 sequence038, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 17568 28 100.0 32 ............................ AAGCGAAAGAAAAGGGCGATTATCTCGCCCTT 17628 28 100.0 32 ............................ AAATAGACCAATGTATTCTTTCTAATTTGTCA 17688 28 100.0 32 ............................ TTACTTGCCATATTTCTTGATGTGATTTCTGA 17748 28 96.4 32 C........................... TATTGTAAGTTTGGCTGTGGCACGTCAAAAGG 17808 28 100.0 32 ............................ TTGCCACGACATAAAATCATGCCGCTGCTTTT 17868 28 100.0 32 ............................ GGATTTTTTGACTTTCTCCAAAGCTTCATCTT 17928 28 100.0 33 ............................ CAAAATAATTTACAGCACCTTTCAAATACGGAG 17989 28 100.0 32 ............................ CAATGAATGTGAATGTCTCAATGCTTGCTAAT 18049 28 100.0 32 ............................ TGATTGCTATATCACCGATTCAGACTATGCCT 18109 28 100.0 32 ............................ TGAGCTAAGAGCGAGTTTTACTTGTTCTATTT 18169 28 100.0 32 ............................ GCAAAGGTAAAAGCAGCGGCATGATTTTATGT 18229 28 100.0 32 ............................ ACGTGCCAAAGCTGCTACTGGTGCTGTAGCTG 18289 28 100.0 33 ............................ GACTCGCAACGCTGTAGAAAATGCAATCCGTGA 18350 28 100.0 33 ............................ CAACTGTAGGTACTGCATCAGGCGCAACGACTA 18411 28 100.0 32 ............................ ATCAAGTTAAAGTCCGAAATATGATCCTGAAA 18471 28 100.0 32 ............................ AACTTGGCAGATGTATGAAAAGGCACAGGATT 18531 28 100.0 32 ............................ AAAGATGGTGTCGAAGCAACACTTAGCTCTGA 18591 28 100.0 32 ............................ TGCGAACAACTCGAAGTCAGTAGCTCAGATTT 18651 28 100.0 32 ............................ TTTGCGGATAATCACGCCGTCTTTCTTAACTT 18711 28 100.0 32 ............................ AAACAGGCTATGGTTCTTACGGTCGTTGTAAT 18771 28 100.0 32 ............................ TGATAAGAAATCAGGATTTGACCACATGAACG 18831 28 100.0 32 ............................ ATACGGCAAGTTGTTCTGAACGTACAAGATGC 18891 28 100.0 32 ............................ GTCACCATTTGACCGTGATGCCATTCCATTCA 18951 28 100.0 32 ............................ CGACAAAATATTCCTAATCAATAAAAGTAATA 19011 28 100.0 32 ............................ CTCAAGCGAGGTGTACGAAAAGCTCTTGCAAT 19071 28 100.0 32 ............................ ATTGAGCGTTACAACTTGGGTAAATACACTCA 19131 28 100.0 32 ............................ ATAGCGTAATGCCTGCTGAATTGCATCGGCTG 19191 28 100.0 32 ............................ AAATTGTTCCGCCACCTGTATATCCAATATCC 19251 28 100.0 32 ............................ TCTGCAATTAATCGTGCATCTTCATCTTGCGC 19311 28 100.0 32 ............................ CACAAGATCAAGAACAAAAGCATTTAAGAAAC 19371 28 100.0 32 ............................ ATTCATCGGCAAGATCAACAGACACATAATCA 19431 28 100.0 32 ............................ TAAACGTCTCAATTTTTCACATGCTGCGGTTA 19491 28 100.0 32 ............................ GTAGAATACACAGGAAATCTCGAAGCTGAGTT 19551 28 100.0 32 ............................ GCTTGAATCAATTGCAACGACATTGCCGTTTG 19611 28 100.0 32 ............................ TCACCGTATGTGTTGACCATTGCCAACGCTGT 19671 28 100.0 32 ............................ CTCGGAATACAATTTGTATCGAGTCGCGCCCA 19731 28 100.0 32 ............................ AATACGCCACATTGCGCTCAATTGTCATGAAT 19791 28 100.0 32 ............................ ACTGTATTTTCTTTCCTGCGCTCTAGCTTTTG 19851 28 100.0 32 ............................ AAGTGCGTAATCTGAAAAATGTAGACTTCGAT 19911 28 100.0 32 ............................ TGTAAAACAGGGAAACTCACTTCAGTGGCCAG 19971 28 100.0 32 ............................ AATATACTGGGCAATGTCGGTACTCAATTGAT 20031 28 100.0 32 ............................ TTCAGAATACTGTATGTGGGTTGAGTTGTTTC 20091 28 100.0 32 ............................ TGCAGAAGAAAATGAAGAAAAAACAATTTCGC 20151 28 100.0 32 ............................ TCGGCACGTTGCCAATTATCGTCAGGATCACC 20211 28 100.0 32 ............................ TTGTGGTTAATATCCGTGTATAGAATCCCCCA 20271 28 100.0 32 ............................ TTGCGGTGCAAGTTGCTTGGTCTGCTTGGATG 20331 28 100.0 32 ............................ AGCATTGTGATTAACATTCAGCGTACAGCGAC 20391 28 100.0 32 ............................ TGATTATTTGGAACTTCTTCATAAGGTTTCTG 20451 28 100.0 32 ............................ AACACCTTGAGCAGACAAATCAAGCAAATCAA 20511 28 100.0 32 ............................ AGAAACGCTAGACTGAGAATCGCGTACACTAA 20571 28 100.0 32 ............................ TCACGCAAAAAGCGATCAAAAGCAGTTCAGCG 20631 28 100.0 32 ............................ AGATAACCATGTTCTTGTTTTCAAAAATATGA 20691 28 100.0 32 ............................ TGTTGCATGGTTTTCCCCGACATTTCGAGCAA 20751 28 100.0 32 ............................ AGATTGGATAATTTGCAGCAATGGTATTAAAG 20811 28 100.0 32 ............................ TCCGAAACATCAATAACGTGGTGCTGCAAACA 20871 28 100.0 32 ............................ CGTAGCAACGCTCACACTGTTCACTGTTGGCA 20931 28 100.0 32 ............................ TGAAAAACTATGGGCTGTAAATATCCCTGAAG 20991 28 100.0 32 ............................ TCGACCTTTTGCCTAGTGGTTTTTGTGTTCCT 21051 28 100.0 32 ............................ TTTTCAAACCGACCAGTGCGCCCAGTTAGTGC 21111 28 100.0 32 ............................ AAACTGCTCAAAAGCAGCAATGAGTTTTTGCA 21171 28 100.0 32 ............................ ACAGACAAATTATTCTCAGTCTGTTAGTTATA 21231 28 100.0 32 ............................ TTTAAAAGAAAAGTTTCAAGATGTTCATAAAA 21291 28 100.0 32 ............................ TCTGATTTAGAAGAAATATATTCTGTACATTA 21351 28 100.0 32 ............................ AACCAAGAACGTGCCATGAAGGAATGGCAAGC 21411 28 100.0 32 ............................ ATTCTTGTTCATCACAACAATGTCTGTCAGGT 21471 28 100.0 32 ............................ ATTCCGATCAATGTAGCAAGTTTTTTACGTGT 21531 28 100.0 32 ............................ AAACTAAAGTTTTTCAGGTTCCACACATCCGC 21591 28 100.0 32 ............................ TGCTGACAATGAAATTGCTGTCGTTGATTGGG 21651 28 100.0 32 ............................ TAATGAAAATGGCACTGAACAGCCTTTACCTA 21711 28 100.0 32 ............................ GAAAGAGAACCAATAAAACCAATTAAAAGAAC 21771 28 100.0 32 ............................ TGTTACCGACAAATCACTTAAAACTGTTTCAG 21831 28 100.0 32 ............................ TTCCATGGCTAATGCGCGCATGTTGTCTAGGT 21891 28 100.0 32 ............................ TGTGTCATTAAGGTTATATGTGATTGTCTTCG 21951 28 100.0 32 ............................ TCCCACGAACAGTAGTACAATCCTTCACATTT 22011 28 100.0 33 ............................ CATTGCCCCTCAGTTAAAGCGTGACTTTCCTCT 22072 28 100.0 32 ............................ GCCGTCACAGCGCCAAACGCATCCACGCCAAG 22132 28 100.0 32 ............................ ACTAGAGGGCATTGCATCAAAATTAACAGTCT 22192 28 100.0 32 ............................ GCAGAAATCATGATCATTGGTCGTTCTGGTGA 22252 28 100.0 32 ............................ ATATCGAGCAGCAACAGTGCCCGCAGCTTTCG 22312 28 100.0 32 ............................ ACCTGAGACCTGTACTGCTTTGTTAATTGTTT 22372 28 100.0 32 ............................ ATGCTGAAAAATCTGAAAGCAGGGCAGTACAC 22432 28 100.0 32 ............................ ATATTTCCGTTATCACTTCGTTAGTTTTCTTA 22492 28 100.0 33 ............................ CTAGCTTTGTCTGCATTACTTAACAATACCTTA 22553 28 100.0 32 ............................ ATAATAGCAAATAAAACAATAAAATAGTTTAT 22613 28 82.1 0 .....................A..TTCG | ========== ====== ====== ====== ============================ ================================= ================== 85 28 99.7 32 GTTCACTGCCATGTAGGCAGCTTAGAAA # Left flank : AATATTCGTAAATGGTTAGAACGCTTGGTTGACTATGTTCATGTCAGTTCTATACGTGAAGTGCCTGAGAATAAAGTCACAGGTTATGCCATTTATAAACGTAAGCAATTTAAAACTAATGCTGAGCGTTTGGCACGTCATCGTGTAAAACGTGGAGATATTGGGTTTGATGAAGCACTCGCTCGGTATAGCCATGTCGTGAAGACCACCAACTTACCGTATATTGACATGTTGAGTTTAAGCACTTCAGATGAACAGGACAAAAAACGATTTAAATTGTTCATTGAAAAGAAACCTGCTGAAAAATCTGAAACTCAGGTTTTTAGTACTTATGGATTAAGTTCAGAAGCATCTGTACCCGAATTTTAACCCAATATTTTTTGACTCTTTAACAGTTTAATAAAATCAATAAGTTATAATAGTGAGTGAAAACTTGGGTCTTTTGCTAGATTTTAGGTTTAACTCGCTGTTATGGCTTTATTTTTTGTGCTAATTTTATT # Right flank : GAATTTAGTGATGATATAGGGCAGTTATATCGAAAATATGATCAAATTATAGAAAGTTTGTTACTTTAAATTCACAGTGAGCAGAGGCAAAAAAAATTATGATATGTACATAAAGCAGCAAAATTATTGGGGGTATGAGATATGGATCACATTTTAGTTGAATTACTTCAAACTATTAAACATGAGAAACAAGGCTGTGAGCCAAAAGTATATGATATGGGGACATTATTAAAAGTTATCCATGATGCTCATGATACATATTTGGTCACGGCAGATGATGAACTCTTTTCATTTTCATTGCGCAAAGTCGATGAAGGCATCGTTTGGGTAAAAGTTTAAAGCCTTAAATATCATCTTAATAATTGAAAGCCCTTTGTTATTACAAAGGGCTTTTTTTATATCTAAGGATTTTAAGTTTTAGATTGTCAACAATTCAAGAAAATTAGATTAAAAAATAGTCCAAATTTCGTCTTATAGCACCTTAGTCGTAGAATGTGATT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCATGTAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCATGTAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.20,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //