Array 1 3666-34 **** Predicted by CRISPRDetect 2.4 *** >NZ_KQ948608.1 Streptomyces avermitilis strain DSM 46492 PRJNA299228_s028, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ================================= ================== 3665 30 96.7 31 .............................A CACGGCTGTTGAGCCGGACGGCGCCGAGACC 3604 30 100.0 31 .............................. CCCGATCGAGGGCGGTGTGAGCATGAGTATC 3543 30 96.7 31 .............................A CGTCGTGGGACTGGTTGGCCGCCGCGTTGAA 3482 30 96.7 31 .............................C AGGTCGCCAGCCGCTGCCCGGTGTCGCAGTC 3421 30 96.7 31 .............................C CCCATGATGATTTGGCCAGGCACCCGAACCA 3360 30 93.3 31 ............................CC ACTAACTCAAGACGCAATGATCACAATCGGA 3299 30 100.0 31 .............................. CGATGATGCCGGCGTCGACGGCGATGGGGAA 3238 30 96.7 31 .............................T CGTTGAAGCTCATGCCGGTGCGCTTCTCCAG 3177 30 96.7 31 .............................C CGCCCGCGCCGCACTCATCCCCGACCAGGCG 3116 30 96.7 31 .............................C CCGTGAGCAGCCGACGTTCGGTGACCGGGGG 3055 30 96.7 31 .............................C CGTCGATGAGCGCCTAGCCTTGCTGGAACGA 2994 30 96.7 31 .............................T CCATGCAGCACCGCGGCGACCGCCACCCCCC 2933 30 96.7 31 .............................T TGGGGCAGTAGGTCAGCGAGGATGCCGAGCC 2872 30 100.0 31 .............................. AGAACTACGACGAGATGGCCAAGAAGACCGT 2811 30 96.7 31 .............................A ACGACACGGCCGCCTTCAGCCCGCCCCAGAC 2750 30 96.7 31 .............................C CGCCCGCACCACTGACGTGCGACGAGTGCGG 2689 30 100.0 31 .............................. CGCGCGGGTCCAACGTCCAGGTCGTCCTCAC 2628 30 96.7 31 .............................T CCACCACGCGCTCCAGGAAGCTGGTCCCCTC 2567 30 96.7 31 ............................T. GGTGTTCGTCGGCATCCCGGTGCTCGTCGTC 2506 30 96.7 31 .............................C TCGGCAAGTCCGGCGCCGACGCCCTCTACGA 2445 30 96.7 31 .............................C GCAGCGTCGGGTGCTGCCGCTTCATCAGGAC 2384 30 96.7 31 .............................C AAGCGCGGTGTACACGATGTGGGGGTGGATC 2323 30 100.0 31 .............................. TCCGCGCGGACCCGGGCGTCGGTGTCGACGC 2262 30 96.7 31 .............................C AGTTCGGCAGCCTCCTCGGCGACATCTTCGG 2201 30 96.7 31 .............................T GTGACGCCTGCCCCATCGCCAACGCGACGCC 2140 30 93.3 31 ............................TT CTTCGCCCCGGCCGTCCCCGCCGCCGCCTTC 2079 30 100.0 31 .............................. CCCGCACCTGCAGACGTACGTCCAGTCCAAC 2018 30 96.7 31 .............................T CCTGGGACGCCCTCAAGGTCCCGAACGTCTG 1957 30 100.0 31 .............................. TGGGGGAGGCTGCGGAGGCGCAGACCACGTT 1896 30 96.7 31 .............................T ACGCGTGGGGCGGCATCCTGGTGCGCACCTC 1835 30 100.0 31 .............................. CTGCCATCGAGTCATCCCCTGCGACCCCGGG 1774 30 96.7 31 ..T........................... TTTCGTACCCGAGGGCCGGGCCGATGATGGT 1713 30 100.0 31 .............................. ACATGATCGCAGCCCGATTCCTGCGGCAGGA 1652 30 96.7 31 .............................T CCACGGACGGCAACTGATCCCCGGCATGAAC 1591 30 100.0 31 .............................. TCAACCGCGCGTTCGGCCGCAGCCGGCTGGT 1530 30 96.7 31 .............................C CTGACCGGCTGGCGTTCCAGGCGACGTCGAC 1469 30 96.7 31 .............................T ACGCCATCGCCTGGCGTAACGCGCTCCTCAC 1408 30 96.7 31 .............................A CCGTCACGTTCGACACGCGGGTCGGGTTGTA 1347 30 93.3 31 ............T..A.............. ACATCCACGGCAACCCGCTGAAGCTGACCCG 1286 30 96.7 31 .............................A AAACCGGGCGCGCCGTGCAACCTGACGGCCC 1225 30 96.7 31 .............................A TCAGCAGCATCGCCAAGGCCATCGTGGCGGG 1164 30 100.0 31 .............................. AGCCGGAGGCCCGGCAGACCGCCGTCGCCGA 1103 30 96.7 33 .............................T CCGCCCGAAGAAGGACCGCAGTACCGCCCCGTA 1040 30 100.0 31 .............................. CCCTCAACAGGCCGTCAACCGAGCACGCCAA 979 30 96.7 31 .............................A CGGACAAGGGCATCACCGTCCTTTTCACCTC 918 30 100.0 31 .............................. AGACCCTTGCGAAGACCAGGCGTGCCAGTGC 857 30 96.7 31 .............................T CGCGGTGCCGCCACAGCGACGGTCGGGCGCC 796 30 93.3 31 ............T................C TGATGCTCGACATCGCGAAGGGCATGCAGGC 735 30 100.0 31 .............................. CCGAGAACGAGCGGCTGAAGGCGGCGAAGCC 674 30 100.0 31 .............................. CCATGGAGTAGCCCTGCTTGAAGGCGTCGTA 613 30 96.7 31 .............................T CGGACACCGAGGTCAGCGCGTGGCTGCTGTC 552 30 96.7 31 .............................C CACCGGGGACGTAGCCGACGTCCGCCGCCCC 491 30 93.3 31 ............T................T CGGAGCTGGCCAGGGAGCTGACCACCCGGGT 430 30 93.3 31 ..........T..................C TTCCAGGTCAGCGGGAACTGGCCAAGGCTGA 369 30 90.0 31 ...........A.......T.........A AGCCGGAGACCGAGCAGCAGGACCAGCCTCA 308 30 93.3 32 .............C...............T ACTGGATCTTCCCCGTCCGTGACGAGCACGGG 246 30 93.3 31 ......C......................C CATGGTGATCTACCACAGCGAACTTGCGGGC 185 30 100.0 31 .............................. TCCGCCTCGACGGTCTGCACCGGGCGAAGAT 124 30 93.3 31 ...T.........................T ACCCGGTTCAGTGAAGGTCAGCTGGGGCCGT 63 30 93.3 0 ......................C......A | ========== ====== ====== ====== ============================== ================================= ================== 60 30 96.9 31 GTGCTCTCCGCGCGAGCGGAGGTGAACCGG # Left flank : TCGTTCCGTACGGCCGCGAACGCCTCCGGAACCTGGGCCTGAAACGGAGGAGTGATCTTCCCCAGATCGTGCAACCCCGCCCAGAACGCCAGCACCCGCCGAGCCTCGGCCACCGTCAGCCCCAGCGCCCGTGCGACCTTCTCACGCATTTGATCACTCAGCAGCACATCCCACAGGGCACCGAACACTCCCGCGGTGTCCAGCAGATGGCAGAGCACTGGGTACGGGCGCGGAAGACCATGCTCCTTGCCCCAAAACCGGGTGTCGACCGGGACATGTCCCGGCGAGACGGACTCACGCTTCATCATGACAGCCATGCATAACAGCCCCCACTGACAACGCATCCTCACCTGCACGGATACCAGAACAGATCCCAAGCAGGGCCGTAGAATCCAAGCCGTGGAACCTCAGCCGACGCGCGGGCAGACCAATTCAAGGCGAGTCCATTCGGATACCGTAAAGAACTCGCAAAGCACCTGAAGGAGGCCAGGTCAGGAAGG # Right flank : ACGAAGACGCTTGTCGGCGACGCTTGAAATGTGG # Questionable array : NO Score: 5.44 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.33, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTCCGCGCGAGCGGAGGTGAACCGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCTCCGCGCGAGCGGAGGTGAACCGG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.10,-11.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [25.0-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 13361-15768 **** Predicted by CRISPRDetect 2.4 *** >NZ_KQ948608.1 Streptomyces avermitilis strain DSM 46492 PRJNA299228_s028, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 13361 29 100.0 32 ............................. CGGCGGCAGCAGCAGCCGAGCGGGCCGTGAGC 13422 29 100.0 32 ............................. CGGTCCGTAACTGGCAGAAGCGTTGCTCGGTG 13483 29 100.0 32 ............................. CCTGTACTACGCAGGCTGGAATGCGGGCATCG 13544 29 100.0 32 ............................. GAGCTCCCGTGAATGCTACCGCTTTAGCACCT 13605 29 100.0 32 ............................. CGGACACCACCAACGTCCACGGCATCGCGAAC 13666 29 100.0 32 ............................. ACGGCCATCACCCTGATCTGGGTCACCGTCTC 13727 29 100.0 32 ............................. CTGAACATCTCCAACTGGCAGTCGCAGATCGA 13788 29 100.0 32 ............................. CTGGGCGATCTGCTGCTCTAGGTCCGGTACAG 13849 29 100.0 32 ............................. GTCCACCGGCAGGACCGTGCACGGGATGGATG 13910 29 100.0 32 ............................. TCGCTGCCCGCGTTGAGCTCGGCCGTCGTCGG 13971 29 100.0 32 ............................. CCACCGAAGCCCTTGGCGCTGGCCAGCTTGGC 14032 29 100.0 32 ............................. GCTTCGGCGTCGACACCTACCGCCTGTCGACC 14093 29 100.0 32 ............................. GCTTCAGGTCTCGGCCAGACCACACTGTCGGT 14154 29 100.0 32 ............................. CACTGTCCGAGCCCCTCGCGAGCTGAAGCGGG 14215 29 100.0 32 ............................. TCGTCACGGACCTTCTTTGCGTGGCGGCTGGC 14276 29 100.0 32 ............................. TCGATGAAATTGGTTCCGCCCGTTACCGAGAC 14337 29 100.0 32 ............................. GTCGACCCGCGAGGCTTCGGCATGGACTGGCT 14398 29 100.0 32 ............................. TCCCCGTTCTTGTCTAGCCAGCCCTCACTGTC 14459 29 100.0 32 ............................. ATCTGCGAGCCCTCGACGGAGCAGCGGCCCAT 14520 29 100.0 32 ............................. GTCGACCCGCGAGGCTTCGGCATGGACTGGCT 14581 29 100.0 32 ............................. TTGGCGGGCGGCTTCGGTGCGGAGGTCTTCGT 14642 29 100.0 32 ............................. CTCGCAGCTACACGGCGGGGCCCGAAACGGGA 14703 29 100.0 32 ............................. TCGAGGGCGGCCATGCGCTGGAGGTGCCAGGG 14764 29 100.0 32 ............................. TTCGGGTTCCGGCCGAGGCTCTGGTGCCAGTA 14825 29 100.0 32 ............................. ACGCACCAGCTTCTCGTGCGGCCGGACACCCC 14886 29 100.0 32 ............................. TGCAGGACGGCTTGCTCGACGAGGAAGCGGTC 14947 29 100.0 32 ............................. TGGGGCTCCGTCTCCAGGGACGACAACGGCCA 15008 29 100.0 32 ............................. CTCGCCGACGGCTTCGAGGTCTCGGTGCCGCA 15069 29 100.0 32 ............................. CCGGCGCGCTGGCGTTCCTGCAAGACGAGAAG 15130 29 100.0 32 ............................. ACGGAGCTGCGGGCAGAGCTGACAGCGACGAA 15191 29 100.0 32 ............................. TGGGTGATGCTCTCGTCGATGCCGAGGATGAG 15252 29 100.0 32 ............................. CCGTTCCCCTGGATCCAGCGCGGTGAGGTCCA 15313 29 100.0 32 ............................. ACGGTCGGCCAGCAGTTGCGGCGCGACCCGTT 15374 29 100.0 32 ............................. CCGAGGAAGCCGAAGGCGCCGACTTCGCCATG 15435 29 96.6 32 ..G.......................... GCCGTCACCACCACGAACCGGAAGCTCACTTC 15496 29 96.6 32 ..G.......................... TAGTCCCGCCTCCAGGCCCCGCCCTGAGCCGC 15557 29 93.1 32 ..G..............A........... TAGTGCGTGCCAGTCGACACCGAACTCAGGGT 15618 29 93.1 32 ..G......................A... CGCCGCGCCGTGGCTTCTTCGTTCGGCCGGCC 15679 29 86.2 32 ..G..........A......A..T..... TGCTTCCCGATCAGCGAGGGCGGGAAGCGGGC 15740 29 86.2 0 ..G................G...A.T... | ========== ====== ====== ====== ============================= ================================ ================== 40 29 98.8 32 GTTCTCTCCGCGCGAGCGGAGGTGGGTCG # Left flank : CCCGCGCATCGTCGGCGACATCCAGGAGCTCCTCGGCCTCGGCTCCGCCTACGACATCCCCGATCCGGAAGAACAGCTCGTCGATCTATGGGACCCCATTTCCGGACCAGTCCCCGGTGGCATGAACCACGGGACGGATACATGACCACACAGAAGAGGGAACACACTCAGTGGCCTCAATGATCGTGCTCTCCGCCACCGCCGTCCCCGACCACCTCCGCGGAGCACTCACACGCTGGTTGTTGGAAGCCACCCCAGAGCTGTACATCGGAACCGTGTCCGCCCGTGTCCGCGACGAATTATGGACTGCGGTCGCCGCATGCACTGGTGACGGCATGTCGGTCCTTGCCTACCCCAGCGACAACGAGCAAGGCTTCGAGCTCCGCACTGCAGGATCCCGCCGCCGCCACCCCGTCGAATTCGACGGCCTCACCCTGATCGCCTTCAATCGAGAAGATAAAGAAAAGGCAAACCCCCTGTAGAAACGCAGGTCAGGAAGG # Right flank : GATGGCCAAGGGCGCCGAAGAGATCCGCGGCAAGTCGTCCCCGCGCCCACAGGGGCAGCTCCGCCAGGGACGCCATCGGCCGGGCTGGCAGTCCTCATGCCGCTGCCTGGCGGTGTCCTCCACTCGAAGGTCATGCGCTCATCTGCCCAAGTTGCAAGGCAGTTGATGCCTCTAGTGGCGTCGGACATCGACGTAGCGACCTCGCTTACGCCGCGTCAACCGACACCCCGCCTGCGGCCGGCCGCAGGCGGACAGCGTGCAGTTCGCCCAAGCGCCAGCGAAGGAGGAACTCGACGGTACGGCGGCCCGCCGCGTCTGCAGCCTCTTCCGCACCGCGGCCGCGGTGCCGCAGGCACGCCTCATACGCGGCGTCGGCCTCGACCACCACATCCTCCGCCCCCAGCAGCCGGCGCAGCGCCGCCGCGCGCCGTTCGTCCCGGATCTGTTGCGCCACCTGCGGCGCGTAGAACGCGACCAGAGCCGGATCGGCGTCCGGACCG # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTCTCCGCGCGAGCGGAGGTGGGTCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCTCCGCGCGAGCGGAGGTGGGTCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.70,-10.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [51.7-28.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 10791-10456 **** Predicted by CRISPRDetect 2.4 *** >NZ_KQ948615.1 Streptomyces avermitilis strain DSM 46492 PRJNA299228_s035, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 10790 30 100.0 31 .............................. ACGCCGACCGAACCGTCATGCTGACCGTGGA 10729 30 100.0 31 .............................. CCACCGTGGATATCAAGCTGGCCGAGCGGAA 10668 30 96.7 31 .............................T GGCGCCAGCCGATGGCCGTGCGCTCACCGTC 10607 30 100.0 31 .............................. ACGGGGACACGCTTCGCGTGATGCTGGACCA 10546 30 100.0 31 .............................. CGGACAACGAGGTGCGGGACGGGATCCGGTC 10485 30 93.3 0 .....................A.......A | ========== ====== ====== ====== ============================== =============================== ================== 6 30 98.3 31 GTGCTCTCCGCGCGAGCGGAGGTGAACCGG # Left flank : CCACTTTTCAGCCGTCGCCGACAGACGCTGGCACTCGGGACTGAGACGG # Right flank : CCGGCCAGGAAGCAGAGGGTGATGACATTCGGTTCGGTCCTCGCCACCATGGCCGTGCTCGCGGTGGCCGCCGCACCGAACCTGTACGCGACCAGCACAACGAGCCACGCCGCCTTGGCCCAGGCGTAGGGCGTCTCGAAGACGACCATGGGCCGCGCGATCCGGCGCGAGAACTGGAAGCACGTGGACTGATCCGCTCATGGCCAAGTCGTCTTTCGTGGGCGCTGGTAGTCCACGGAGTACACCCGGGACGGACGCGAGAGCCGGCCTGGGTTGACGGTGGTCAGGAACAGGTCGGCCAGGGGCAGGCCGGTGAGGCCGGAGCTGTAGAGCAGGGTTGGGTCCGGCATCTCCATCTCGACGCCCTGAGGTCGGACGGCACCTGCGGGAACTGCGCGAGGACGTGCGCCGGGCGGGCGGGGCGCGTGCGGCGGCCGACGCGGTGGAGCGTCTGCTGACGCGCCGGCAGGCCGGGGAGGCTCAGCCGCTGGGCGGAGTCC # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTCCGCGCGAGCGGAGGTGAACCGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCTCCGCGCGAGCGGAGGTGAACCGG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.10,-11.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [35.0-28.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //