Array 1 31386-28473 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABACK010000004.1 Acinetobacter baumannii strain Ab376 NODE_4_length_198503_cov_54.604463, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 31385 30 93.3 30 ............................AG TCGGCACAGGTAGCAGTTGAGCAGTCATCG 31325 30 93.3 30 ............................GA GTTCTTTCATAACGTAGGCTTTAATGCCTG 31265 30 93.3 30 ............................AA CGTTTCCGCAAATCTGCGAAATACTCGTTG 31205 30 93.3 30 ............................AA TATAGTGGCATCTTCGAGAGTTAAAGGCGG 31145 30 96.7 30 ............................A. CAGAATTTTGTTTACAAGTTCTAAGCGGGA 31085 30 93.3 30 ............................AG TTTGAACATCTAATAATTGAGCTGTAATAC 31025 30 93.3 30 ............................GC CTCCAATTGATCCAATTGATCAACCTCCAT 30965 30 96.7 30 ............................A. ATGGTGGTTGTTATAAACCGCCTAATGATA 30905 30 96.7 30 ............................A. TAGAAGACGTGGACTCCCCCAACCTTTCAA 30845 30 100.0 30 .............................. TGCGCTCTTGCGGTTATTATCAAAGACCTC 30785 30 93.3 30 ............................AG CATGTGCTAAATCAGGGAAAAGAAAAGCCA 30725 30 96.7 30 .............................A ATTATAATCGCAATAGCTTCAATACTCCTA 30665 30 93.3 30 ............................AG TGCGTGAACATTATTCTTTCTGCATCAGCT 30605 30 93.3 30 ............................CG GTACGTTCAACGGTCAGCAGATTTGTGTTA 30545 30 96.7 30 ............................A. TAATAGTAATCGTAGTGGCGGTGTGTCAAT 30485 30 100.0 30 .............................. AACTTGCTTACGGCCAACACCTGTAATCAA 30425 30 93.3 30 ............................AG CCAACTTAATAGTAGAAAGGTAATGCCCTT 30365 30 96.7 30 .............................A CCAAACCAATCAGCAATGGAAAAACCACCG 30305 30 96.7 30 .............................A TAAAACGCGCAAAAAAATATAAGGGACGTA 30245 30 100.0 30 .............................. AAACTGATTTACAAGCTTGATCAGTAGGCC 30185 30 96.7 30 ............................A. CATGAAGCTTATTAAATGACTGACATGGCT 30125 30 93.3 30 ............................AA AGATTCTAGCCCCCTCAATTGAGAAGTTAT 30065 30 96.7 30 .............................A TTTAGAAAGCTTGGAAAATAAAGGTGACTG 30005 30 100.0 31 .............................. TGCCGATGCGTGCAAACATTTGCTCCGCTTC 29944 30 100.0 30 .............................. ATAGATGGCTTTAACTGACTCCCAGCCCAT 29884 30 96.7 30 .............................A TAAGAAAAATGCAAAAAAGGCATTTATTAG 29824 30 96.7 30 ............................A. ACACATGTTTTTCTAATAAGAATAAGACAA 29764 30 100.0 31 .............................. ACCAGATAGCAACTCTCTAGGTCAGATAGAC 29703 30 93.3 30 ............................CC AGACTTGATTTTTATCACCATTGAAGAGTT 29643 30 96.7 30 .............................C AGGTAATAAAAAACCGCCCGAAGGCGGTAT 29583 30 96.7 30 .............................C AAAACGTATGGGTTATTGATGCTCAAGATT 29523 30 96.7 30 .............................C GTTGCTACGCGCCACGGCGCACCCATCGTT 29463 30 100.0 30 .............................. GAATCGGCCGCTTTGCGTATAAACACCACC 29403 30 96.7 30 .............................A AAATCACATCAGGGAAGTGAAGGCGAGCTA 29343 30 93.3 30 ............................GA GAATGATTTAAATTGCATTAAGCCTTTAAA 29283 30 96.7 30 .............................G GAAGTCATGAATGTAGGTGTTGAGGATGGC 29223 30 93.3 30 ............................AA TAGAATTAAAACCACGTTGATAATATAGGT 29163 30 93.3 30 ............................GA ATTGCACTTGCTAAGCCAATAATGCCAACT 29103 30 93.3 30 ............................GA CCCATAAATCAAACAAGCCAACATAATTGA 29043 30 100.0 30 .............................. CCTCAACTGACATTTCCAAATAGTAGAGGC 28983 30 96.7 30 ............................A. AAAGCGCACAACCCATTGATTTGTATTTTT 28923 30 93.3 30 ............................AG CAAATAGATCAACTGGTGCGCCCTGTGAAT 28863 30 93.3 30 ............................GA GATTCAAGTTTCACCGGATGGCACAAGTAA 28803 30 96.7 31 ............................G. AAAAAAGAGCATTTCCAGCAAAAATTGACGA 28742 30 100.0 30 .............................. TAAAGCTAAATGAGGGTTAAACCTAAGAAA 28682 30 90.0 30 .......T....................AA CGTGAACAATTGTTTTAGCTTTGAACATTA 28622 30 90.0 30 .............C...T..........G. TACTGGGTTGCGGAATATATTCGCAATTAT 28562 30 86.7 30 A......A.........T..........A. TTTGATCTTTACTTATTCTCGCTTCAAACA 28502 30 73.3 0 .......A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 49 30 95.1 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCCTAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : AAGATAAACAATAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTAAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGTAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAGCCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGCCAAAGTGACGGTGAAATTACCGATGCAAAATCGCAGTTACCAGAAGGTGTCATTATTGGCCGTACTTGCTTAAACTCTTTAGAGCTTGCTCAAAAAGCAATTGCCGATGGCGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAACC # Questionable array : NO Score: 5.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.23, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [14-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //