Array 1 65574-64020 **** Predicted by CRISPRDetect 2.4 *** >NZ_PQRS01000020.1 Escherichia coli strain EP356 Scaffold19_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 65573 29 100.0 32 ............................. CGTCCAGTGATAGAACTCGACGACGGAACAAC 65512 29 100.0 32 ............................. ATTTTTTCCGTTAGTTAGTGAGCGTGATAACA 65451 29 100.0 32 ............................. AGGGTTACAGAAAAGAAGCATCGCAACTTGAT 65390 29 100.0 32 ............................. CACAAGAAAAAGATATCGCAGCGTCATTTATG 65329 29 100.0 32 ............................. GTCGCTTTTGGCGGCGTGGGCTAATGCTGGTT 65268 29 100.0 33 ............................. TTTTCGGGACGCACTGCAACCTACCAGGACCGC 65206 29 96.6 32 ............................T GTTTCGCCGCAAATACTACCGCAACGGCGCGC 65145 29 100.0 32 ............................. GCGTGGGCGAAATTGCGCAAAATACCGCTGGG 65084 29 100.0 32 ............................. GGCGATACGCCGCGCGATCGCATCCTCAATAT 65023 29 100.0 32 ............................. CGAACAGAAAAACCGTTCTCAGCCAGCGTCAG 64962 29 96.6 32 ....................A........ CAAACGATGAGCGGGCCAACGAATCGCCGTTG 64901 29 100.0 32 ............................. ATCCACGGTTCGACGCCGATCGCCGTGGCTAT 64840 29 100.0 32 ............................. CCGCCGTCGAGTGTAATACCCTGATCCATCGC 64779 29 100.0 32 ............................. CAGGATTGAAATACAGCCTCGGCCTGGGACAG 64718 29 100.0 32 ............................. AGGCGAGGGAGATCAGAGATCAGGCTATTACA 64657 29 100.0 32 ............................. AGATCGGCGGCCAGTGGATAACCGTTATCCCC 64596 29 100.0 32 ............................. GTGTGGTAATTGGTGGTCTGGCTGGTGGTTTA 64535 29 100.0 32 ............................. AGAATCTGGACACTGCATATACCGCAATCCGT 64474 29 100.0 32 ............................. CCAGCCGTTCAGTATTGCCGGTGTCAGCAAAA 64413 29 100.0 32 ............................. CCAGCCGTTCAGTATTGCCGGTGTCAGCAAAA 64352 29 100.0 32 ............................. GAAAAGCTACTTTTGTGTTCAACTGATGCATT 64291 29 100.0 31 ............................. CCGCGCAAATCCAGCGAGCCGCCGACGCTCA 64231 29 100.0 32 ............................. TTGCAAACCGTGGCAAACGCAATTAACAAAAA 64170 29 100.0 32 ............................. AATCTATTGTGAATTTGAAATGGTCCAGCACT 64109 29 100.0 32 ............................. GGTAAAAACACGGTCTGAACCGACATTCATGT 64048 29 93.1 0 ...........AT................ | ========== ====== ====== ====== ============================= ================================= ================== 26 29 99.5 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTTGCCGCTGGTGAAATTGAACCACCACAACCCGCGCCGGATATGTTACCGCCTGCCATCCCTGAACCTGAAACGTTAGGCGATAGCGGTCATCGAGGACGCGGCGGATGAGTATGATCGTAGTTGTAACGGAAAATGTTCCTCCACGTTTACGTGGACGGCTCGCTATCTGGCTACTGGAAGTGCGTGCCGGTGTGTATGTCGGAGATACATCCAAACGTATTCGGGAGATGATCTGGCAGCAAATCTCTCAACTGGCAGGTTGCGGAAATGTAGTGATGGCTTGGGCGACCAATACCGAGTCAGGTTTTGAATTTCAGACCTGGGGTGAAAATAGACGTATTCCGGTGGATTTGGATGGGTTGCGTTTGGTTTCTTTTCTTCCTGTTGATAATCAATAAGTTATCCGTTCTTTAAAAATAAGGAAATGTTTTAATTTAGTTGGTAGATTGTTGATGCGGAATAAATTTGTTTAAAAACAGTTATGTATGCTTAGT # Right flank : GGCGCACTGGATGCGATGATGGATATCACTTAGAATTCCCCGCCCCTGCGGTAGAACTCCCAGCTCCCATTTTCAAACCCATCAAGACGCCTTCGCCAGCTCCTTCACCAACGGTAGCATTATCCGCATAACGTCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGTTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCAGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTCCCAAGATTCCAATTTGTTGCTTCTACCGAAAGTACGGCAATACCGGCTTTGTCGAAAACTTCGGCGTCATTACAACAGCCAGTACCCTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCAATTCCATGACTACGCGCAATTGCCAGTGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCACTGTTGAAATACAATTTATCGCCAACAA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //