Array 1 9460-5526 **** Predicted by CRISPRDetect 2.4 *** >NZ_KL370836.1 Ruminobacter sp. RM87 T489DRAFT_scaffold00019.19, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 9459 28 100.0 32 ............................ TAATGGTGGCGGTCTTGTTCAAAATAGCAACC 9399 28 100.0 32 ............................ AGAACCTTATCCCTAACTTCACGGCCAACCTT 9339 28 100.0 32 ............................ TGTTTAAAGTGACATCTTTTTCGTGAACATAT 9279 28 100.0 32 ............................ TGCTTCGCATTCTCGACGATTTCTACGCAATT 9219 28 100.0 32 ............................ CAGGACAAAATCAACTACAGCATTACCCACCT 9159 28 100.0 32 ............................ GAAGTATTCGTTTTCCCAGACAACAATTGAGC 9099 28 100.0 32 ............................ AGCATTCAACGAAGCGAACTTCGGCAGTTAGC 9039 28 100.0 32 ............................ AAGGAGAAAAAATGGCACACGTAAAACACTAC 8979 28 100.0 32 ............................ GGCTTTCAAAAGTGCACTGTATGAAAAGAGCC 8919 28 100.0 32 ............................ TTTTACAAGTTTGGATACAAGTTTCTTAGGAA 8859 28 100.0 32 ............................ AGGAGAACGAACGAGCCTGGGCACGTGTACGA 8799 28 100.0 32 ............................ TGCTTCTTCATCAGGACGGTCAAGCTGATCCT 8739 28 100.0 32 ............................ TGAAGAATCCAGCAAATACGATATCTACGCTT 8679 28 100.0 33 ............................ TTTAAACCCTCATCGTATCTTTTGAAAACGTAA 8618 28 100.0 32 ............................ GTTGGCTCCAAAGAATGGGCATCACTGTATCA 8558 28 100.0 32 ............................ TTTACCGGTAATACCTGTTCCTACACCCGCAG 8498 28 100.0 32 ............................ AAGAAAACGAACGTGCCTGGGCACGTGTACGA 8438 28 100.0 32 ............................ TAACAGACCTGAAACAGCGGAATACTTATCGA 8378 28 100.0 32 ............................ TGTAAGTGGGCGTACCCTCTCACTAGCTTTGA 8318 28 100.0 32 ............................ TCGGTGATAGTGCCTAACGTGTGCCATTTTTT 8258 28 100.0 32 ............................ AGCTCCGTCTTATTCTTCTTCAGCAAAAATAA 8198 28 100.0 32 ............................ AAAGGAGCTCAAACAGCAAGAAAAAAGCAAAA 8138 28 100.0 32 ............................ TTTATTTACCAATTATGTTGGTAAAAACCACT 8078 28 100.0 32 ............................ ATATTGCAACCTGATCCCCGCCGTGATAAATC 8018 28 100.0 32 ............................ TGTACTCATGCCTGTTATGTCAGTCTGTACGC 7958 28 100.0 32 ............................ GAGACAGCGTGAACAGCAATAGCCTTGGTGTA 7898 28 100.0 32 ............................ TTCCACGTCTTTCATCGTCTCTGCGTACTGCC 7838 28 100.0 32 ............................ GTATGTGGTGGACTGGATTTATCACGGCGGGG 7778 28 100.0 32 ............................ AACATCTCCCGCGCCATGCTTTAAACGCCACG 7718 28 100.0 32 ............................ TCCAACACCGCCGGCAGTACGCAGAGACGACG 7658 28 100.0 32 ............................ ATGATGACCAATCAGGCAATACAGCGACAAAA 7598 28 100.0 32 ............................ GTTAATCGATTCGATTGTGGTCGCTTTTTTCA 7538 28 100.0 33 ............................ ATATCAGACCTCTTACTGTCGTAAACAAGAACT 7477 28 100.0 32 ............................ AAACTTGCCGAACGTGTCGACAAGTATGTAGA 7417 28 100.0 32 ............................ TGTTATAACACCTGTACTTCCTGTACTCATGC 7357 28 100.0 32 ............................ ATCTGCAGAAAATGTTGATGATGTCGAACAAC 7297 28 100.0 32 ............................ GTTTCCGAATGATTGACGGGTGAATGTCAGTT 7237 28 100.0 32 ............................ TGCTACTGAAATCGTCTTGTATTTTTTTCCGC 7177 28 100.0 32 ............................ GACCGTATCCAGGAACTGCCGCCGGCGTATAA 7117 28 100.0 32 ............................ TCCATATATTCGACATCATAGCCGCGGAGGGC 7057 28 100.0 32 ............................ TCTACGATTTCTTCCACGGTGTTTTTTGGAAG 6997 28 100.0 32 ............................ ATCATACATATGGCATTTTTCACCGGAGAAAA 6937 28 100.0 32 ............................ CCCAGGTTGCGGACCCTGTGGAAACTGTGGAA 6877 28 100.0 33 ............................ AACGAAACATTTACCGATGCGAACGGACAGAAA 6816 28 100.0 32 ............................ TCTGGATTTATCACGCTGTTTCTGTACGTAAT 6756 28 100.0 32 ............................ ATCTTTTTCAGCTACTGATGAAAAAATGGTGT 6696 28 100.0 32 ............................ AATCCGGTCTCTCTTAAAATAAGTTCAGGATA 6636 28 100.0 32 ............................ AAGAAAACGAACGTGCCTGGGCACTTGTGAAA 6576 28 100.0 32 ............................ ATTAAGAACACCGGTATCATAACCAACGGCAG 6516 28 100.0 32 ............................ AACTACCACTGGTGCTTAAGGTTACTTAGCGT 6456 28 100.0 32 ............................ ATCAATCTCGTATGTACGAGTCACGCTATCTA 6396 28 100.0 32 ............................ GAACCGTGGTCAAATCAGCCAATGCAAATGCT 6336 28 100.0 32 ............................ ATTTGCCGTCATTACAGTTGACACAAATTGAC 6276 28 100.0 32 ............................ ATAAGAAGATGCCAAAAGGCCCAGTTGTATAT 6216 28 100.0 32 ............................ ACATTCTCAGAAGTGCCACGGATAAGTGATAG 6156 28 100.0 32 ............................ TTAAAGGCTACGAACCCGCCGCAGAGACACCT 6096 28 100.0 32 ............................ TGTTTAGTAATCTCTGGATCTCTGATTAGAGT 6036 28 100.0 32 ............................ GGTACTGCTGTCCTACACGGTCGTAACTTTCT 5976 28 100.0 32 ............................ TTATCCGTTGCCGCATCTGTGGTTGTGGCAGC 5916 28 100.0 32 ............................ TTTTAAATAATAAATCCCGCCCGCGGTGGCAT 5856 28 100.0 32 ............................ GTAAAGACTTATAAGCACAGATTATTGATGAT 5796 28 100.0 32 ............................ GTATTTCATCTTGGCTGCATACTGCATAAGCA 5736 28 100.0 33 ............................ GGCATCATTAGGCGGTGTACTTTCTGCTGTTCT 5675 28 100.0 32 ............................ TTGAGTTATCTCTTTTTTTATTTATAGAGCAT 5615 28 100.0 32 ............................ TGCTGATGGCATTGCCACATGGCCTCGGCACA 5555 28 92.9 0 ......................G..T.. | C,G [5530,5532] ========== ====== ====== ====== ============================ ================================= ================== 66 28 99.9 32 GTTAACTGCCGTATAGGTAGCTTAGAAA # Left flank : TCTCTATGGAAGTGTTGCTCTAGTCCCCGAATTTGTAAATGAATTTGTTCAGTATCGTCGGGTTCAGTGTAAGTTTAATAAGGAGAAATTGATTCGACGATATGCAAAGCGACATAACGAAGATTTGAATTTTGTAAGAATTCGTTATAAAGATTTGCAAAGTAAGAATCTATCCCTACCTTATGTTAATTTAAGTAGCTCAACTAGTGGAGAACATTTTAGGTTATACATAGATCAGATTGAAAATATGGAATATATTCCTCCTGTTTTTAATAGTTATGGATTGATATCTAGTGGTGCTTTACCTAAATTTTAATTTCTAGTTTGTGGGTCCTTATACAATATGGGGCCCTTTTCTTTTTTAGTTTGATATTAATTTTTATATTGTTTCGTATGCTCTGAAATATCATTGCATACGAAATTTAATATTATTTTTTATTTTTTTCTAAATTTATTCATATAGTATAATAGAATCAATGATATCGGAAATCCAATTCATT # Right flank : TGTGATTTAGTAGGCCAGCTTTAACCAAAATACTTTACCATCGTTAACCTAATAGTTTACCCCCTCTAACTTAATTATCAGGCCATTTATAATTTTTTCAGGCAGATTTGTTTACCACGATTAATCTAATTAACAGTCCATTGTTAACTTTTTTACTTTACCACGCTTAACCTTAATATGTTACCACTGAAGGACAACCGGCATAATTGCCGATTATCCTATTCGTCAGTTACTTAAGAGATTTAGGAGGAAACAGTTCCATACTCTGGTCACTTATAAGATCTGTTATGAAACGACTCTTGTCAAGCAGTAATTTAGGCAAGACATTTTCCTCAGTGTAAGCACGGCATTGGCCACTCTGTTATACGGGGATTGGTTACCTCAGGTCAATGGTTCGCCGCGAATTCTATTGGTCTTTCATCGAGGATCACCGTTTACAGTGCCATCAAAGATCTTACAGCGTAACGGCTGACAAGAAGAGCTTCACCACCTTACCATAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAACTGCCGTATAGGTAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.71%AT] # Reference repeat match prediction: R [matched GTTCACTGCCGTATAGGTAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-1.80,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [66.7-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //