Array 1 1413-1205 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAZRT010000004.1 Acinetobacter indicus strain AI22 NODE_4_length_257638_cov_177.674361, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1412 27 78.6 32 A.A...C-....AC.............. ATTCCGCTCTGCTGGCTGGAAATACCTGTCTA G [1409] 1352 28 96.4 32 ............A............... ATTCGCCAAAGCAATCAGCGCCTCTTCACCAC 1292 28 100.0 32 ............................ ATTCACCAGAATTTTCAGTATGACAGGACCAG 1232 28 96.4 0 ........................A... | ========== ====== ====== ====== ============================ ================================ ================== 4 28 92.8 32 GTTCACTGCCATGTAGGCAGCTTAGAAA # Left flank : GTGGACACCTATTTATGGATTTAAAGATAGTTATAGACAGCACACCAACGCTAAAAAAGCCCCGTCGAACCTTCACTGCTGAATTTAAACATCAACTTATTCAGCAATGCCAGCAGCCAGATACATCGGTGGCTAAGGTCGCAATGCAACATCAGATCAATGCCAATCTGTTGCATAAATGGATTCGTCAGTCCAGATCAATGGTTCCATCATTAACAACCCCATCTTGTCCACAGACCGACTTCCTTCCCGTCATTCTTCACCCGACGCCAGTCAAACAAGAAGCACCTCCGCCACCTGTGCCAGTGAGGAAAGCTACAGCTCATATCAGGATTCCATTACATGATGAACAATGTTCCGTAAGGGATCAGATGATCGAAATCGAATGACCGGTGGAGTCTGCAACTGAATTACTGCTTTTACTTCAGGGCTTGATCAAATGATCCGTATCGATGAAATCTGGTTGTCTACCCAGCCCATGGACATGCGTGCGGGTATGG # Right flank : CACCCAAAATAAAACCGGAGCATCGCCCCGGTTTTATTCTTCATCTATTTATTCTTCTAACAGGCTTCTTAACATCCAGGCAGTTTTTTCATGGACTTCCAATCGTTGGGTCAGTACATCCGCAGTTGGCTGGTCATTGGCTTCTTCCACCACATCAAAAATACTGCGTGCGGTACGGGCAACTGTTTCATGGGCACGAACCAATAACTCCACCATTTCATTGGCTTTTGGTACACCTTCGACTTCTTCAATCGACGCCAGTTTTACAAATTCTTTATAGGTTCCCGGCGCCGGAAAACCCAGCGCACGAATCCGCTCGGCAATAACATCCAGTGCATTCCATTGCTCGGTATATTGCGTCATAAACATGGTGTGCAGGCTGTTAAACTGTGGCCCGGTCACGTTCCAGTGGAAATTATGGGTCATTAAATATAGGGTATAACTGTCGGCCAGAAGTCGGGAAAGCCCTTCGACAATTTTGGCCCGGTTATCTTCAGAAA # Questionable array : NO Score: 5.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.64, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCATGTAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCATGTAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.40,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [1.05,4.5 Confidence: MEDIUM] # Array family : I-F [Matched known repeat from this family], //