Array 1 385040-383155 **** Predicted by CRISPRDetect 2.4 *** >NZ_LAWN01000002.1 Streptococcus gordonii strain PK488 Contig2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 385039 36 100.0 30 .................................... AAGCTGTCAGGATTGCTGCTTGCTTCTTCT 384973 36 100.0 30 .................................... TTAAAACTCCGCTACTGTCTTTGACAATCC 384907 36 100.0 30 .................................... AATTCAGCGCCAGTAGCGCGAAGACCGCGT 384841 36 100.0 31 .................................... TACCTTTCTCAATATATAAGACATTACCTTT 384774 36 100.0 30 .................................... GTTGAAATCTTCAACAATTGATCCATTTAT 384708 36 100.0 30 .................................... TATCGGATTTGTGGTTGCTGAGCACGCAGA 384642 36 100.0 30 .................................... ACAAGTAAATTTCTTGCGGTTTCATACGTT 384576 36 100.0 30 .................................... GGATATACGAAACGTAACACAGTCACCAGA 384510 36 100.0 30 .................................... ATTAAGTATGGCTAAACAGTATGAAATTGA 384444 36 100.0 30 .................................... ACAGAAAAAGAAAAACTATGATATAGATGA 384378 36 100.0 30 .................................... TATGAGCGAAATTGCTTCAGACCTTTATAA 384312 36 100.0 30 .................................... TTCTGATCATGGTAGCTGGCATGCTGTTCC 384246 36 100.0 30 .................................... AAATGATGAAAGCAGGCTTGATTCTCTAAA 384180 36 100.0 30 .................................... ACAAGCGACTATGTAAAAGGACGCTATGAG 384114 36 100.0 30 .................................... GCTGATTACTGGGAAATGATTGTAGCACAC 384048 36 100.0 30 .................................... ATTGCGTCTCCGATTGTTGCAAAGTTCAAG 383982 36 100.0 30 .................................... TTACTGACTAAACTATACCAATTTCCAGAA 383916 36 100.0 30 .................................... ATTGCTTTCTCGTCCTTGTGCTAAGGACGT 383850 36 100.0 30 .................................... ACAGGCGAAATCGTGGCAGTCTATCAGCCG 383784 36 100.0 30 .................................... TTGCTCTGATTGCCTAACTCCCCTTGTGGA 383718 36 100.0 30 .................................... ACTTTTGTCGTATTACGTAACAAAAAAACA 383652 36 100.0 30 .................................... TCCCAGAAAATAAAAAAGGACGAATCAAAG 383586 36 100.0 30 .................................... AATATTTTGCTTTACAAGACGATCCAGCCC 383520 36 100.0 30 .................................... TGTATAATCACCAACCCTGTCGTGGTAATC 383454 36 100.0 30 .................................... GTTTAACGGAGTTAGCAGTAGCACAGGGCA 383388 36 100.0 30 .................................... AAATAGGCTTCAAATCTTCACCCCCCAGTT 383322 36 100.0 30 .................................... AGCAAATCCGTTTACTATGTCAGATTATGT 383256 36 100.0 30 .................................... ATTCTTCCTGAGAGACGGAACAAGGGTAAC 383190 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 29 36 100.0 30 GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Left flank : ATCAACTCAATGACAAGCCCGAAGTTAAATCCATGATTGAAAAGCTGGTTGCTACGATTACAGAATTGCTGGCATTTGAGTGCTTAGAAAATGAACTAGACCTAGAATACGATGAAATCACCATTCTAGAGTTAATCGATGCGTTAGGAGTCAAAGTTGAAACTCTGAGCGATACACCTTTTGAAAAGATGCTAGAAATTGTCCAGGTTTTTAAATATCTTTCTAAAAAGAAACTTCTTGTTTTCATCAATGTATCCGCCTATCTATCAAAGGATGAGTTAGTAAATTTGATCGAGTATATCCAACTCAATCAACTAAGAGTCTTATTTGTCGAACCTCGAAAAGTCTATGATTTCCCTCAGTATGTGCTGGATCAAGACTATTTCTTGAACCCTGAAAATATGGTATAATAAGAGTAACAATTGGAACCTGACGAGCTGAAGTCTGGCTGAGACGAATGGCGAGATTACGAAATTTCGTGAGAAAAATTTTTCTACGAG # Right flank : AATATTAAGATTTAATTCAATTCAACCATACTAGCTAGAGGTTGGTGGGGAGTCCAAATGAGAAAGCAGATAGAAAAGTTATTAAACAGCGATATAAGCACAAGCGCAATCGCTAAAGGAGTAGGCGTTCCTTGGTCTACAGTAGCGGACCTTAGAAAAGGGAAAACCAGTATCGATAAAATGGCCTTGCTTACAGCCGAGAAATTAAATGATTTTGCGGAAGAATTAAAAGCGGAAAAGGACGATGAGCTATACAATTAATCTATCAAAATAACCACCTATTTAGGTGGTTGTTTTCATTATCTATCACTGCTTACTAGAAGAGCTTGAGCTACTTGAGCTGTCGCTGCTGGATTCAGAACTGTCTGAGGAGCTGGTGCTTTCAAACTGTTCTGGGTGGAGCGCTCGATAGCTTGGAGCATCAAAGAGATCGATGGTCGATTCGCCCTTGCGTTGGCTGTAGAGACTAGTTGATTGGTCTCCTTTTTCTTCCTCGATTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [65.0-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //