Array 1 90793-92930 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP064005.1 Xanthomonas translucens pv. translucens strain XtKm7 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ======================================== ================== 90793 31 100.0 35 ............................... AACTTCGCCGCCGGTCTGTGTGCCGGGGTGCTGGG 90859 31 100.0 34 ............................... AGCTTTCAAAGAGCTTACGGTGCCGGCGTCGCCA 90924 31 100.0 36 ............................... AGCCCTTGGTGCGCCTATTCCCCAAGGCCCAAGAGG 90991 31 100.0 34 ............................... TTGAACGCAACGATCTGCCCGTTGCGAAGCACGT 91056 31 100.0 35 ............................... TGACAAGTCTGCCTGCTCAAGTTCGTCCCGACCCA 91122 31 100.0 35 ............................... CCCTACTTGAGCATCTTATCGGCAAGTTGGCCGAC 91188 31 100.0 36 ............................... TTTGCCACCGATCAGCTGGGTGTCGGGCAGCACGTC 91255 31 100.0 35 ............................... TGGCAATAGCGCGGCCCGGCCCACACGCTGGAACT 91321 31 100.0 35 ............................... GCGGCTAAGCCCGAAGGTGTCCACCTGCCGCTGCA 91387 31 100.0 35 ............................... AGGCGAAGCGTATACACGCCACCTTCCTGCCCCAG 91453 31 100.0 35 ............................... CGACAAGGCGATGGCCGGTATCTACGCCGACCGAG 91519 31 100.0 34 ............................... ATGTAGTGCGCGATGACCTTGGCGCTGGTGTTTA 91584 31 100.0 35 ............................... AGTAGTTGCGGGCGGGCGACATGCTGGCGAGCCAG 91650 31 100.0 35 ............................... CTCTAGCTCTGCCTCTCGCCGGGCGCATTCCACCG 91716 31 100.0 33 ............................... TCAAGCAGCAACGCCCTGCCGTCCGCTACCATG 91780 31 100.0 34 ............................... TGGCTCGGCTGGTATCACTACCTGGCCGCACTCG 91845 31 100.0 36 ............................... TGGGTTGTCCAGGAACATGGCGATACCGGCCAAGGG 91912 31 100.0 34 ............................... AATTGATCCATCTGGGTCTTGTACTGCTGCACTT 91977 31 100.0 34 ............................... TTTCGTCCACGATCAGAACACCGCGCCGCCGCCG 92042 31 100.0 34 ............................... ATGCCTATCAGCCAATCCGCACGGGCGCGTGCTT 92107 31 100.0 40 ............................... CCTTCCACCGGGACGGTGCCGCTCATGCGCCGGCACCAGG 92178 31 100.0 35 ............................... TCTTCCTTCCAGCGTGATGCCGGTCAAGCCGCGTC 92244 31 100.0 34 ............................... ATGGCAGCGTCTCCGGGTTGCTGTATGCGCTTTC 92309 31 100.0 35 ............................... AACTAAACAACGGATCGAGATTGCAGGAGGATACC 92375 31 100.0 34 ............................... GTGTATTGGCCTGGAACCGGGGTGGCGGTGCCGG 92440 31 100.0 34 ............................... AATAGGGTGGCCGCGGGACGCAGATTCTGCAACC 92505 31 100.0 35 ............................... AATACGCCCAGCACGGCCGCCGCTTATTTGTTTTC 92571 31 100.0 34 ............................... CGTGCTCCTGTTATCGAAGCTCGATATCACGTCC 92636 31 100.0 33 ............................... ACGGCAAGAGCTTGAAGCTGGACCGCTATTCGT 92700 31 100.0 35 ............................... CAACGTACCGCTGGCGCGCTTTTCGTCCATGAACT 92766 31 100.0 36 ............................... ACCTTGACGCCGTGGCTGGTACGCATCGAGCAGGGC 92833 31 100.0 36 ............................... TCAACATGGGCGCGCTGGTATTTACCATCGAGGCGG 92900 31 100.0 0 ............................... | ========== ====== ====== ====== =============================== ======================================== ================== 33 31 100.0 35 GTCGCGTCCTCACGGGCGCGTGGATTGAAAC # Left flank : ATGAAAAGGCCGCCGCGCCATGATGGTTCTGGTCAGCTACGATGTCAGCACGAGTTCCCCCGGCGGCGAAAAGCGACTGCGCAAAGTCGCCAAAGCCTGCCGTGATCTCGGCCAACGCGTGCAATTCTCGGTCTTCGAAATCGAGGTGGACCCTGCACAATGGGCCGCATTGCGGCAGCGCTTATGCGACCTGATCGATCCAGGCGTCGACAGCCTGCGCTTCTATCAGCTCGGCGCGAAATGGGAAGCCCGCGTGGAGCACGTCGGCGCCAAGCCCAGCCTGGACCTCAAAGGCCCACTGATCTTCTGACGCGAACCGCAAGCGACCGGGGAAAGCCGGGCAGGTTCGCGCAACAAACCAAGTCATTGATTTACAAGAAAAACACTAACCTCTTCCGCTCACTACAGGTCCGCGGCGGCCCAATTCGATTGCGTCTCCGAAGGGTTCCGCAAAAGTGCGGACTTTTTTCCAACACCCATCAGCACTTATGCTCAGGGCG # Right flank : CAAAAATGCCACCTGATTAGCACGCTACTTCAGCCCAGTCGCAGGATATGAGTGGCTGCGTCCGCACAGTGGCGTTCGGTCACATCAAGCAGGCAAGCGATCATGGCAATGAACCGTGTCCAGTTCCAGGCAGGGCTGTCGCTGCCAGGATTTTTGGCGCGTTACGGCAGTGAAGTGCAATGCGAGCAAGCGCTGGAAGCCGCCCGCTGGCCGGACGGGTTCACCTGCCCGCGCTGTGCAGCCAAACGTTGCAGCAAGTTTTACCGGTATGAACAGGCTTACTGGCAGTGTTCGCAGTGCCGCCATCAAAGCAGCCTGCGGTCGGGGACGGTGTTCGAGCACAGCCGGCTGCCCTTGAGGACCTGGCTGCTGGCGATGTATCTGCTGGGCCAGAGCAAGACCAACCTGTCGGCTTTGGAGTTGATGCGGCACCTTGGGGTGAGCTATCCGGCCGCCTGGCGGATGAAGCACAAGCTGATGCAGGCCATGGACGAACGAGA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGTCCTCACGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCGTCCTCACGGGCGCGTGGATTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.30,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [48.3-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.37,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 94034-99328 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP064005.1 Xanthomonas translucens pv. translucens strain XtKm7 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ========================================= ================== 94034 31 100.0 35 ............................... AAGTTGTCGGCCGCGCTCTTTCCATACGTGCCGTC 94100 31 100.0 38 ............................... ATTAACCCGCTCACCGTGGGCGCTGCGGCAATTGCGGG 94169 31 100.0 35 ............................... CTCCCTAGGGCCATTGCAAGCCGCGAAGTGCCGTT 94235 31 100.0 35 ............................... ACTAATCGCATCTGTTAAGTTGTCCAAAATAGTTG 94301 31 100.0 34 ............................... AAGCCCTCAGCGACCGGCGCCGCGGCGTTGGTGA 94366 31 100.0 34 ............................... CTAATAATGTCGACCGAATCCGAAATCCTCCATG 94431 31 100.0 41 ............................... ATGGACACCATTGAGTCACCTACGGGGTCGGGCGAAAGGTT 94503 31 100.0 35 ............................... ATGGACAGTCTCCGGGTTTCTGGGGTGTTGTCGCG 94569 31 100.0 35 ............................... ATGTTTTTCCCTCTGTGGGTTTCGTGGGCGCTACT 94635 31 100.0 34 ............................... ATTAAGCAGACTCTGCACATTTGCGGCAATGTCC 94700 31 100.0 36 ............................... TGTGTCGGTAGTGCAAGAATCGGCAGAGTTCTGGAC 94767 31 100.0 36 ............................... AAAGAAGACTTGCAGCTGTACCGGGACATCCGGGAG 94834 31 100.0 34 ............................... CGTGCTCCTGTTATCGAAGCTCGATATCACGTCC 94899 31 100.0 33 ............................... ACGGCAAGAGCTTGAAGCTGGACCGCTATTCGT 94963 31 100.0 35 ............................... CAACGTACCGCTGGCGCGCTTTTCGTCCATGAACT 95029 31 100.0 36 ............................... ACCTTGACGCCGTGGCTGGTACGCATCGAGCAGGGC 95096 31 100.0 36 ............................... TCAACATGGGCGCGCTGGTATTTACCATCGAGGCGG 95163 31 100.0 35 ............................... AAAAATGCCAAGACCTTGACGATTCCGCTGTATTT 95229 31 100.0 35 ............................... AAGTTGTCGGCCGCGCTCTTTCCATACGTGCCGTC 95295 31 100.0 38 ............................... ATTAACCCGCTCACCGTGGGCGCTGCGGCAATTGCGGG 95364 31 100.0 35 ............................... CTCCCTAGGGCCATTGCAAGCCGCGAAGTGCCGTT 95430 31 100.0 35 ............................... ACTAATCGCATCTGTTAAGTTGTCCAAAATAGTTG 95496 31 100.0 35 ............................... CCCACCACACTGCCCAACGACAGTGCAGAGCGTAA 95562 31 100.0 35 ............................... AATCGCTGTTGCCTGTACCGACTGTGCATTTGCTA 95628 31 100.0 34 ............................... CCTGTGTTTACCTGTTAGCTACTGCGGAGGTGTT 95693 31 100.0 36 ............................... CTCGCCAGGCCAGAGGGTGTCTAGCTGCGGGAGCCA 95760 31 100.0 34 ............................... ACTATCTTGCGGTTAATCCCGTGGCCCAGCCACC 95825 31 100.0 35 ............................... CAGTCACTGACAATGTCATCCATCGTGATGAAGTT 95891 31 100.0 35 ............................... CTCACGCCCAGCAACGCGCCCCGTGCCGTTGGCGA 95957 31 100.0 35 ............................... CTCCGTAAGGAATCCCATTTGCGTATTAAGTTCCA 96023 31 100.0 36 ............................... TCCCAGATGCCGCAGCAGACCATACCGCTGTTTGGC 96090 31 100.0 35 ............................... GTCTACGGCGACACTGCCCCGGCTGCTGCTAGCGG 96156 31 100.0 34 ............................... GCGAATCTCGAACTAGGAATGAACCTCCGAAGCG 96221 31 100.0 33 ............................... TAAACAGCATCGCCGGGGCGGCTATGGCGCAGT 96285 31 100.0 33 ............................... GCACAAAGGCCGCCCGCGACGGTGTAACTGACC 96349 31 100.0 34 ............................... CTCATGGAGAGTAAGGCGGCGCTGGATGCCTTGC 96414 31 100.0 35 ............................... TGAATGGTAACGGCACCGGCCAAAACCTGCTGGGT 96480 31 100.0 37 ............................... TAAACAGCATCGCCGGGGCGGCTATGGCGCAGTTCAC 96548 31 100.0 34 ............................... CTCCTCCGTTCCCTTCGGGTTGTATCCTTCCAGG 96613 31 100.0 29 ............................... TCCGTCATCGGAATTCCTCGTTGTGTAGA 96673 31 100.0 35 ............................... AGGCTGTGGCTAAGGCAATCGGCACGCACGTGCAG 96739 31 100.0 35 ............................... TGCCCGTAGAGCCACCGCCACTCGCGTAAGGTGCG 96805 31 100.0 36 ............................... TGGAACAGGCTGAAACACCAAACCCGCATCAGGCTG 96872 31 100.0 33 ............................... TTCCACTTGCCGTGCTCCGGGTGGGTGTCGTCC 96936 31 100.0 34 ............................... CTGGTCACTGTCGTAGTCGCTTCGTCGTACGACC 97001 31 100.0 36 ............................... CGCACGCAAACAGTGCATGTCTAGCCCTAGCCGGAG 97068 31 100.0 36 ............................... TTACGCATCGTTAGTTCCTTCTTGTGCTATGGCGTC 97135 31 100.0 34 ............................... ATACGCAGTGCCGGGTCTAGAAGGATGTCGAATC 97200 31 100.0 34 ............................... ATCCCCGCGGCGCCGGCACCGGCACAGCCCGGGA 97265 31 100.0 35 ............................... TGGAGCTGCTTGCTGGCGATCGTCATCTGCTGGGC 97331 31 100.0 35 ............................... TTGCTGTCCTTGGCGAACCGCTTGGTGCCGTCCTC 97397 31 100.0 34 ............................... TCGATCAGCCGACCATAGCGCGGCGTCTGGATCG 97462 31 100.0 35 ............................... CAAGACGCGCTCGCGCGTATCTATTTCCTGACCCG 97528 31 100.0 34 ............................... AGCCACCTTGTCCGGACTCGCCCAGATCGAGTTG 97593 31 100.0 33 ............................... CCGACGTGCGCAACGACGACGCAGTCGATGGTA 97657 31 100.0 36 ............................... GGGTTCGTGCTACCCGGCGTAGCGATCAACTGCCGG 97724 31 100.0 34 ............................... TCAGATTAGGCGCAGGATGCGCGAAACAAAGGTA 97789 31 100.0 35 ............................... AGCGTCAACGTGGCCCACGCGCGCATGCTGCGCGA 97855 31 100.0 34 ............................... TGCAGCAGCTTGAGGAGCGCTTGCAGCGGTTCGC 97920 31 100.0 33 ............................... TCGCGATTGTCACCGGTGGTGGCAAGTCGCTGG 97984 31 100.0 36 ............................... GGGTTGGTCGGAGTGGCGGTTTTGAGGGCCGGCGAG 98051 31 100.0 35 ............................... CTGGCGCAGGTCGCGCACGAGTCGGACAACTTCCG 98117 31 100.0 35 ............................... CACAATGTACTGACAGGACCGGCCGAAACACGTTT 98183 31 100.0 36 ............................... CGGTCGGTGCTGCTGCTGCTGCGATGGGGGGCGCAG 98250 31 100.0 36 ............................... GTCTCACCCGGCAACAACGGCGTCGCTGATCGCATC 98317 31 100.0 33 ............................... TTCGCCCGGGCCAAGAGCGCGGAGGCGGCCCTC 98381 31 100.0 34 ............................... GACAGCAAGCCGCCGTTCTTGCGCATGCGCCTGC 98446 31 100.0 35 ............................... GCTGCGCTGACACTGGAAGCGCGCAACGCCGAGCG 98512 31 100.0 33 ............................... ACCACGGCAAAGCCGGCGAGCCGATGACAACTG 98576 31 100.0 35 ............................... GTAATACCACACAAGTCAGCGCGGCGCCGGCAGAA 98642 31 100.0 34 ............................... TTTTGCACAGGGCGACAGCTTCCGCTTAGACATC 98707 31 100.0 35 ............................... AAGATCAACATCCCCGGTGCCAGCACAGAAGTGCG 98773 31 96.8 35 T.............................. TCTGTCGAAGGCATGCTCACGGCTGCGCTGACTTC 98839 31 100.0 34 ............................... TACAACAAGCTGCTGAATATCGCCGGCATGGGGC 98904 31 100.0 34 ............................... CCGGATGGGCGCACTTGGGGCTACGACGTGGTGA 98969 31 100.0 34 ............................... GTACGCCTGCCGGAACCTCGGAAATTCCACGCCG 99034 31 100.0 34 ............................... TGGAACAGCGAGAAGCACCACACTCGCATGAGGC 99099 31 96.8 34 ............G.................. AACCGTAGGTTGACTGGTTGGCCTGCCAAATAAA 99164 31 100.0 35 ............................... TCGACCCAGGAGCCGAACGATGCGCTCGAGAGCCG 99230 31 90.3 33 ...............T....C..G....... ATGTATTTGTTCGAAGAACATGTTCTTGCCGGT 99294 31 93.5 0 ...............C.........G..... | T,G,G,C [99298,99302,99304,99322] ========== ====== ====== ====== =============================== ========================================= ================== 81 31 99.7 35 GTCGCGTCCTCACGGGCGCGTGGATTGAAAC # Left flank : TGTCATTGCCGTGGAGACCACGCAGGACGGTCGTCCACGGCAGGCGGTGATCGATCCTGTGCCGGGCTTCACCAAGGCGGCGCTGGCCGATTGGATCGAGCGGCGGTTGCGGCCGGGGCTGACGTGTATAGCGACGGACTGGGCGCTTTCCGGGTCCTAGAGGCTGAGCATGCCCATACAGTAATCGAGGGAAGTGGCCGGAGCCGTTGCGAGGAAGCCAACGCCCGCTGGGTCAACGTGGTGCTGTCCAATCTGAAGCGGTCACTGGACGGGGCGTATCACGCCTTCAAGTTCACCAAGTATGCGCATCGCTATCTGGCCGAGACGCAATGGCGATTCAACCGGCGCTTTGATCTGGCGGCCCTGGTGCCGCGACTGCTGGTGGCCGCAGCCCGGATCAAGCCATGGCCCGAATCTCGTTTGCGCGCTGTCCCGGTCTTTTCGGCTGAAGTAGCGTGCTAGTCAGGAAATGCCAAGACCTTGACGATTCCGCTGTATTT # Right flank : CTGGCCTGGCGACGATATGTCGTTCTATCGCCTTTGCCCACAAAAAAAGGGCGCAGTCTCGCGACTGCGCCCAGCGTGCCGCGCCGGCCGGGAGAGAGTCGGCTGGCGCGATCCGTGACTGCGGTGTGCTTAGCGGGACGCGAGGCGCATCACTTGACTTCGAATTCCTGCACGGTCCCGGCCGGCTGGCCGTTCACGGTGACCTCGGCCTTGTACTTGCCAGCCGGCCAGCCCTTGGCGTTGGTGAAGGAGATATTGGTGGTTTCCGCACCGGCCGTGGTCAGCGTCGCGCTCTGCTCGCCGGCGGTCTGGCCGTCCTGGAACAGCAGCTTGGCGCCGACATTGGTGGTGGTGGAGGAACCCTCGGTTTTCACCGAGACGATGATGGTGTCCTTGCTGCTCAGCGTGCTCAGCGGCGCCACCGTCTTGTCGGCGCCCGCACTGTTGCCCACGGTCACCGAGGCGACCGTCACCGTGCCGGCAGTGGCCGCGGCCGGCGC # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGTCCTCACGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCGTCCTCACGGGCGCGTGGATTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.30,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //