Array 1 937224-939002 **** Predicted by CRISPRDetect 2.4 *** >NZ_PYXD01000001.1 Prevotella sp. oral taxon 820 strain W6195 scf7180000000006, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 937224 30 100.0 34 .............................. CTTCTTCCGTGGAGAAGAAGTGGGTGGTTTCGGC 937288 30 100.0 36 .............................. TTGGTGCAGGACGGCTGAAAGGAATGTCAGACGTGA 937354 30 100.0 35 .............................. GAGAAAGGAGGAAAATTATGAGTAACGAAAGGGCA 937419 30 100.0 34 .............................. CATTGAGCGGATTAGGCGGCATTGTAAACAGTTT 937483 30 100.0 34 .............................. CTTTTTCTTCAGGTCATTAAGCGCGTTGATCTGC 937547 30 100.0 34 .............................. GACGTCGGGGATCTTGATATCGAGGACTTTGGGC 937611 30 100.0 34 .............................. CGGGTGATGATGAGCATCTGCAGCTTCGATAATT 937675 30 100.0 34 .............................. CGTTTCTGAGTAGGGAGACTGAACAGGAAATAAA 937739 30 100.0 34 .............................. AGTCTCTAATCCTTGCACTAACACAGCGTGGAAA 937803 30 100.0 34 .............................. TTTATCGTGCTTCTTTCCGTGTCGAGACAGAACG 937867 30 100.0 34 .............................. TCGGACTTATATATCTCTACTTCATGACACCCGT 937931 30 100.0 37 .............................. ATGATATATCTGAAATGATAAAATTGGACGACAAGTT 937998 30 100.0 37 .............................. ACGATGAGAAAAATTCTCAGACGGAATGTAACAGAAT 938065 30 100.0 36 .............................. ACGATACCGCCGTTTGCGAACGCGCCGCTGATGGAG 938131 30 100.0 35 .............................. AAGTTCTCTGCCCCGATATAACGGCGCAAGTCATT 938196 30 100.0 34 .............................. ATTTTATTACCAAACAATCTGATTTTGGGAAATA 938260 30 100.0 34 .............................. TAGATAATTCCTTTCACCCCTTCTTCGATATGTC 938324 30 100.0 35 .............................. TCTGCTCGCTCGTTGCATGCGTAAGCGATGCAGGA 938389 30 100.0 36 .............................. TTTGTATTTCAACGGGAAAACCAAGAAATACATTTC 938455 30 100.0 35 .............................. ACATACAATTCCGATTAGTATTGATATTGGAATGG 938520 30 100.0 34 .............................. ATGATCGTGGCCATGGCGGCGTCGGTACCGGTGT 938584 30 100.0 35 .............................. GTTTCTCACTCTGTTCAAAGAGTGTCCGGTACTTG 938649 30 100.0 34 .............................. CGACGAATAATCTTAATTGTGCGAATTGTGTCAA 938713 30 100.0 35 .............................. GCAGTTGTGTACAGCGGGTTGTTGGCAAACTCATA 938778 30 100.0 36 .............................. ACGTAACCTATTTACCTGACCAAACAAACGGGTATT 938844 30 100.0 35 .............................. ATCATTGCGACTATCACTATACAAATATACCGAAT 938909 30 100.0 34 .............................. TTGATGCAGAAAAACGCACAATAAAAGTAGAAAA 938973 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 28 30 100.0 35 GTTTTAATCGTACCTTAGTGGAATTGAAAT # Left flank : TTTAAGATGTATTGGTAGAGATATGTATGTGATATTGATTTATGATGTGGGAGTGAAGCGTGTGGCTAAGATGCTTAAACTATGTCGACAATATTTGTGTTGGATTCAGAATTCTGTGTTTGAAGGAGAATTATCAGAGGTAAAGTTGAGAGAACTGGAATTACGGTTGAATGGCATTATAGATAAAAATGAAGATAGTGTGATAATATTTTCAAATCAAATGGGTTATCATATGAGTAAGGAGATTCTTGGGAAGGAACGGATGTCCACAGATAACTTCCTCTAAAGTTGTCGATGTCATTGTTGGCTCATGTCACGATGAAAAAAATGGGTTAAAAAGTGCATGCCGGTAATAGTGTGAGGCCTCTGTTTTAAGGAAGTTGTCGAAGTCTTAAGTAAAACATTCTTTTCAGCATCGACATATTTTTATTCGTTTTTTATATCTTTGCATAACAAAAACTATAGTGTTTATTATGTATTGTGCATATTTTCTCTATGGG # Right flank : TACATCCTGCAAGTAATATGTCAGTTCGGAATAAGTTTTTCTAAAATCAGCAGTGTGCAATGCTTGATTGCCAAGGCGGAACATGATGAATCACGCCCCTTCGACTCACGCCACGCCGCTTTCCGGTAGACGCAAATCTGTCTTTAGAGAAAAAACTTATCCCGAACCGTAATAATAATCTATTTTGCCCTATTCCTTTGCTGGATTAAGAATTTTGAAAGACCGTTTTCTGATTCTTATTTTGGCTCACTCGATAATTTGTGGGGACAAGCCTGCAAGCGATGAAGTCATATAAATCTGTCAATCGTTTATGGGAGCGGGAGAGACGCACCGATGATGATTCAGCGCTTCCGTTATTTTTGTCAGAAAAAACTACCAGATTTTAACACTTCCGCAACATGTCATTTAGCTGCCGAAATGCCGAAAAAGTCCTTCGCTTTGTCGATTTCGACACCCTTTTATGCCCAAAGCTATGCTTTTATCGGCTCAAAGCATAATTT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAATCGTACCTTAGTGGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.80,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [73.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0 Confidence: HIGH] # Array family : NA // Array 2 993129-993417 **** Predicted by CRISPRDetect 2.4 *** >NZ_PYXD01000001.1 Prevotella sp. oral taxon 820 strain W6195 scf7180000000006, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 993129 30 100.0 34 .............................. CTTCTTCCGTGGAGAAGAAGTGGGTGGTTTCGGC 993193 30 100.0 36 .............................. TTGGTGCAGGACGGCTGAAAGGAATGTCAGACGTGA 993259 30 100.0 35 .............................. GAGAAAGGAGGAAAATTATGAGTAACGAAAGGGCA 993324 30 100.0 34 .............................. CATTGAGCGGATTAGGCGGCATTGTAAACAGTTT 993388 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ==================================== ================== 5 30 100.0 35 GTTTTAATCGTACCTTAGTGGAATTGAAAT # Left flank : TTTAAGATGTATTGGTAGAGATATGTATGTGATATTGATTTATGATGTGGGAGTGAAGCGTGTGGCTAAGATGCTTAAACTATGTCGACAATATTTGTGTTGGATTCAGAATTCTGTGTTTGAAGGAGAATTATCAGAGGTAAAGTTGAGAGAACTGGAATTACGGTTGAATGGCATTATAGATAAAAATGAAGATAGTGTGATAATATTTTCAAATCAAATGGGTTATCATATGAGTAAGGAGATTCTTGGGAAGGAACGGATGTCCACAGATAACTTCCTCTAAAGTTGTCGATGTCATTGTTGGCTCATGTCACGATGAAAAAAATGGGTTAAAAAGTGCATGCCGGTAATAGTGTGAGGCCTCTGTTTTAAGGAAGTTGTCGAAGTCTTAAGTAAAACATTCTTTTCAGCATCGACATATTTTTATTCGTTTTTTATATCTTTGCATAACAAAAACTATAGTGTTTATTATGTATTGTGCATATTTTCTCTATGGG # Right flank : TACATCCTGCAAGTAATACGTCAGTTCGGAATAAGTTTTTCTAAAATCAGCAGTGTGCAATGCTTGATTGCCAAGGCGGAACCTCCCGACAAATGACGGCAAGCCTTGCCCAGCTTGGGCAAACGCCAAAGCAAAACAGATGTTAAATGCTCAACTTGAGCAAACGTCAATGCTTGATTGCCAAGGCGGAACATGATGAATCACGCCCCTTCGGCTCACGCCACGCCGCTTTCCGGTAGACGCAAATCAGTCTTTAGAGAAAAAACTTATCCCGAACCGTAATAATAATCTATTTTGCCCTATTCCTTTGCTGGATTAAGAATTTTGAAAGACCGTTTTCTGATTCTTATTTTGGCTTACTGGATAATTTGTGGGGACAAGTCCGCAAGCGATGAAGTCATATAAATCTGTCAATCGTTTATGGGAGAAAGCCGGCCGCACCGGTGATGAAGTCTCCGGCTTCATCACTTGTAAGCCCATCCAAGTCTGGCTTCATCACT # Questionable array : NO Score: 9.06 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAATCGTACCTTAGTGGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.80,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [73.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0 Confidence: HIGH] # Array family : NA //