Array 1 184104-185151 **** Predicted by CRISPRDetect 2.4 *** >NZ_AUDB01000006.1 Maridesulfovibrio hydrothermalis AM13 = DSM 14728 H588DRAFT_scaffold00006.6_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 184104 28 100.0 32 ............................ ATTTACGGCCCAAACCTTCAGCAGCCGCCAAG 184164 28 100.0 32 ............................ TTTGCCCATAGCGAAGCAAAGCGCACTATGTG 184224 28 100.0 32 ............................ TCCTAAGATTGGCCCCTTGAAGATTGGCCTTT 184284 28 100.0 32 ............................ TACATGCTCTTGGGGAAAGCTTTAAGAAGAAT 184344 28 100.0 32 ............................ TTTAACCGGGAATTTAGCCTTGCTCATTTGCT 184404 28 100.0 32 ............................ TCAAGGAGGCGCGGAAGATCGTTGATGCAGAA 184464 28 100.0 32 ............................ CTTGAGGTCAGCGAAGACTTCGAGTTGACGAA 184524 28 100.0 32 ............................ GCAATGAAGTTGAAAAAGGCATGTTCGTTTAC 184584 28 100.0 32 ............................ TTGCGGGCTGACCGGTTCAGCAAACGTTAGCG 184644 28 100.0 32 ............................ TCAACAGACCTATAAAAAGTATGACTTACTTT 184704 28 100.0 32 ............................ TCTGCAACGGCAAGGGTATCGCTCACTTTCAC 184764 28 100.0 32 ............................ AACACGCAGAAGCTCTTTCTTACGAAAATCAG 184824 28 100.0 32 ............................ CGCAGATCGAAAGCATCAGCAAGACCGGAAAC 184884 28 100.0 32 ............................ TACTCCCAATCTTTTTATGTAGCTGAGTATCT 184944 28 100.0 32 ............................ GTGATGTGATTTGAACCCCGTTCCATGTCAAA 185004 28 100.0 32 ............................ TTAAAAGAGCGGGCATAGCAGTTAATAATTAT 185064 28 100.0 32 ............................ ATATCGGGTGGTGTTCGTCTTCCGGGAGAATT 185124 28 96.4 0 .....................C...... | ========== ====== ====== ====== ============================ ================================ ================== 18 28 99.8 32 GTTCACTGCCGGATAGGCAGCTTAGAAA # Left flank : ATAAGGGAGTACCGCCACCACCGCAAAAACCGACAAGTACTCCGGCCTTGGCAAGTTCCCGCATGGCCGCCTGAGTTACGGAAGTGCCGCTTCCAAGCAAAATATTAGTAGTGTTGGCAATGGGGATATTCCAATATAAAGATTTTTTACCAAGGGTCGTTACATACTCAACCCTCCCATCTTTAACCAGTACACGGCAATGTTCAAGATAAAACAGGTTGGCCCTTTTGGAGTGCAAGATTGATTTCAACTCGGATGGCGATGTGCTATTCATATTTACAGTATAATTTAATTGTGTTTTTTTTGCAATCATTCATGCATACCATTCATTAAAAAAGTTCATTCGGACATGTACGTTTATATTATAATAACCCTTTTTTATCGATCTGGATTTATTTTTACAAATTCAGTATGTTGCAATAATAGTAAAAAAAAAGGGGGTTGTTCGTATTTTTAGTGTAATCCTTTGTTGTAAAGCGATTTTACCGTTTAAAATTGTA # Right flank : AGGCGCGCGGGAAACAGCAATAGCACTGCTCCCGTTCACAGCCGGATAGGGGGAATCCCCATTTTTAATGGCTCTCAAAAACAGAGGCTAATGCCCTTCACATTTATGATTTGATGGCGCCCAGTTTTCCATATACCACGCACGTGCACCATGTATTTGCAAACCGTGATATCGTACATACTCAAGTTGATCCTCGGTGTAAGTATGTCCATGTATGGGTTGGATTGCAGAAACTTCCGCAGGTCCGTAGCCCTCAGTCGAGGACTCAGCAACAAATACTGGTTGACCACAAGAGCCTGAAGGGTGTTTGATAGTCAGTTTTCCTAAGCCGACCCCCTCTGCTATGCAAGGAACATCTATATCTATAACTAAATCCATTTTTAATCTCCTTAAATTTGATTGAAAGAGGGTACATCAGGCTGCACCGACAATGCATTGTGAGGCAATTACATTCAAGAAGTTACCCACGAATATTTATGCAGACGTCCTTGGATCTCCAT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGGATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGGATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 8008-8185 **** Predicted by CRISPRDetect 2.4 *** >NZ_AUDB01000016.1 Maridesulfovibrio hydrothermalis AM13 = DSM 14728 H588DRAFT_scaffold00014.14_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ===================================== ================== 8008 36 100.0 33 .................................... TTCAGGAGCAAGAGATTCTTCAACAAGCGTAGA 8077 36 100.0 37 .................................... GCAATCCCCTCTTCTACAAGGGAACTGCAAGCTGGAT 8150 36 80.6 0 ............................TCCGGA.A | ========== ====== ====== ====== ==================================== ===================================== ================== 3 36 93.5 36 CTCAAAAGAGGTATCCATATCGGTATGGGTTTTGAC # Left flank : ATCTGGAAATCTTAAATTTAATGTGATTGGTGGAAACAAAACATCGTAGACTGCTCGTCAGGTCTACGGTGTTTTAAAAGAAATATCCGCACACCTGCCCCCCTGTAATCCCCTTTTTTAATAAACCTGAATTTAATTAATAAATTTTACCCAAATTAAAGGACAGGCAAAAACAAAATTTGCTGCCCTATTAAATCCCTGCCTTGCGGGAAGAGACGGTAAAACTTATTTCTGATAAAAATGCAGCATATTTATTGAAAAGGTAATACCAAAAATAAAACTGAGTGATCCCTCAACTTTATTTTGGCATTTACCCTGTGGAAAACTTTTTTTGGAATTTTACGGCGTTTTACAACCATTTAAAATAACGTATAAAAAAATGCAAAACCCAAAACGTTTTGCTATGTGCCAGAAATGGGTGTGGAAAAGTGTTGTTTTTTCGGACATAGCTGAAAACAGCTTTGCAAGTAGTTGGAAATAAGGTAGATAAAAACCATAGC # Right flank : AATTTAATTTGCCCTTGACGCAGTTAGGCGTTAAGGGCAAATTGTGTTTATGAGCAAAATAACACGGCACCTCATTGCTTATGACATCTCCTGCGACAAGGAACGCTATAAAGTTTCAAAAATACTTGAAGGGTTCGGTTTTCGAGTTCAGGAGAGTGTTTTTGAGTGTGATTTGACTACTCAATTGAAAGGTAGACTTATTGCTAAACTCGAACACCTTCAGATTGAAACAGGCTTCGTATCCATCTATCCGCTTGGCAGCCATAAACCTAAAGATATCGGCAATGCTCCGCCTCGCATCAATGAAAATTACTCCTTCGTTATCTAAAATATGATTACAAATTTCGCTCCTATTAAGAACCTTGGCTGGCATTGTGTTAAAATTTCCCTGATAAACAAACGTAATAAATTTGCAAAGCAGCACCCGCTGTTTGTGCTGGATGCAATTTTCAAGACGGCTCTAAGGCTCGCGGGATTGCGTGGGTTACAGTATTGTTTTC # Questionable array : NO Score: 5.04 # Score Detail : 1:0, 2:3, 3:0, 4:0.68, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCAAAAGAGGTATCCATATCGGTATGGGTTTTGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.20,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 2 11384-11560 **** Predicted by CRISPRDetect 2.4 *** >NZ_AUDB01000016.1 Maridesulfovibrio hydrothermalis AM13 = DSM 14728 H588DRAFT_scaffold00014.14_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =================================== ================== 11384 36 100.0 34 .................................... GAGGAGGACATAAAGCTACCTCGAAGACTTCTCT 11454 36 100.0 35 .................................... AAATGCAGTCTGCAAGGTATTCAGTGGACGGAGTG 11525 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =================================== ================== 3 36 100.0 35 CTCAAAAGAGGTATCCATATCGGTATGGGTTTTGAC # Left flank : ATAAAAATATTATTACCGCCAAAGACTTTGAACCGGTCACAGCTAAAAAATTTAAACTGAACGGCCGCAGCATGGGGAAAATTCTTGAGTCTTTTGAAAAAGAGATGTGTATTCGCATAGCAACAGAGGCTGGCACATTTGCACAATTGCTTGACGCACAGGTGCAGAATTTGCGGAATTGGGTCATGGATCGTGATGAATTGAAATTTTTCCGTAGCGGAGAAAGGAATCTCAGTTTGGGAGAAGTTGAAATCATTTAATTTTTATAAAAAACATAAAACTGAGTGACCCCTCAACTTTATTTTATCCTTTATCCTGTGGAAAACTTTTTTTGGTATTTTATGGCGTTTTATAACTACTCAAAATAGCAGATAAAAAAATGCAAAACCCAAAACGTTTTGCTATGTACCAAAAAGACCTGTGGAAAAGTGTCGATCTTTCGGACATAGCTGAAAACAGCTTTGCAAGTAGTTGGAAATAGGGTAGATAAAAACCATAGC # Right flank : CGCAGCAAAGCCGCAATCCCTTATTTGGCATTGCGGCTTTATTAAATGTGAAAGTTTACAACAAATTTAAATTGCTAACTACTTGCTATTATTATTTTTTACTGCGTAAACATCCCTTCCACACCCCCTCATATCCGAAGGCCTAGATCAACAAAAACACCATACTCTCCAGCCAGTTTTTCAAATCCAGCCAAGCTATCCTGTACCTGCTCAATACACTGCTTAGATTTTTTCGCACTGATATTTGCAACACCAGCCAGAGCCAATAAGTGTTCTTTATCTGGACTTCGCCCCTCTCCCATTACCAGAGTAGACTGCTCCCCATTAGGGCCACGAGAATATGTGAGGTCATATGCCGGAGCAAAAGTCCATTGGCCAGACTTATCGATACGCTTTGTTACTCATGTCGAGAAAAGCCGTTTTTTTCGACACGTTTTGTTCTCACGTCGAAAAACAACCATTCTTTCGACATATATTTAATTTACCCGAAACCGGTACTG # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCAAAAGAGGTATCCATATCGGTATGGGTTTTGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.20,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [60.0-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 1 100995-101604 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE384340.1 Maridesulfovibrio hydrothermalis AM13 = DSM 14728 H588DRAFT_scaffold00008.8, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ===================================== ================== 100995 36 100.0 37 .................................... GGCTAGAGAAGCAGATTATTGCCAAAATAAATATAAA 101068 36 100.0 35 .................................... CTTGATGTTACTCATATACGCCGGAATGTCATGAC 101139 36 100.0 36 .................................... ATAATTGAGTTTTTCACTCCTCTGTCTATGTAAGAG 101211 36 100.0 37 .................................... TCTGTCAAAGCGAATGGCTCCCTCCCCTCCCTTGGAA 101284 36 100.0 36 .................................... AATACCAGATAACCTCTGGCATACATTTCGCTCATT 101356 36 100.0 34 .................................... CGCATTTAGCCTCATATCGCCAAACGCGTTACTG 101426 36 100.0 35 .................................... TAATAATCGAAAAGTGCACTCAGCCCTTCATAAGA 101497 36 100.0 36 .................................... CCATCTCACTTTTTCTTGCCGCTAAAAGGTTGCAGA 101569 36 80.6 0 ................G...........TCAA.A.A | ========== ====== ====== ====== ==================================== ===================================== ================== 9 36 97.8 36 CTCAAAAGAGGTATCCATATCGGTATGGGTTTTGAC # Left flank : GATGCTGAATTCTACATCTGTTCAGTATGCGGTCACACTCAGGACGGTGAAGCAACAGAAAAATGCCCAATCTGTGGCGCCGCCCCCAAGGCATACGTAAAAGTAGATTAGTAACATTTGTCTCGAATTAAAAGCAAAAAGGCTCTGGCTGAAAAGTCAGAGCCTTTTTACATTCTGGTGAAGAATTGGACCTCTCAAATTGCTCAAGAGGTGGTTAGCGTTGTAAAATATCTTCAATCCTTCAATTAAATATTTATTGAAAAGGTAACTCAAAACAAAACTGAGTGACCCCTCAACTTTATTTTGCCATTTATCCTGTGGAAAACTTTTTTTGCCATTTTACGGCATTTTACAACTCGTTAAAATAACATACAAAAAAATGCAAAACCCAAAACGTTTTGCTATGTACCAAAAACGGGTGTGGAAAAGTGATTTTTTTTCGGACATAGCTGAAAACAGCTTTGCAAGTAGTTGGAAATAGGGTAGATAAAAACCATAGC # Right flank : AATTTAATTTACCTGTGACAAAGTCGAAGCTGTGCGTCACTAATTTTAATATAAATCAACGTGCACACCTCTATGATTTTCCTCTCAGGCTTTACATCAGCACAAAAAAATCCCGCATTACATAAATGCGGGATTTCATTTTAACTGACGACTCGGAATATTTTTACTTAACTTCGCCGGCCTCAAAACCAATTTTGGTTATTACCTCTTTGATTTTTTCAGCATCAACAGGAGAAGTTTCTTTGTATGTGGCATTTGCATTTTCGAGGCTGACATTCACCTCAGTGATGCCCTCTATACCGCTGAGAGCCTTCTCAACAGAACCAACGCAATGCATACAGCTCATTCCTTTAACTTCTATAGTTTTCATAACAGATCCCCTTGGTTGCCCTTTGTTTCTCCGGCAGGAGGTGTAGAGAGGCTCAGCCCGGATCGCTGAAGGCGAGATCATCTATCAAACGCGCAAAACGCATTATGTCTAGTTATTCTCAAGCCACTCT # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCAAAAGAGGTATCCATATCGGTATGGGTTTTGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.20,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //