Array 1 148423-143106 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAAAIR010000006.1 Legionella taurinensis strain Turin I, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 148422 28 100.0 32 ............................ GCCAGTGGGAGGCCATTCATGGTAATCATTCC 148362 28 100.0 32 ............................ CGCACCTTTGGTTCGCTCCCCGGCTTTTGATA 148302 28 100.0 32 ............................ AGTAGTCCAATCGAGATGATCGCCAGGGATCA 148242 28 100.0 32 ............................ TTCTACGGTTTTGTTGTCGATGCCCGTTAGTT 148182 28 100.0 32 ............................ TAGGGCGTGTGGCCGCGGAGGCGCGACATGCA 148122 28 100.0 32 ............................ ACGCTCATCCCCATCTAGCCACACTACAATTT 148062 28 100.0 33 ............................ CAAACATAATTTTAATTGTGAGACGATTTAGTT 148001 28 100.0 32 ............................ TTGCTATTGAGCATGGGGTAATATACTATGAA 147941 28 100.0 32 ............................ TAGTCGACTCTATTCTACCCCCGTATACAAAA 147881 28 100.0 32 ............................ ACCAGTTGTAGGGAAGCATTAATGCTGCGCAA 147821 28 100.0 32 ............................ TCGAAATGGCCAAAAAACTACAAAACGAATAC 147761 28 96.4 32 A........................... CTCTATTTCAATGACGAGGCAATAAACAATGC 147701 28 100.0 32 ............................ TTTTGTTTCGCTACGCTAGAAGATGGATTATC 147641 28 100.0 32 ............................ TTAGAGCTATACGTGCCAAAACAGAAATGTTT 147581 28 100.0 32 ............................ AGCCAATGACACGTGTTCCTCGACCTTTCACA 147521 28 100.0 32 ............................ TGCTTGGATCAACGTCATAACGTACAAATCAA 147461 28 100.0 32 ............................ TTAGAGGTTAATATGAAGAAATTAATATTATG 147401 28 100.0 32 ............................ CACGTATGCGCATGTTTAATGGCCTTATGTCT 147341 28 100.0 32 ............................ AAAACAAAAACCCAATTGTTACGCATCCCCAA 147281 28 100.0 32 ............................ TCTGCAAACACCCGGCGGCAGAGTTTTTCCTC 147221 28 100.0 33 ............................ CCAGAACGATAACCGGCTTGATGCGCGTAAGCT 147160 28 100.0 32 ............................ ATGTTTTGCCACGTATGACGATGGGTATAAAT 147100 28 100.0 32 ............................ AAACTAATTATACAGCTCACGATGACGTCAGC 147040 28 100.0 32 ............................ TCTAAGAAATGACAACAATTGCTTATAAAGAC 146980 28 100.0 32 ............................ TACATCAACAGGATGGCTTTCCAAGAATTTTA 146920 28 100.0 32 ............................ GTGCAACCTGAATATCTTCCGTGCTCACATTC 146860 28 100.0 32 ............................ ATTAGGAATTCGTTATTCAGTAGCCGAGCATT 146800 28 100.0 32 ............................ AATACATGAAAGGGCGTGTCCTAGATGATGAA 146740 28 100.0 32 ............................ TAGATATTTCATTGCTGCAACAATACGGTCAC 146680 28 100.0 32 ............................ CGTATCCAATTTAATAGAGAGGACCTCTAAGA 146620 28 100.0 32 ............................ ATCAATGTCTTCATACATGCCGGCATTGTTTA 146560 28 100.0 32 ............................ ATTTTGTTGTATTCCAGCATGTAGTTGATTGC 146500 28 100.0 32 ............................ CTAAACGCCAGGGGCACATTAAAGTTAAAGTA 146440 28 100.0 32 ............................ AATTGCCCCGCAGCCTGCCGCCGACATAACCT 146380 28 100.0 32 ............................ TATATTTTTGATGGGTGTAAGCTATAGTTATT 146320 28 100.0 32 ............................ GCCGAATACGATCACTATGCGCGCGCCTTGCG 146260 28 100.0 32 ............................ GCGGGAACTTCGGGGACTACCACGTTATCAAT 146200 28 100.0 32 ............................ AATGACTACCTTGAGGTGAGGTATTAATTATG 146140 28 100.0 32 ............................ ATAGACCAAAACTGTCCCATGTTGGCATATCC 146080 28 100.0 32 ............................ TCATACTGTAGATACTCACTTCCGGTCATCTT 146020 28 100.0 32 ............................ AATACCTTTTCCACGGTCCTCTAAAACTTAGA 145960 28 100.0 32 ............................ AGTAGTCCAATCCAGATGATCACCGGGGATCA 145900 28 100.0 32 ............................ TGAACTTTTGCTCCCCCACCTTGGTTTGGGTA 145840 28 100.0 32 ............................ TACAACTGGTGGCTCCAAGCTTGCATGAACAT 145780 28 100.0 32 ............................ AAGCCCGCTGGGCATTGTTGCATGATGCAAGC 145720 28 100.0 32 ............................ TCCAATACAGCCTGAATTTAGAGATGATAGGG 145660 28 100.0 32 ............................ AAAAGCTTGATAGAAAAGCCTATTACGACACA 145600 28 100.0 33 ............................ ATACAGCGGTGATCAAACAGCCGCTAGTTTATT 145539 28 100.0 34 ............................ CCGTTTTAATCGGCGGTTATCAATACAGGGAATA 145477 28 100.0 32 ............................ ATCAAGATAAATGCCGTTTTTCCAATTTGTCC 145417 28 100.0 32 ............................ CAAAGTTTCGCGCGCGTGCGCGGGTGTTGTAT 145357 28 100.0 32 ............................ CTTAAAATCGCAATGCCTTTGTCTTGGCAATA 145297 28 100.0 32 ............................ TCTTTGAATGCTGGCTTGTTATCGATGATTTT 145237 28 100.0 32 ............................ TTTCAACTGATGCCAACAAAGACGTAGTGAGG 145177 28 100.0 32 ............................ ATTATGCCTTGGAGAGGGTAAAATTAAAACAC 145117 28 100.0 32 ............................ TAAGCCAAAAACCCCTGATTCAAACGGAAAAA 145057 28 100.0 32 ............................ AGCCGCATGCTGCAATTAAAAGCCAGAAACTT 144997 28 100.0 33 ............................ ACCACCCAATCATTGTTAACAGAGCCAATAAAC 144936 28 100.0 32 ............................ TAGGTCAAATTGAAATGCTCGACGCTATGGAT 144876 28 100.0 32 ............................ AGTGTTCCCGCTTAAGCATCTGCCCCACCTTC 144816 28 100.0 32 ............................ ACAACTCCGATAAGTCGATAGTAGATTTGGTT 144756 28 100.0 32 ............................ AATATCTTATAAATGGAATACTTAGGGTGAAT 144696 28 100.0 33 ............................ CACGATGTCCGGCGACCCGACACTAATAAAAGA 144635 28 100.0 32 ............................ TTAAACGCGCTTATCTCGTCGTTTATATCTTT 144575 28 100.0 32 ............................ TAACTCCACCGAACCTGACAAAGAGAGGTCTA 144515 28 100.0 32 ............................ CTTGTCTTCGCAGGCGTGCGCTACGCGATAGA 144455 28 100.0 33 ............................ CGACGCTGTATTTGTCAGAAGACGACTCAATAG 144394 28 100.0 33 ............................ TTGAAGAGAAAGTCGGCGATATTTCCCTTAAGT 144333 28 100.0 32 ............................ ATAACGCTCGCCCCATTTCTTTTGCTGATCTT 144273 28 100.0 32 ............................ AACATACCGTCACCCCAAAGGCAAGGACGGCC 144213 28 100.0 32 ............................ TTTATCGGAAATTGCGCCAGACTTATTCCAAG 144153 28 100.0 32 ............................ TTCTTGCATTAAGAGGTTGTATACTGCCCAAC 144093 28 100.0 32 ............................ TATTTGTGTTTCGCTCTTTTATTTTCTAGCAG 144033 28 100.0 32 ............................ AGATACCTGGTTTTTATTCAGTTTACCGAATA 143973 28 100.0 32 ............................ TGCCCAGGCATCGCATTAACTTGCTCGAGATA 143913 28 100.0 32 ............................ GATAGGATCACCAGCCGAACCTTCAGCGTCTG 143853 28 100.0 32 ............................ TCCTGTCCATAATTATTAAAGCACAGCTAAAA 143793 28 100.0 32 ............................ AGCAATCCCTTTGCTGTATTCATATCTCGTCC 143733 28 100.0 32 ............................ TCTCGCAAAAAGGGCATCTTTTGTTTTCATCC 143673 28 100.0 32 ............................ AATATACAAAGATGATCAAGTCGGCGGCATTC 143613 28 100.0 32 ............................ TATTATCTTGTTCAGACGTTGAAAAGTTCCAG 143553 28 100.0 32 ............................ TTATCAAAAGCCATCGCATCACGTTGCCTTAG 143493 28 100.0 32 ............................ ATACATATATGGCGATCACCAAATTTTTATTT 143433 28 100.0 32 ............................ TTACAATTAGTTCGCATTCGCCGTCTAATTTA 143373 28 100.0 32 ............................ AAAATCGGGTAGAGGCCATAAGGAAGGGCTTG 143313 28 100.0 32 ............................ ACTACCTTAAAAAATATAATCCTGAATTGTTT 143253 28 100.0 33 ............................ ATCATGCCGGGCCAGTTGATCTTTAAATCGTTC 143192 28 100.0 32 ............................ AAAACATAGAGCCACTGCCAATCGAGTCTTTG 143132 27 75.0 0 A..........T.T.......A-.C..G | ========== ====== ====== ====== ============================ ================================== ================== 89 28 99.7 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : CTGTTTGTACAAAGTTCCGCACGGTTTATCGCAAGCAACCGACTAAGAGTCAATCCAAATTAAGAAGGTTAATAGAGCGCAGATCATTAACCGAGGCTCAAATTGATCAATACGAAGCAAGCAGGATTGCAAATTTTTTGGATAGTGCTTATTTCCAATTGGTAAGTGGCTCTAATGGAAAAAAACACCGACGATACATTGTGCTGGGTAAAATACTCGATCAGCCTGTGCCCGGGGAGTTTGATCGGTTTGGTCTTTCTAAAACCGCCACTATTCCGTGGTTTAGCGAAGATTTACCATGATAATACTTTGATCAGTTAAAAATGGGGGGATTACCGTATAAATCAGGCCATCATTTAGCCCTGTCATACCTTTAATTTTTGCTCTTTAAAAATTTCTAATAAATTCAATAGATTAAATCTGTGAGGAAAAGCATTGGGTAATTGAAGAATTTTTCATTAGGTTATTGTTGTTACTCGGTTTGTGTGTTTATTTGTTCG # Right flank : AATAAAAAAGTGTTTTCAAAAAACAAGAAGCTAAAGGAATAACTCGATCGGTAGTATCTACCCCTACCCCCATCTATGCCAACCGAATCCCTCGACGCGCCATGTGCCTTTGCATCAGAAAAGCAGTAAACCCCATCAGCGCGCCAAGAGCGACAGCGATGACGCCTACCCAGAGGTAATAATACTGGTAAATGGGGAGCGTTTGCTCCGCTGATTTAACAGCTTCGGGGATATCAACCCAGCCTGCCAATTGTCCGGAAATGGCATTGGACAGCGAGCTTGCAAGGTACCAGACGCCCATGGCAAAGGCGATGTTTCGTCCATCGCAATAAAGGCCGATCATGCTTAAGCCGATGGCGCTCACCCATAATTCGGCCAAGGTAATCAGCATGTAGGTAAGCGCAATGTAATTCCCTTCGACATAGCCCTCGACAGCCTGCTGTGAGGCAAAGGCCATGATCAGCAGCGCCAGACCGGACAGGAGCGTTCCTGCTGCGAAT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //