Array 1 2209982-2202332 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP060390.1 Psychrobacter sp. KCTC 72983 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ========================================================================================= ================== 2209981 28 100.0 32 ............................ TGTGCATCATCGTCATCACGAGTGGCGATATT 2209921 28 100.0 32 ............................ AAACGGCTTGCAGACGCGACCATCTGCAAGCA 2209861 28 100.0 32 ............................ GTCTAGTAAAATAGATGCTGCGCCATCGACTA 2209801 28 100.0 32 ............................ CGTGCAAACGTGGTTGATGGCGCATTTAACAA 2209741 28 100.0 33 ............................ CTCAACCACAGCTTCAAAGTTTGTAAACTGCCC 2209680 28 100.0 32 ............................ TCTTCACAGTTGAAAGACATTCGTTCCATTCC 2209620 28 100.0 32 ............................ ATGCCGACCGTGATTTCGATTTCGCGGCGCTC 2209560 28 100.0 32 ............................ AAGCTGAGCAATTGGCACTTGATGAACGTCGC 2209500 28 100.0 32 ............................ ACTTTTCATCCTGCCCTTCAAACACCCACTGA 2209440 28 100.0 32 ............................ ATTAAGTTAATGCCCATGCTGTTTGTCCGTGC 2209380 28 100.0 32 ............................ CTGCATACGTGCTTTATGCTCGTGCTTGGGGA 2209320 28 100.0 32 ............................ GTTTTGATCCTTGCGTTCATTTGCGTTCATTT 2209260 28 100.0 32 ............................ CCATACCTAAAAACCTGCCCAGCCATTGTCCG 2209200 28 100.0 32 ............................ TTTCGAGTGATAATTGATTTGTGGACATGGTT 2209140 28 100.0 32 ............................ TGCCAGCGATTGATTGTCGCGTATCTCAAAGT 2209080 28 100.0 32 ............................ GCATGGAACCGCTAGAAGAGTCGGCAGAAGAA 2209020 28 100.0 32 ............................ GCAAGCCTTTGCAGATCTAGGGCGCGACAGTT 2208960 28 100.0 32 ............................ GCATAGAAACAGCAAGGCTTGCGCTGGCAAAT 2208900 28 100.0 32 ............................ TTGCTGTGATTGCTGTGGTTATTGGTATCGCC 2208840 28 100.0 32 ............................ GTCATCCGAAACCTGTTAGCCCTGAATGGCAA 2208780 28 100.0 32 ............................ GAATCATCAGCTCACCATCTTCGTTTGGCTCT 2208720 28 100.0 32 ............................ TGTTAGACCGCCTGCATTAGCCAGTAGCGTGA 2208660 28 100.0 32 ............................ ATCTTGCTCCAACTGGTCCGGCTGGAAGTAAC 2208600 28 100.0 32 ............................ CAACAAAGAGCGCTTACTCAGCAAAATTCGCG 2208540 28 100.0 32 ............................ GATCAGACGCAACTGATCAGGGTTTACCTACT 2208480 28 100.0 32 ............................ CTGTTCTCATAATGAATGCGATGACCACCAGG 2208420 28 100.0 32 ............................ GCTAAAAACCCTATCCTGTTTGACTTTGACAA 2208360 28 100.0 32 ............................ CATGATTAAATTCCTTGTCTTACATTCTGTGT 2208300 28 100.0 32 ............................ TTTTCGATTGTCACAGTAACCGGCAAGTCCAT 2208240 28 100.0 32 ............................ TCGCTCACGTCACTAACAAGACACTCGACAGA 2208180 28 100.0 32 ............................ GTCGCTACCACCCATTGAGTCGACCCAGTAAA 2208120 28 100.0 32 ............................ AGTTGATACTTACTGGGATTTAGGTGTGTCTG 2208060 28 100.0 32 ............................ AAATGTCGGCCAAGTACGCAGACGAGTATAAA 2208000 28 100.0 32 ............................ TCTCCCTTTGGTTCTTTGGGTAAAAATGCAGT 2207940 28 100.0 32 ............................ GTCATTGTCCGTGTGCATGTGGATGATGTTGA 2207880 28 100.0 32 ............................ CAAAGAGCCAAAAGGCGAAGTCACAGGTTATA 2207820 28 100.0 32 ............................ AGCCGCAGCATCAGGTCAAGTTAGCAAACAAA 2207760 28 100.0 32 ............................ TTACGTGCTTAGCATGAGCTTTGAAAAAGCAG 2207700 28 100.0 32 ............................ GCTAAAAACCCTATCCTGTTTGACTTTGACAA 2207640 28 100.0 32 ............................ CATGATTAAATTCCTTGTCTTACATTCTGTGT 2207580 28 100.0 32 ............................ TTTTCGATTGTCACAGTAACCGGCAAGTCCAT 2207520 28 100.0 32 ............................ TCGCTCACGTCACTAACAAGACACTCGACAGA 2207460 28 100.0 32 ............................ GTCGCTACCACCCATTGAGTCGACCCAGTAAA 2207400 28 100.0 32 ............................ AGTTGATACTTACTGGGATTTAGGTGTGTCTG 2207340 28 100.0 32 ............................ AAATGTCGGCCAAGTACGCAGACGAGTATAAA 2207280 28 100.0 32 ............................ TCTCCCTTTGGTTCTTTGGGTAAAAATGCAGT 2207220 28 100.0 32 ............................ GTCATTGTCCGTGTGCATGTGGATGATGTTGA 2207160 28 100.0 32 ............................ CCGATGGGTTTACTACAATGGCTAATGTTGCA 2207100 28 100.0 32 ............................ TGAAGAAATTGGCAATGAATACACGGTCGAAG 2207040 28 100.0 32 ............................ AGCTGTATGATTCGCATACAGGCTCATCTCAC 2206980 28 100.0 32 ............................ GTAATCGTCAGCATCGTTAAATTCCGTATCTA 2206920 28 100.0 32 ............................ TGAGTACGATGCTAAGTGTGAGGAAAACGCGG 2206860 28 100.0 32 ............................ GATAAGCAAGTCAGCATGAGCGAGCTCGCAAA 2206800 28 100.0 32 ............................ TTCAAGAAGACAATGGACGCCAACGCATCAAA 2206740 28 100.0 32 ............................ GCACATTAGCCCCTGCGGCTGGGTAAACTCAA 2206680 28 100.0 32 ............................ AGTGAGCGACAAGTTGCTTGTCCTTCCTTAGT 2206620 28 100.0 32 ............................ GCAAGTCGTTATGATTAAGCAGGCGGCTAAAG 2206560 28 100.0 32 ............................ ATTCAATGTGGATCAGGCGTTGATCTTGATGT 2206500 28 100.0 29 ............................ GAATGTGGGTCAGGACGTATGATCTGACT 2206443 28 100.0 25 ............................ AATGGGGAAGATGAAGAAACACCTC Deletion [2206391] 2206390 28 100.0 31 ............................ TTGGGGTTTACCCCCAAAATTTTGATCGGCC 2206331 27 82.1 27 T.........C...G..-......A... ATACAGCAAACACGGGGATTGAATACC C [2206320] 2206276 26 85.7 28 A.....-..........G......-... TATAAAAACCATCACGACCACGCAGCTT 2206222 28 92.9 31 ..........C......G.......... AACTGCATAGTTTTATATGAAGGCCCGCTAA 2206163 28 96.4 27 .....C...................... TCCCTATTTGCACCTAGATAAAAAAAT 2206108 28 92.9 30 .....C....C................. TCAATGTCACTGGCAATTGGATTACCCAGG 2206050 27 89.3 89 .....C...........G..-....... TTTCCTCGCTATCCAGTTTTCAAAAAAACTTTTTCCTCACCGATTTGGGACTTGAAAAGCAGGGAAAATTTTTTTTGTGCCAAAAACCT 2205934 27 85.7 31 T....C.....-............A... TTTATAAATTTCGACTTTGCACCGCCACACT 2205876 27 85.7 28 T....C....-......G.......... CAAATATACCCATCAATTTTTGGAGGCC 2205821 27 82.1 79 T....C...........G.-...T.... AATCTTATGCTAGCTTGGTGCATATCTTCCTCACCGTTGACTTAGAAAAACCCTTACCGCCCCCTTACAAATTTTTACC 2205715 27 78.6 26 T....C........-.....T.G.A... GCTACAAACTAAAGGGGACTGCTTTC 2205662 27 92.9 33 ............-..........T.... AATTTTACGGCTAGACATACGTTTTTTATTATT T [2205639] 2205601 28 100.0 32 ............................ TAAGCCTGAATTGCTTGAGCCTACACACACAG 2205541 28 100.0 32 ............................ TAAGACTGCTTACTGCTAGAGCCAACAACGGC 2205481 28 100.0 32 ............................ TGCGGTCGCACTGCGTCGCCGCGAATGGGCGT 2205421 28 100.0 32 ............................ AGCTCAAGCGCGTGCTCGGTCTTTAGCTGTTT 2205361 28 100.0 32 ............................ ATGCTACAGCTCGACTTCTTCTGGCTCGGCTT 2205301 28 100.0 32 ............................ ATCGACTAATACGAGGTATAAGAGTTTTAGTA 2205241 28 100.0 32 ............................ CTCACCCAACAACTGAGGGACAGCAATTAAAA 2205181 28 100.0 32 ............................ GTGTGCAGCGGTGGGTAGGATATAATTGCAGA 2205121 28 100.0 32 ............................ GCACGATGATGCTATCCGCTTGCGTGATTATC 2205061 28 100.0 32 ............................ CATCAATTCATAACTTTGATTAAGATTGTCAA 2205001 28 100.0 32 ............................ TTCCCCAACAGTCTGGGGGACTTTGTTATCCA 2204941 28 100.0 32 ............................ GTTGATTGGATTATTGGCTCAGAGCGCCGCAC 2204881 28 100.0 32 ............................ TCGATGTCCAGTCTTAGGCGGCTTTTTTGTGC 2204821 28 100.0 32 ............................ TGCGATTTGGTGAGGTCGTTATGTGATTAAGC 2204761 28 100.0 32 ............................ TAGAACTGAACCCAGCGCCGGCAATAAGCTCT 2204701 28 100.0 32 ............................ CTAATCTGGCACGGTGCGTCAAGCGTTATCAT 2204641 28 100.0 33 ............................ CGGTGTTATCATGCCGTGTTGCGCAGCATAGTA 2204580 28 100.0 32 ............................ ATTACCTCGCCTGCCTTATCGACCCATTCGGT 2204520 28 100.0 32 ............................ GAATGACCCTGGTGGCGAAACCATGTATGGTG 2204460 28 100.0 32 ............................ AACGAGACACCCACTAGCAGGTGACGCTGCAC 2204400 28 100.0 32 ............................ GCTGGGCTTCATCGTAAAATACGGTGCAGTTA 2204340 28 100.0 32 ............................ CATATAATTAATGGGTATATTTACATCAGTAG 2204280 28 100.0 32 ............................ ACATTCACACACAAGAGCAGAAGCAGGGACAA 2204220 28 100.0 32 ............................ AACCCCATTTTCGTCCATAAGGTCTTGCCAAT 2204160 28 100.0 33 ............................ GTAAATATCGGAAAGTCAAGAAAGGCGGCGGGG 2204099 28 100.0 32 ............................ AACAGTCGGAGCATAATTAACAGTAGATTGTA 2204039 28 100.0 32 ............................ ACGACTGATCCTGATACTGGCGAAAAATCGCT 2203979 28 100.0 32 ............................ CCTATCGAAAACGAGCGCCGGCTCCAAAGTTT 2203919 28 100.0 32 ............................ TTACAAGCGATTTATCATGTTCTGATAATAAA 2203859 28 100.0 32 ............................ TTCTTGAGTATCCGTAGGATTAATATATTTAA 2203799 28 100.0 32 ............................ TTTACGGGCAATCATACCAATGATAATACCGA 2203739 28 100.0 32 ............................ CGAATAGGTTTTGCAAGCGCTAATACGTTTAA 2203679 28 100.0 32 ............................ GAAATATGAGGAAAAGGACGGCACAAAGGTTC 2203619 28 100.0 32 ............................ TTGCGAGTCCAACAAAGGTATTTTTCTACCGT 2203559 28 100.0 32 ............................ AGCCAAACCGCCTACGTCTGCCAACGTGGGCG 2203499 28 100.0 32 ............................ ACACCGATAGCGCGTAGCATCTCTTTTATCGG 2203439 28 100.0 32 ............................ AACGCTTGCGGGTTTTTTGGCTCAATGTCAAT 2203379 28 100.0 32 ............................ CCGAAGCCCCAACTGATACTGGCGTTATAGTA 2203319 28 100.0 32 ............................ GATATTGAGTGGGATGAGATCGAAGCGGATGA 2203259 28 100.0 32 ............................ AGCAGGTAAGATAATCGCTTCACCTTCTTTGA 2203199 28 96.4 32 ....A....................... TCATGGTCTAAGACGTATCGCATGGTCAAAAA 2203139 28 96.4 32 ....A....................... ATAAGCAAATAGAAAGTAAGAGCAATGATAAA 2203079 28 92.9 32 ....A.T..................... TGTATGATCCCATCTAAGCGAGCAATAACGGC 2203019 28 100.0 32 ............................ TTTGATAAGCACGCTCTTGCTCGCGTCATGAT 2202959 28 100.0 32 ............................ TTAAAAGCAAAACAAGATAAGAAGCTGCCAGT 2202899 28 100.0 32 ............................ ACCACCTTTGGAGTCTTAAATGGTAAATCGTT 2202839 28 100.0 32 ............................ ATCAATAGCGGTGTCGGCTGGCGGGTTGTATA 2202779 28 96.4 32 ....A....................... GCCAAAGTCAGACTGCTGCGCGGCAAACGCAT 2202719 28 96.4 32 ....A....................... CATAGTGGCGATTTTTTTATGCGTCAGATTTT 2202659 28 96.4 32 ....A....................... GTGGTAAAACCCTGCGTTTGCTAACGCTGTCT 2202599 28 96.4 32 ....A....................... TCATGAGGATTGACTAGGTTGTCGTTTGGATA 2202539 28 96.4 32 ....A....................... TCAAAGAAGCTAGCAAGCTCTTTATCTGTTGA 2202479 28 96.4 32 ....A....................... AGTTTGCGGCTCAACGTAAATCACATCATCAG 2202419 28 96.4 32 ....A....................... ATCCAAACGCAGTAGTTGCACTGGCACATGGC 2202359 28 96.4 0 ....A....................... | ========== ====== ====== ====== ============================ ========================================================================================= ================== 127 28 98.6 33 CTTCCTCACCGCATAGGTGACTTAGAAA # Left flank : GATTATGTGCATATCAAAGGCATCAAAGAAGTACCGATAGACAAAGCCACTGGCTATGTCAGTGTACATCGTTACCGCTTTAAACCTGCTGATTTGCAAGCGGACTCATTAGCAAATAAGCTTGGCGTCAGTTATGAAGACGCTATGGCAACCGTGAATAAGCGCGCACCTGAAAAGGCTGTGCCTTATATCCAAATGCGCAGTCAGACCAATCAAAGCAATTATCGTTTACGGGTGCTACAGCTACCTTGTGATGCACCAAAGGCTGGCAATTTCAATACTTACGGTATGAATGGCATGTCTGATCATGTCACCGTACCGCACTGGTAAAAAAGTCGTTACGCGCGACCCAGAAAGAGGATATAAAAACCCTTTTTTTGAGATATTTAAAAACTTGCAATAAAATCAACCAGTTATAACAGAGTGAAAAACGGAGGGTGAAATAAGGTATTTTGACCTCCACGCCTTGTTGTAACTAAATTTTTTGAGGTATAATTCCT # Right flank : TTTTGCTATGGCTGCTCCTGATAGTGTGTAGTGGTCAAATATTTTTAGACAGTACTTAAGAGGTTTTTGTTGAAATAAAGTCTCTCTTTCTCGCTTGGTGTTAAATACTCATTAAAGCTGTGTGGTCTTACACTTTGATAATAGCCCCAAATATAATCATTTACTGCCTGCCGAGCCTCATCAATATTGTCATAGCCGTTTTTTGGCATCCACTCTGTCTTAAAGCTTCTAAAGAACCTCTCTGTAGGTGCATTGTCCCAACAGTTGCCTCGTCGGCTCATACTATGCGACATACCATTGCACTTGGCTACGCATTTAGCATACTCTTCACTGGTATAATGACTGCCTTGATCTGAATGAAACAGCACGCCTTTAGGCTCAAGTCTTATGTGATATGCCATTTTTAGTGCAGATGTGGTCAGCTGGGTATTCGGGCTATCTGACAAGGCAAAACCAACAATACGTCGAGCATATAAATCCATAATGATGGCTAAATAACA # Questionable array : NO Score: 6.13 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:-0.05, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCCTCACCGCATAGGTGACTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched CTTCATCACCGCTCAGGTGACTTAGAAA with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.80,-6.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //