Array 1 49445-51979 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHCZZ010000009.1 Streptococcus lutetiensis strain P4561CNA1 KS32_NODE_9_length_95340_cov_578.278_ID_553, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 49445 36 100.0 29 .................................... TTATGTGGATAATGGAGATATCTCGATAA 49510 36 100.0 30 .................................... CAAACATCCCATGTGGATGCGGTTTAATAG 49576 36 100.0 30 .................................... TGTAACAAAGGTGCAGAATGACAGCGCTGT 49642 36 100.0 30 .................................... CGTTCTGGAGACACACTTTCTAGCATTGCT 49708 36 100.0 30 .................................... ATAGCTGGGAATTTACAATTTTTAAAACCA 49774 36 100.0 30 .................................... TTACTCGTTGTTTTATTCCATTCAAGGTTT 49840 36 100.0 30 .................................... ACGCTAGTCCTTTTTTATTTGCGTTAAAGA 49906 36 100.0 30 .................................... TGTTTGGAAGGACTGGCGCTACTATGCTGT 49972 36 100.0 30 .................................... GAACCACTAAATCCAATAATTCTCCGTTTT 50038 36 100.0 30 .................................... TTTAAACACACCTTACGTTATAACTGGGAT 50104 36 100.0 30 .................................... GCTGGCATTTCGAACGGCTTCGAAAGCATT 50170 36 100.0 30 .................................... CTTGCACGCTTGATTTGTGTCAACGGTAAA 50236 36 100.0 30 .................................... TCCATATTCAAAGTCATCTTTAATTGACTC 50302 36 100.0 29 .................................... GCATTCCACGGGATGCCGTAAAAGAATGG 50367 36 100.0 30 .................................... GAATTCCAAGAGATGCAGTAAAGGAATGGA 50433 36 100.0 29 .................................... CTAATCGAAGAGGGATCTACTCCGTATGA 50498 36 100.0 30 .................................... TCTTGATAGCAAAATGGCACGAATCATCAA 50564 36 100.0 30 .................................... GCTTTCTCTACTAGATACTATCAATCGTCT 50630 36 100.0 30 .................................... CCCCAATCACTCATGAAACTAGAAGTGGCT 50696 36 100.0 30 .................................... TCAAAGCTTGCCAAAGACATTTGGATGATT 50762 36 100.0 30 .................................... TGGTACTCTAACTCGTGGATAAGACCCCCA 50828 36 100.0 30 .................................... TCGGCAGTCCTATCACCTTTTTTGTTTGTT 50894 36 100.0 30 .................................... AATGAATAAACAAGAACTAATTGACAAACT 50960 36 100.0 30 .................................... ATGCTGTTGACAGCGATTGGGTGTTTAAAT 51026 36 100.0 30 .................................... AATGTAATTAAAGATAAAGAAAACGAGGAA 51092 36 100.0 30 .................................... AATGTCCTCCTTTTAAATAATATTAATGAA 51158 36 100.0 30 .................................... TTCGGTGAACCTCTGAAGCCCTCATTTCCA 51224 36 100.0 29 .................................... CACACAAAGACTTTTTTAACAGACCAGCA 51289 36 100.0 30 .................................... GTTGGCTTATTATCAAAGTTTCGACAATTT 51355 36 100.0 29 .................................... TTCTGTTAATTTAATCTCAACACCATCAA 51420 36 100.0 29 .................................... GCGTCTTCGGTTAACAACTACCGCAGCAC 51485 36 100.0 30 .................................... CGGAGAAGTTGTTGATATTTACAGGGAGTG 51551 36 100.0 30 .................................... TTGTGTATCCGTCTGCTTTGATGGATTCAT 51617 36 100.0 30 .................................... AATTTGAGTGTAAGGGATAGATAATAAACA 51683 36 100.0 30 .................................... GCAAAGCCTACAACATTGATGCTATCGCAG 51749 36 100.0 30 .................................... AGCAGTCAGTTTTGTATTGATAAGATTGTT 51815 36 100.0 29 .................................... ACGTAAAAGTTAGCGGTGTTAACTTGCTA 51880 36 100.0 30 .................................... AAAAAATTAAAAACAAAATAGAAAGAGGAC 51946 34 83.3 0 ......................--C...ACC..... | ========== ====== ====== ====== ==================================== ============================== ================== 39 36 99.6 30 GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC # Left flank : ATGGATGATTACCTTGATTATGCCTCATTTATAAGAATTTGTCAGGTTATCACAAGAATGGCTGATGAGTTTCCAAATTTTTATTGTACGATTTTTCCGTCAAACGAAAGCTACTTGTATGTGACTAAAGAAACAATAGAAAATATTACCATTGTTTCAGATTATATTGAATCTTTGTTTGATCTTGATTTTATGTATGAAAGGTTTGTTGGAAGATATCCATCCAACAATGTACCAACAAAAAAAGAATTTTTAATTCTTTTACAGAAGAATGCAAGTTATTTATTTAGTGAGCAAATTTCATATGTGAGTTTAGGAATTTCGGATATGGTAGCTATCAAGATACTAAATAGTTTATATCACTATGATAAGTCAGTTAAATATCCAATTTCAGAGATAAATCAGCTTGAAATAAGCTTTCTTAAGGATAAAGATTGACTTTTAGGCTCAATGAAATTATAATTCTTGTAGAGTATAAAGACCCAAAATGACGATTTGAG # Right flank : CCCCACCTAGTTCGTCACTGGGTGGGGTAATCTATGTGGGTCATAGGTTTGTGATGAGTTAAGTTTTTATTACCTTTGGTTAAATAATAGCGCTTTCTACAAAACTTGTAAAATGATTTGTGGTAGCTGATTTTAGCGATATTTATCGCGCCTAGAAAACTTTTTATAGCACCAGTGGTGTTTATTTGTTATAATAGAATAATGAATAATTGTATAGGATTATAGATAGATGGATATTCAAGAATTAAAAAAACGACAAGAAAAGATTCGCAATTTCTCAATTATTGCGCATATTGACCACGGGAAGTCAACTTTGGCTGACCGTATTTTGGAAAAAACTGAAACTGTCTCTAGTCGTGAAATGCAAGCTCAACTCTTGGATAGTATGGATTTGGAACGTGAACGTGGTATCACAATCAAATTGAATGCGATTGAGTTGAATTACACAGCTAAAGATGGTGAAACTTACATTTTCCACTTGATTGACACACCAGGGCACG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: F [matched GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.37 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //