Array 1 1748749-1752662 **** Predicted by CRISPRDetect 2.4 *** >NZ_BIFQ01000002.1 Dictyobacter aurantiacus strain S27 sequence2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 1748749 37 100.0 36 ..................................... TCAACTGGCGAGCTCGAGACGGTAACCGTGTAGAAA 1748822 37 100.0 36 ..................................... TCCCAGTGAAGTAACGAACAACATCATGCCATTTCT 1748895 37 100.0 36 ..................................... CATAGCAATACGTACAACACCATCGCCCACATTGTC 1748968 37 100.0 36 ..................................... AAAAATGGAGCTGCAAAACTGGCTACGGTTGGCGGC 1749041 37 100.0 36 ..................................... TAGGAGACAGGGCTGGTCAAGCTTGCCGCGTCGGTC 1749114 37 100.0 35 ..................................... CTCAAAGTTGCGGGGCGAGGACTGCCCCGTGATCC 1749186 37 100.0 36 ..................................... ACGTATCAGTAGCTGGGTTGAATTCCGCAACAATAT 1749259 37 100.0 36 ..................................... AGCAGCAGAAACAAGAGGCTTAGGGGCGCTTATTGC 1749332 37 100.0 36 ..................................... ACAGATGCAGCATTGCCGTAAGATTTAAAGTCGAGA 1749405 37 100.0 36 ..................................... CTTTCATTGCCGTACCTCCGTTCGGGCCGGGCGGTT 1749478 37 100.0 36 ..................................... ACGCTGACATCGATCCGGTCAATCGGAGTCGGTGTC 1749551 37 100.0 36 ..................................... ATCCAGGCGGTGAAGGCGTGCCAGGCGCTATTCACT 1749624 37 100.0 37 ..................................... TTGGACGGGCTAAAGGTGCCCGCGCCCACGCTGGCGA 1749698 37 100.0 36 ..................................... AGGGCGAGAGCATCTGGACAAGGTTGTCGCTTCGGT 1749771 37 100.0 35 ..................................... CCAGAGATAGGGTTGGCGCCAGTGCTGGTCGCTCA 1749843 37 100.0 36 ..................................... TCAGTGAAGCGAAGCGCCTGCTCATGCCAGCGTCCC 1749916 37 100.0 35 ..................................... ATGACAAAGAGCCCATCTGAGGCAATCTCCTTCGC 1749988 37 100.0 35 ..................................... TGAGGGAGAAGGTGACTTCAGGATCTTCGGGGGAG 1750060 37 100.0 36 ..................................... GCAGCGATCCCCTCTCCACGCACTACACGATCGCTT 1750133 37 100.0 37 ..................................... TTTGCATGATGCCATAGGACTGGACCGTCACACGCGT 1750207 37 100.0 37 ..................................... GCTCTGCCGTCGCACAAGCAGCACAGCAGTTAGTCGC 1750281 37 100.0 38 ..................................... CCACATCGGGGGGGATCTCATTCCCTTTGCGCAGATAG 1750356 37 100.0 38 ..................................... TACGTCCTCCACTCGTTTGCGCACCCCGAATACGACAA 1750431 37 100.0 36 ..................................... TGATCCGCTCGTCTCCACGGCAGATAACCACATCAC 1750504 37 100.0 36 ..................................... GCTGCATCGATGTGAGCCGCCATCTGCTCGTTGGCC 1750577 37 100.0 38 ..................................... ATGGGACGAAAGTTGTATCGCGTTCCCCTCGATTTTTC 1750652 37 100.0 36 ..................................... CACCTGGAACCCTCTGGTACCGGCATATACCCTGAA 1750725 37 100.0 36 ..................................... TCGAATTGCTAAACTCTTGCAATTGATGGGGGATCG 1750798 37 100.0 36 ..................................... TGTACTGCAGCCTGCCTATAGTGGGACCGCTGGCCT 1750871 37 100.0 35 ..................................... TTAGCTGGTTTGTGAACTGGGAATATGCGATGACA 1750943 37 100.0 36 ..................................... ACTGGAATGTGGAAATCGATGGCCTGGAGGCGTTGT 1751016 37 100.0 36 ..................................... TGTACTGCAGCCTGCCTATAGTGGGACCGCTGGCCT 1751089 37 100.0 35 ..................................... GTACCATAGGCGCTATTGACGCCCCCACTGACGAC 1751161 37 100.0 35 ..................................... AAGTACCGTACCGCATCCTGCATGATTTCGGTTGC 1751233 37 100.0 38 ..................................... GTGCATGATATTCAAAGCATGGACCTGCCCTTCAAAAT 1751308 37 100.0 35 ..................................... TTAGCTGGTTTGTGAACTGGGAATATGCGATGACA 1751380 37 100.0 36 ..................................... ACTGGAATGTGGAAATCGATGGCCTGGAGGCGTTGT 1751453 37 100.0 35 ..................................... CCCTGGTTACCTGTTTGTCTCATCGCTTAATTAAC 1751525 37 100.0 35 ..................................... TCCTCTATCACATCGGCATTGAGCAACTGCTTATC 1751597 37 100.0 36 ..................................... AATCTTAGAGTGGCAAGGAAAGCCGCCGATTGGGCG 1751670 37 100.0 37 ..................................... TTCTGCGTGGTGGAGCTGCACTACCACCGTTGCTGAA 1751744 37 100.0 37 ..................................... GAGTCGTTGACCGTGCGCCAGAAGATGCCCTGCCCGT 1751818 37 100.0 35 ..................................... AAGTCTCTGGTATTCGCGAAAGAAAATCAGCCCGT 1751890 37 100.0 36 ..................................... ATTGATGACACTCGAAGCAGAAGATTTCCGCCGCAT 1751963 37 97.3 36 .......................A............. GGTTAAATCGCTGGCCAATGCCTGCTCGATGCTCAT 1752036 37 100.0 38 ..................................... GGATCAGTGAAGACTTCTCGGTCAAGCCTTGGTATTAT 1752111 37 100.0 36 ..................................... GTGGGATGGGAACGAGGAAAGTGCAGTAATGGAATG 1752184 37 97.3 37 ....................................T GCGTTGAATGGCGGCGACTTTATCCGCTCCCAGTTGT 1752258 37 100.0 39 ..................................... CATAACAACGTATTTGATAGTCATAGGAAATGCTCCTTC 1752334 37 100.0 36 ..................................... CAGAATGTCCCAGTCCCACCGCTCACTTGATGCTAT 1752407 37 100.0 36 ..................................... AGCTTATCATATGCCGGGGCATTCGACATGATCATG 1752480 37 100.0 37 ..................................... CAAAACGCGGCCGACTTTCCCGACTTCGATTGGATCA 1752554 37 100.0 35 ..................................... GCGCCGTGATCATTGATCCAGTTATAATCCAACTC 1752626 37 83.8 0 .....G...G...AA.C.......C............ | ========== ====== ====== ====== ===================================== ======================================= ================== 54 37 99.6 36 GTCGCAGAGAAGCTGGTATCCCGGTAGGGATTGAAAC # Left flank : CTCTGTAGAGATTGATACAGGCTGAGAGTGGGCTATACCATTTTCCATGTTGCATTGGGAGTACCTTAAGAATCCTTTGTTTTGGAATTTGGCTGTCAATTGGCTGTCATGCGGGACGCTGAATTTTCGAGATCATTCCCTAAAGCCGCTCCTCAGGCCCTTTTATTCTAGACGCTTTTTGACTCCCTGTTTGATAGGCAGTCCTATCCAACGGGATGCCTTTCTCGCTATGTTCTCTGTACCCTAATCCTTTTCACAATTGTTTCATGTTTTATGAAAATCTGATTTCGCGAGGCACGAAGCGGTGAAAACGCCAAGCTCACTGCCTCGCAAAACGACATGGATGTCGTCAAAAGGCTCTACAAGCTCTTGTAAAGGATAAGGAACTCGTGTATAGTGTCTTTGTATGCGGCAGAAATTATCGTGTAAAACCTAGATTTTACTGCTGCCTCGCAAAAGTCATTTTGAGCCCGCTTTCCAGGCGTCGCGAGGCAGATGCT # Right flank : CCCAATAATGGCTTTATAGCGTACATCGTGACGAGCGTGTCGTAGAGGAACTAGTGGACTGTCAAAGATGATTTGAAACGGAGGAGAAAAAAGAGTATCCTTGCGGGCAAGAACAAAACCACCTCGCAAGGAGCTTCTCGTGAGCAAGCATACCATTGAATTGACATTCGAACAATGCCAGCAGTTAGAACGGCTGGTAAAAGCAGGAAAAGCACCAGCGCGCCAGATCCTGTTGAAAACCGACAGCAGCCAACAGGGTCCGGCATGGACCGATCAGCAGATCCAAAGCGCTTTTGGAGTGGGTCGAACCACCATCTGGAGAGTTCGTGAGCGCTTCTTGAGCACCGGGTTGCTTGATGCGCTTGCCCGACGGGAGCAACCGGATCGACCAGAAAAGCGCAAGCTGGATGGAGAGAAAGAGGCCCATCTGATTGCGCTCATTTGTGCTGGTCCTCCAGAAGATCAGGAACGTTGGAGTTTGCGTCTGCTGGCGGAGAAAC # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:0, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCAGAGAAGCTGGTATCCCGGTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [10,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.80,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : NA // Array 2 1766217-1769033 **** Predicted by CRISPRDetect 2.4 *** >NZ_BIFQ01000002.1 Dictyobacter aurantiacus strain S27 sequence2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 1766217 37 100.0 35 ..................................... ATGTAGTATTTTTCGTAAATCTAAAAGTACATTAA 1766289 37 100.0 35 ..................................... ATGGTGCATACGATCCGCAACGAACCGCCCTTTGC 1766361 37 100.0 36 ..................................... ATGCATGTTTTGTGGGGATGGGCTTTTTTTGGGGGG 1766434 37 100.0 38 ..................................... TTCAAAGTCGCTCTCATGAGCATGGGTTCCTGGATGAT 1766509 37 100.0 35 ..................................... ATCAATTGGGGTAAGATGAACCTGTTCGTTTCTCA 1766581 37 100.0 36 ..................................... TGTTACCTCGTGCTTGCCGGGAAGCTTCCGCTTACT 1766654 37 100.0 37 ..................................... AAGATGGACGGGTTTTGTGTTTCGGGCGGGTTGATCA 1766728 37 100.0 36 ..................................... AAAAATGGAGCTGCAAAACTGGCTACGGTTGGCGGC 1766801 37 100.0 36 ..................................... CAACAGCAACGGCGATCTGACGCTTTCCGGCTATTA 1766874 37 100.0 36 ..................................... AAGAAACGGGCATTCACGAAGTCAAAGGTATTGTTC 1766947 37 100.0 36 ..................................... ACGCTGTAGAATGGCTGCTGCACCACGGTGCCGTTG 1767020 37 100.0 40 ..................................... AGTGACTATGATGATAATATGGCTGGTGCGTCTCCCTACC 1767097 37 100.0 36 ..................................... TTTCCTCCTATCCGCATGCGAATTAGAGTGGACTCT 1767170 37 100.0 36 ..................................... ACTGTGAAACAAAATTATTAGCCCGGAGGAGGCGCT 1767243 37 100.0 37 ..................................... TTGCGGCTCAAATCCGCAAAGTACGCCGCGCATTCTT 1767317 37 100.0 37 ..................................... TTTCCTAGAGGCTATTTCTGTGGATATGTGGGTAGAC 1767391 37 100.0 36 ..................................... AATATGTTGCTTGCCATCAAGAAGTACCAGCAAACA 1767464 37 100.0 38 ..................................... TGAAGAGATGGAGCAGTGGGAGCAGCGAGCGCGTGGCC 1767539 37 100.0 36 ..................................... TATTAATGTACGGATGTCAGTACAGGGGGGTAACAC 1767612 37 100.0 37 ..................................... CGTACTGAACACGGACTACTCTAGCGAGGATTACAAC 1767686 37 100.0 35 ..................................... AATGATAACGAGCGGGCCGGGTTCGGGCGCCGGGA 1767758 37 100.0 37 ..................................... ATCGAGACTGACCCAACCACAGATCGTGCCCGATGGG 1767832 37 100.0 35 ..................................... CCATCAATCGTCAATCCCGAATAAAATTTCTGGAT 1767904 37 100.0 37 ..................................... ATCAAACTGCCCAGCTGGACAAGGATAAGTTAATGCA 1767978 37 100.0 35 ..................................... TCATTAAACAGCATTCAGGCCGGCGCGATGTACCG 1768050 37 100.0 35 ..................................... GGAACGCAATCGCGCCAATCGCGCGAAGAGTGCCA 1768122 37 100.0 36 ..................................... AGATGATCGGTATTGGGGGGCTGGTTCCTTTCCTGA 1768195 37 100.0 37 ..................................... TTCAGACTCAAGGTGCTCTCTTGGGTGTCGGCTCTGT 1768269 37 100.0 36 ..................................... AAAACGCGCCGCGATGGCTTGCGACGCATCCGATTG 1768342 37 100.0 37 ..................................... ATTGAAGGCATTACCGCCTACATTGGAGAGCAACGGC 1768416 37 100.0 35 ..................................... AGACTGGTCAGACAATCCAGATGATGACCAGTTTA 1768488 37 100.0 36 ..................................... CCCATCCCAGAAGTACAACCGGGCGCAGGCGCTGGC 1768561 37 100.0 36 ..................................... ACTACGATCCGGAGGAAGAAGCCAAGCAAGAACATA 1768634 37 100.0 36 ..................................... ACTACGATCCGGAGGAAGAAGCCAAGCAAGAACATA 1768707 37 100.0 36 ..................................... CTTCACCGGGCCCAGGTGGACTTGGCGGTGCTCTGC 1768780 37 100.0 35 ..................................... TCACACTATGTCTATTCACAACGCCCGCTCTAGTC 1768852 37 100.0 36 ..................................... GCTCGTTGAGCCTGCCAGTGAGTCGCTTGACTCTGA 1768925 37 97.3 35 .................................C... ATGGCTGGGTGTGATCCCGATGATCATCAGGTGCG 1768997 36 78.4 0 ACC.......T....-TG......C............ | C [1769006] ========== ====== ====== ====== ===================================== ======================================== ================== 39 37 99.4 36 GTTGCAGAGGGAAGAGCATCCCGGTAGGGATTGAAAC # Left flank : CCGTCTCATGTCGAGGGCTACTTGAATCATCATCTAACTCATCCCAGGATAATTGGGGCGCATCATTAGCTTCCATCATAGACCTCCTGATTACAAGTGGGCACATATGTTATAGATGAGATTATAGAACGCTGATGTGTGATAGGTAAGATTTTGTAGTATAAAGTACCATTGACATAACAAAAGGAATGAATAATTGCTATCTGGCTCAACCTCATAATATGCTTTTTCATAAGCAGATGTAAAAGCCGGTGTGTAAAATGGCATTCTGTTCCTGCCAACAAATGTCGCGAGGCACGCAGCGGTGAAAATGCTGAGCTCGCTGCCTCGCAACATCAAAGGAATGCTACCAACGGGCTCCACAAGCTCTTGTAAAGGACAAAGAACTCGTGTATAGTGTATCTGTGAATGATGAAAAACGCCTTGCGAAACATATATTTCATCGCTGCCTCGCAAAAGCTCTCCTCGCCCCGCTTTCCAGGCGTCTCGAGGCAAACGCG # Right flank : CTTGCTGCGATCGACGTTTCAGGGATGTGCCGTCTAATTTGCAGAGGTGCAGACGTTCCGGTAGAAGGTGAATAGTTTTCTGAGGCTTTTATACTGTGATATCGAGAGAGGTAGGCTATCTTCACAACCATAATAGAAGATAGCCCCATTAATTATTTGAGGAGAAATGAGGGGGCATAACCAGGTTGCTGATCTTCCATGATTTGAATTTCTGCATGAATGGCGTTGAGTTTGTGTCCAATGAAACAGGCTCCGCTGTAGGGACCTTGATAAAACAGCAATAGTTTTTTTGCTTCCCAGTGCTGGATAAGTGATTTAGCGTATGATTTTACTTGTTCAGCTATTGCTACAACGGTATGTGCATCCTCTATTTTGCGATTCAAGTCTTCTGTAGATAAAAGTAAGAGAGCTGCTATCTTCCCTTTCCTTTGAGCCAGGTATTTTTTGACATCATTATCTAAGGGAATTGAACCATAGGCACTGATTCCAAGAGCGACTGT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:0, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAGAGGGAAGAGCATCCCGGTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [11,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.90,-6.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0.27 Confidence: HIGH] # Array family : NA // Array 3 1781914-1783781 **** Predicted by CRISPRDetect 2.4 *** >NZ_BIFQ01000002.1 Dictyobacter aurantiacus strain S27 sequence2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 1781914 37 100.0 35 ..................................... AAGCATCTCTTTATCACGCAAGAGGATGAAGAGAA 1781986 37 100.0 36 ..................................... TTAGGCACGATTTTTAGCGGCGCAAATCAGATAGAC 1782059 37 100.0 38 ..................................... GTGAATAACTGCTCCTGAATGGGGAAGCCCTTCATCAT 1782134 37 100.0 35 ..................................... ACAGAATTGTCGGGGGAAAGGCCAGATGGAGCCAA 1782206 37 100.0 35 ..................................... CTCAAAAGAGGATGAGGTGGTTATAGATCCATTTC 1782278 37 100.0 36 ..................................... AAAGCAGTATCGAATTGAGGCACATGCGTCTTATAG 1782351 37 100.0 36 ..................................... TCTCCGTCGATCCTTGCGTAGCGCCTAAATGATTGC 1782424 37 100.0 37 ..................................... AATGACTTGGATCATCATACGGGTATGGAGAATCGTC 1782498 37 100.0 37 ..................................... CTATCAACTGGCAACACGCAAGGCGTACACCGCCGAT 1782572 37 100.0 36 ..................................... TCGGGCATCAAGGACCGCATAGAGTCAGCCATCGAT 1782645 37 100.0 36 ..................................... GGAGCTGGTCGAGCAGGAGGAACGCCAACCAGGTGA 1782718 37 100.0 37 ..................................... GATGCTAAATCCTCAATGCTACGCTCTCTCTCGCGTC 1782792 37 100.0 36 ..................................... AACTCGACAAATCAACTCTGCCACGGCATCTTTAAC 1782865 37 100.0 36 ..................................... TTTGTTTTTCTTTGTCACCGTTGCTCCTATGTCACC 1782938 37 100.0 35 ..................................... ATTTTGACATCGAACGCCAGAGGCCAATAATTTTT 1783010 37 100.0 35 ..................................... ACCATCTGATCTTGGCAAAAGTAGCGGGGGCGTAG 1783082 37 100.0 40 ..................................... TGCTATCCGAGCTCCAGCACCATCACTACGGCACGTACAC 1783159 37 100.0 36 ..................................... TACCAAACAGACCGTGAGAACATGGAATGCTTTTTG 1783232 37 100.0 36 ..................................... TTCGAGATATGCGTCCCCCCGCGATTAAATGCCGTA 1783305 37 100.0 36 ..................................... TTTGAAATCTCGCTATGCCATTTAGAGGCACGTGCG 1783378 37 100.0 37 ..................................... TCTCTTTCTGACTGTTTGTCATGGGGAACAGCTCTCT 1783452 37 100.0 36 ..................................... GATGAAGCGTGCTGTGTCCCATGCGAATGAAAGACC 1783525 37 100.0 36 ..................................... TGCGTCTCTTCTTCATTGGTCGAGCGGGTAAAGGGT 1783598 37 100.0 36 ..................................... ATGACATCAATTGAGGCTAATGCTGGGAGCATAACA 1783671 37 78.4 37 .........A..C...T..T..AG...........GT CCTAATGTGCCACTGAATCTGGATATACTGAGGGTGT 1783745 37 67.6 0 A.T.......GAAG..G..T..A....A.....G..T | ========== ====== ====== ====== ===================================== ======================================== ================== 26 37 97.9 36 GTCGCAGAGGAGTTAGCATCCCGATAGGGATTGAAAC # Left flank : ATTCAAGAGGATGGTCTGGTCATTGAAGACTATGATCTCATGCCACACAGTGTTCGCTTTGTCAATCACCCTCAACGAGGATTTGTCGGTCGTTGTACTTATCGCTTCCGAGGGAATACTCTAGCCATAGGCTCATCATCCTTAAATATCCAACAACAAATTCTCTTACTCGCCAGACTTGCCTTCTATACTGGAGTGGGTTATAAACCAGCGATGGGTATGGGTCAATGTCGCTATCTAGTCAACTCGTTCTAAATGAAAAATTGTTGGCGCTATGAAAAACATCTTTGCGAGGCACGCAGTGGTGAAAATGCTAAGCTCGCTGCCTCGCAAAAAGCAGATAAGTTCTTCAATAGGCTTCTCAAGCCCTTGTAAAGGACAACTAACTCGTGTATAGTCTCTTTATGAGCAGCAAAAATTACTGTGTGAAACTTGGATTGTACCGCTGCCTCGCAAAAACTATTTTTTGCCCGCTTTCCAGGCGCAGCGAGGCAGCCGCA # Right flank : TATGTGAGAAATATGGATATAAGGAGTATCTATAACAGTCGCAACTAATCTAAACAAGCGGGAAGCTTGTAACATTGAAAATTAGTCATATTAAGATCAGTTAGCCTGGCTGTTTTCTCTTCCTTATTAGCACTGTTTGATTTGGAATTTCTATTAATCTCTTCATGGGTAACAGTTGTATTTTTATTGAGCATGGTTTTCTTTGAGCATTAAAGAAACATCGTATTCGTCTTCATAAATCAATGGAACATTATTTTGTACGCATTTTTGAAATGCTGTAACCTCCTCCTGGGAAAGGAGCATGTAGCGTCCACGGCTGACTCGTTTGAATAAGGGTTTGGTGATCCAATAAGCGTTTTTTTGGTATCGCTTTCTTACATCTGAGAAGCGTGAACGCATATTGATGCAATGATAATTTACCGTTGCATCGAAGCTGGCATGGGTAGATCCTTTGCTGATGCCAGGGTTAGAATTCATATATTCATCGTATAAGTTTGCTA # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:0, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCAGAGGAGTTAGCATCCCGATAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [11,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.90,-6.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-20] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [41.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0.27 Confidence: HIGH] # Array family : NA // Array 4 1788032-1789823 **** Predicted by CRISPRDetect 2.4 *** >NZ_BIFQ01000002.1 Dictyobacter aurantiacus strain S27 sequence2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 1788032 37 100.0 37 ..................................... GTGTGTGTGCGTGTGTGTGGAGGGTTGTAGTACCTCC 1788106 37 100.0 35 ..................................... TGTCAAACGGATGCGCGCCCATATTGATGAGCCAC 1788178 37 100.0 35 ..................................... ATCACGCTCACACTCACCCAGGCATCGGGCTTTTT 1788250 37 100.0 37 ..................................... AAGAGCATTTTACGGGCCATGTGGTCCGCAGGAATTG 1788324 37 100.0 37 ..................................... TTTCTGCTACCAGCGCCATCGATGCGCCATCCTCCAG 1788398 37 100.0 35 ..................................... TGGGCGATCATGGCCAGCAGCAGTATCATGGCTAC 1788470 37 100.0 36 ..................................... GCGTTGAACACCGGGTTCACCCTGGGAAAGGTAGAA 1788543 37 100.0 36 ..................................... GCGTTGAACACCGGGTTCACCCTGGGAAAGGTAGAA 1788616 37 100.0 36 ..................................... CGATAGATGAAGTTGCAATTTATAACTATGCACTAA 1788689 37 100.0 37 ..................................... GCCGATGCAGTACGGTGGGGCGCACGCCTGATTATGT 1788763 37 100.0 37 ..................................... CGCTTCATTGCTTCTGTCGGGATATTCGATAGTTTGG 1788837 37 100.0 38 ..................................... GAAAGAGGCAGTAGGCGAGCAAACCGATCGCGTTCATC 1788912 37 100.0 37 ..................................... GTCAAGCTTATGTTTCCACTGATGATATTGAGTCCGG 1788986 37 100.0 36 ..................................... TCCTTCTGGCGTTTTGGGGCTCAGGATTCCTCGGGC 1789059 37 100.0 38 ..................................... TTCATTCCGGGTGTCTCCTCTCCCATCGGTCTGCGTAT 1789134 37 94.6 35 ...........TA........................ ACTTATCATAGTCCCTTACTCCGTGTAGTGGCTGC 1789206 37 97.3 35 ............A........................ GATGCAAATGGAAAAGCAGTAATTAAGCTGCTTGT 1789278 37 97.3 36 ............A........................ TCGGTGTGACAACTGATGGAGCTACAGGGGCCTCAG 1789351 37 97.3 36 ............A........................ GTCGGTCACCTCGCGAGCGATCGTTTCCGTCTCATG 1789424 37 100.0 35 ..................................... TCAAAACTGCAATACTTAACCAACTCCACCGTTCC 1789496 37 97.3 36 ............A........................ ATTAACAAGCTGGCCAGTGAGAATAAACTACGCAAG 1789569 37 97.3 35 ............A........................ ATTTTATGTATGATCCAAACGCGTGCGACTACGAT 1789641 37 97.3 36 ............A........................ AGGCATCAGCATATGGGATAGACAAAGATGTGGTAC 1789714 37 97.3 36 ............A........................ TCATCAGTAATATGCTCGCCCAGTGGTCGGCGCGTG 1789787 37 97.3 0 ............A........................ | ========== ====== ====== ====== ===================================== ====================================== ================== 25 37 98.9 36 GCTGCAGAGGGGTAAGTATCTCGGTAGAGATTGAAAC # Left flank : TCCTGGGAACAACACAACAATACCATAAAATTGCTCCCAATCCATTTATCATTATCGGCTTATTTGTGCCTCCCAAACCTCATAATAGTGTTCTGGAAAACATCCCATCGAGCACACTGCGAACGGATGGAATACAGCAACAGCGTCTGTTTGACTAACTCATGACATTGGTTTGCATTTTGAGTTTGATCAAGGTGGGTGGCAAATCAATGCTGTCCATAGGCTAACATGACTAACTGATTGTTCAATACAATAATACAGAGGTATGTATTCTGATAAAAGCATTGTTGCGAGGCACGCAGCGGTGAAAATGCTGATCTCGCTGCCTCGCAACAATGCGCTGTAGCTCTAAAATGGCTTCTCAGGCTCTTGTAAACAGAGTCATTCTCATGTATAGTTGATATATTGGAGGCATATGAAGTACCCTGATGGCACGAAATACGTCGTGCCTCGCAAAACACTGATTCTGCCTTCTCCTCAGGCGGCACGAAGCAGCCGCC # Right flank : CTCACCATCAATAGTGGCCTGTGCTCAGGCGTCTGAGAGGGCCGCGTGCCCTTGCATGACGCTGCCGTCGGTGAGAAAATTGGCGGTACTGCCATGATACCAGCAGCCAACAGGAGTTCGCTGCTCTTGGTGACAAGTTGAAGATGAACTTGATGGTTTCGTCATACCAGTGCAGGGTCGCAAATGCGTGCAGTCGAGAAGTGTTTTGTGTGCTCATTTCGTGTACCGTTCTATGCTATTTTTGTGGCGTTTTAGAAGCCTTTTGATGCCTAAACGCTGTTTTTGAAATTGGCTGTCAAGTTGGCTGTAATACGGTACACAGCACTTTTGAGAATGCCTCCTGAACCCTCTTCTCAGGCTCCTTTATTGGGTACCCTTTCGGCCCCCTGTTTGATACCAGTCTTACCAATCTCACTTCAACGGAGGGAACACAGAGGATGTCTTTTCTGGGATTTCAAGCTCAAACGTGCATGCGTACCGGCGCACCATGATACGTCTTC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:0, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTGCAGAGGGGTAAGTATCTCGGTAGAGATTGAAAC # Alternate repeat : GCTGCAGAGGGGAAAGTATCTCGGTAGAGATTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.70,-4.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : NA // Array 1 3569043-3569446 **** Predicted by CRISPRDetect 2.4 *** >NZ_BIFQ01000001.1 Dictyobacter aurantiacus strain S27 sequence1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 3569043 37 97.3 36 ..................G.................. TTTTGCTACTCTAAATGCCTAAAACCTTCATCTACA 3569116 37 100.0 38 ..................................... AGCTTATCAGTTCCCGCAGCGTTGCGAAGATCCTGTAG 3569191 37 89.2 36 ...C......C............A............T TTGCCATCAAACTCCAAGGTACCTGAGCCAGCACAG 3569264 37 91.9 36 ...C......C.............C............ CCTCAAAGGTTGGAGTAGCTCCCTGCAGGATACTGT 3569337 37 91.9 36 ...A................T...C............ TGGGGAAGCATTTTGACGCTAAGCGGGTATTCAATG 3569410 37 94.6 0 ..................G.....G............ | ========== ====== ====== ====== ===================================== ====================================== ================== 6 37 94.1 37 GGCTAAAAGGTCAGAGGAACCCGTAAGGGATTGAAAC # Left flank : TGACGATCCAAAAAACATAGAGATAGTGGGTTTATAAACCTACCACTTGTAAACCATACGTTTTTGGTTCCACTATTGTCAAGCTCTCTTAGCCACTACAATGCAATCATCCTACAGAAAACAGAGAGTCAACATGATCCACTTGAAAATTAAGGAAGTCGCACAGGCCAAAGGGATAAGCCAGAGGAAGCTATCTCTAAAATCAGAGGTGGACATCAAAACCATACAGAAAATCTATAGATACCCTAACAGCATAGTGACTACAGAGACGCTCGATAAAATTGCCAAAGTCCTAGAGGTGGACGCATCGGAACTCATCAAAAGCGTTCCTGATCCAGAATAAGAATGGAGTCACTTCTATTTCTTGCTCAAGCTCAGTCGCGAGGGAAACAATACTCACATCAAAGAGCGCTTGAAAATCGAAAAAAACACCTTCAAAAACGCGTTCCTCGCAAACCCTTGTATAAACACGCTTCACAGGCTATACTAGAAGTGCCGCA # Right flank : CGCTTTGTGTTCGTGGTGGACTTCAAAGCACACAAAATGAGAAACACTTGATCGTGATGATCGAGTGTTTTTTGCTTTCTATGGAAATTGGAGAAAAATAAAGAAGTATAGCAGATATGCAGGGTTAAAATTGTGTCAATCCGCCTGTAAAGCCAGTTCATATATGCTTATTCCGCGTTAGTATAGCATATATTTCCTAAAGTTTCATGAAGATGAGATAAAAGTAAGATGTTACAAGGACCATCGGGAAAAAAGGCCACTATCTTGCATGCAAATGTAAACTTTTGCTTTATGCGATTAATCCTATCAGGGGTAACTATTCAGGTGATGCCTACGGCATCAATGTTCTTTCTTGTGTTGGTGCAGAACATGGTCGGTTTAGCCGACCATGTTCTGCACCAACACAAGAACAATTTTGCTCTGCGCAGCAGAGCCCAGGCCTTTGAGCGCGAAGGAGTGCTGAATAGTTACTAGCAGGGTGTATATTAATCTGTAATGTA # Questionable array : NO Score: 3.87 # Score Detail : 1:0, 2:0, 3:3, 4:0.70, 5:-1.5, 6:0.25, 7:0.01, 8:1, 9:0.41, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCTAAAAGGTCAGAGGAACCCGTAAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.40,-3.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : NA // Array 2 4207486-4211849 **** Predicted by CRISPRDetect 2.4 *** >NZ_BIFQ01000001.1 Dictyobacter aurantiacus strain S27 sequence1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 4207486 37 100.0 34 ..................................... AAAAATGGGCCTCATCAAACGATTCAGGGAGGGC 4207557 37 100.0 35 ..................................... AAGAGGGCATGAGGCTGGTACCTAGTGCTGCAGCA 4207629 37 100.0 33 ..................................... GAACCACCAGCAGCAGCTGCCAGCCCTGCCAGT 4207699 37 100.0 37 ..................................... ATAATAGCCATGGCTGCAATCCCTATGCACATCTAAT 4207773 37 100.0 34 ..................................... AATATTGCGATGTTTACGCAAGCTGCTCATACGG 4207844 37 100.0 37 ..................................... TCATCGAGGAAAAAAACAGCGGCAGAATTGGCGCAAG 4207918 37 100.0 35 ..................................... ACTGGCAGTAGCAGCAGAAAGAACACCCCCAAAAT 4207990 37 100.0 35 ..................................... AATGTATCTATCTAAAGCCTCTGCTCTAAAACGCC 4208062 37 100.0 35 ..................................... CCGCGGTATGTCCACGATCGCATGGTGACCGTGCG 4208134 37 100.0 35 ..................................... ATGATGACGATCCCATGCGCCGAGCTGCCGCTTGT 4208206 37 100.0 37 ..................................... TGATCAAAGGTTGATGTTATATCACGAGCATTGGTGC 4208280 37 100.0 35 ..................................... ACCTCTAGTGTGTAGTATTCCTTCTGTGGCATCTC 4208352 37 100.0 34 ..................................... ACGCTTTGCAGCGGATTGTAGGAGCCGCCGCCAT 4208423 37 100.0 34 ..................................... GCCATATCCAGATCAAAGAGCAGATCCACATCGG 4208494 37 100.0 34 ..................................... ACATCGGTCGTTGGTGGCACGAGCACACGCTGCC 4208565 37 100.0 37 ..................................... TCGGTCCACGACGCCATGGGCGCGGCGGTCTATAGCC 4208639 37 100.0 35 ..................................... ATGGATGGACTGGCACCCTGGGAGTATCGCTCGTT 4208711 37 100.0 37 ..................................... CTAAATATTGCCGAACTGGGCGCGGATCTGATCCCCG 4208785 37 100.0 37 ..................................... TGGATAAAGCAGCTCGTGACAAGAGCGCAGGCGGCAT 4208859 37 100.0 37 ..................................... TCGGTGAAGGTGATCACGTCGCCGCGGTGGTAGTCCC 4208933 37 100.0 34 ..................................... ATACGCGGCCAGCAGTAACACCTGATGTAGTCCC 4209004 37 100.0 34 ..................................... TCTGACCCCAATGTGCAGGACTTAGGGCTCATCT 4209075 37 100.0 35 ..................................... TTTGCCTGCCTCGTAGTAGAAGACGCGGCCCGTAT 4209147 37 100.0 36 ..................................... ATCCATTCGACCGGTCAAGGTAAAAGTGGCGTTGGA 4209220 37 100.0 37 ..................................... ATTGGCCAGGATCCACTGCTTAATCCTATCTCTCCCA 4209294 37 100.0 34 ..................................... TCCTTAAGCCATTGCTTTACAACTGCCTGGTCAT 4209365 37 100.0 35 ..................................... CAATGGTGTTTCACGTGTTGGCTCATGTTACCGGC 4209437 37 100.0 33 ..................................... AGCGTGGATGTCTCCTATGACGGCGGCACCACC 4209507 37 100.0 36 ..................................... CACTGGATCAGGCTGTTGCCAACAGTACCCAGGCTG 4209580 37 100.0 35 ..................................... TGATGGTACGAACGCTCGTGATATAACATCAACCT 4209652 37 100.0 36 ..................................... TTGACAAATCGCAGTTGTTGCCGAAATCCGGCGCTC 4209725 37 100.0 36 ..................................... ACCTTGAGCCTGTTGGGATTGAAGTTGACAAGTCAG 4209798 37 100.0 35 ..................................... AATATTTCCACATTTATACTGTTGCAGCAGGCGAT 4209870 37 100.0 35 ..................................... GTTCTGAGTGCCTCTAAGATCTCATTATCATGCTT 4209942 37 100.0 35 ..................................... ACTGGAGAGAAACCAGGAAGAAACCAGTCCGAAAA 4210014 37 100.0 34 ..................................... ATCCATGCCAGGCTCCCAGTGGCGCAGATTACGG 4210085 37 100.0 34 ..................................... ATTGCTGCGCTCATGACGTTGCCAACACTGGGAG 4210156 37 100.0 34 ..................................... ATGCGCCATGCGGTGCCAGGCTTCCAGTCTCGGC 4210227 37 100.0 36 ..................................... TTCCAGGCGTTCGGCATCAGCAACAATCAAACGGGC 4210300 37 100.0 36 ..................................... TCGGCATAGTGCTGTTTTCCTCCTATCAAAAAACTG 4210373 37 100.0 36 ..................................... TCGGCAGGAAGGATACTAGCATGGCAAAGAAAGACA 4210446 37 100.0 35 ..................................... ATGGTCAGGTAGGACTCAGCAGGCCGGGTGTCCAT 4210518 37 100.0 33 ..................................... CTGGGACAACGTGGACCACGACCATCGCCAACT 4210588 37 100.0 33 ..................................... CCATTTATGTTAAGCATCTCGATGTTCCGCTAT 4210658 37 100.0 34 ..................................... ATGTAACCTATACCTTCATACAACGGCAACCAGA 4210729 37 100.0 37 ..................................... ATGCATGAAAAGAGGATGAATGAACACACCACCTAAT 4210803 37 100.0 34 ..................................... TTGTTGGCTGCACTAACAGACCATATGTGCCGTA 4210874 37 100.0 38 ..................................... ACTCCCACCAACCACGCCGGCGTGGACCTTGCGTGGTT 4210949 37 100.0 33 ..................................... AATCACATCTTTGGCACACCCGGCCGCGGCGAT 4211019 37 100.0 34 ..................................... AAGAGGAATGGGTAATTGACGACCAAAAAGGGAC 4211090 37 100.0 37 ..................................... ATGTAGAGCACGACGCCGGTGCCTTCTGGAGAGTCCA 4211164 37 100.0 37 ..................................... ACGTGGGGCGCAGAATGCAGTGCTGGCAGGTACCAGC 4211238 37 100.0 37 ..................................... AGGATGTGCAGAACGAATGAGCTGGGTAGCGGTGCAA 4211312 37 100.0 37 ..................................... ATGTAGAGCACGACGCCGGTGCCTTCTGGAGAGTCCA 4211386 37 100.0 37 ..................................... ACGTGGGGCGCAGAATGCAGTGCTGGCAGGTACCAGC 4211460 37 100.0 37 ..................................... AGGATGTGCAGAACGAATGAGCTGGGTAGCGGTGCAA 4211534 37 100.0 33 ..................................... TTAGTGGGCATATTGTATCTCCGGAGGAACAAG 4211604 37 97.3 32 A.................................... AGGATTGTGTTAAGAAGATGAAAGTCAATCTA 4211673 37 100.0 33 ..................................... ACCTGGCTCTCCTGACGCAGGCGATTGATATAA 4211743 37 100.0 33 ..................................... ACCTGGCTCTCCTGACGCAGGCGATTGATATAA 4211813 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ====================================== ================== 61 37 100.0 35 GATGCACCCAGCCTCGCGGTTGGGTGAGGATTGAAAC # Left flank : ATATTAGTAGCATATGATGTTTGTACTGAAACGAACGAAGGCAAACGTAGGCTTCGCAAAGTGGCTGAAGCTTGTCTCGCCTATGGGCAACGAGTTCAGAAATCGGTATTTGAATGCTCATTAAACGAGATGCAACTTGAACAGTTGAAACAGCGTTTGCTTCAAGTTATGAGCGAAACAGAGGATAGCCTGCGTATCTACCGTATGACGCAAGTACGTTCTCGTTATCTCTGGACATTTGGTAATCAACACGATGTTGATTATAATGCGCCACTCATTTACTAATATGCGCGAACCAGATCTGCTGAATCAACAAGCACGAGGTTCGCGCATACAGCTAAAGATATGCTGAATGCCCATCCCAAGCTGGTAGAGGCGAATATGAGAAAGGGACCTACAGAAAGGCGGGCACAAAAACTTGTGTGTTGAGGTAATGACAAATGAGGTCCGCGCAAATAGGCGAGTCAACACAGGCAGAGCCTATGTTGAAAGCGTGAGCG # Right flank : CACGATGGGGGTAAATAGTGCCCTGGATACCCTGGGGTGCGGCAAGCTTTTTTGCGGGGAGACCCTGACCTTTTCCTATCGGCCTCGAGGGTGGCTCATGATCGGTTTTTCCGACCCCCTCGTTGTTGTTCTCGTAACGCTTTGAGCCTTGCTTTTTGCTCATCCGTGCCTCTCTGACGCATGGCGTTGTATTCCTGGAAGAGCCTAGCCTCATCAGGAGCCTCCTGTAGCATCCGCTCCATGCCTCCGCCTTTTGACCCTCTGAAGTTACGGTCGTACAGGCGGGTAGCTTCCAGGTGTTCTGGCGTCGGCTGCATATTCTCAATATTTATCGATGGAGCCGATGACCCACCTTGTTGTTCTTGTAACGTTTTGAACGCTGTTTTTTGCCAATCCGCGCCTCTATAACGTATGGCGTTGTATTCCTGGAAGAGCCTAGCCTCATCAGGAGCCTCCTGCAGCATCCGCTCCATGCCTCCTGCCCCTTGGAAGTTACGGTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATGCACCCAGCCTCGCGGTTGGGTGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.40,-9.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : NA // Array 3 4216140-4216322 **** Predicted by CRISPRDetect 2.4 *** >NZ_BIFQ01000001.1 Dictyobacter aurantiacus strain S27 sequence1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 4216140 37 100.0 35 ..................................... ACGTAGTCATTGTGTGCGAGGGTGTGAAGCTGGTC 4216212 37 100.0 37 ..................................... CCGGAATGCACACCAGCACTGGATACCCGTACTTCAG 4216286 37 97.3 0 ......................A.............. | ========== ====== ====== ====== ===================================== ===================================== ================== 3 37 99.1 36 GATGCACCCAGCCTCGCGGTTGGGTGAGGATTGAAAC # Left flank : GAGGGACTTCGTGCGGCGGCCAGGAAACGCGCGGAGACGCTGGGCGCCGAGGGACTTCGTGCGGCGGCCAGGAAACGCGCGGAGACGCTGGGCGCCGAGGGACTTCGTGCGGCGGCCAGGAAACGCCTGGAGACTCAGGGCGCCGAGGGACTTCGTGCGGCGGCCAGGAAAGCCAAGGACACGCTGGGCCCCGAGGGACGCAGTGAGGCGGCCAGGAAACGCGCGGAGACTTAGGGCGCCGAGGGACTTCGTGCGGCGGCCAGGAAAGGCTGGGAGACGCTGGGCCCCGAGGGACTTCGTGCGGCGGCCAGGAAAGGCTGGGAGACGAGAAGACGGAGAGATGCAGCCCAGGAAGATTGATCGTTGGTGAGCGAGTGGCAACATGCATCGTGCTATGGGGGATCGATGCGACAGCACCTTCCCCCGCAACCCTTTCATCCTTCATTGGGCTCTGCTTCAGCTCGGCGCAAAAAAGCTTGCCGCACCCGATACCCTGTCAT # Right flank : CATTATGTAAGGCAGGGAGCTTACAACTTTGTAAGCTCCCTTTTATGTGCTTTTGGAGAATAATTGTGAAGAAATTCGTGCGATGGTGAAACCATATGAAGGTGGTCTTTTACAGCAAAAGAACACTTGCAGGGAGATATGTATGGAATTGAATGTTGACATCCAAGGCATTCGAACGCTTATTGATCAGGAAGCCGTCCGTGGATCCGTAAAGAATGTCGATGATTTACATTGCCGACTTTCTTATCGTTCTGGTATTGAATCTCAGCTTGAGTGTGTAGAGTCAGAAATCCGAAAACTTCGTAGAGCGGCGCAGCAACTGCCCAAGCTCCCCCCGTTGAGCATCGTACGCTGGGCGCAAGCGGTACAGCTCATGCCCAATCTTGTTTTTCTTGAACTGGATACAACCGGACTGTATGAAGACGCGGAAATTATTCGAGCGGTCGTACTGGATAAGGATGGGGTGAGCCTCCTTGATCTGTATGCGCAACCATCGAAAC # Questionable array : NO Score: 5.31 # Score Detail : 1:0, 2:0, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATGCACCCAGCCTCGCGGTTGGGTGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.40,-9.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [45.0-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0.27 Confidence: HIGH] # Array family : NA //