Array 1 2694523-2683900 **** Predicted by CRISPRDetect 2.4 *** >NC_011026.1 Chloroherpeton thalassium ATCC 35110, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 2694522 30 100.0 36 .............................. CTGATGAAGCCGCCGGGGGAACACGGCCTCGCGGAT 2694456 30 100.0 37 .............................. TCGATTCGAGCATCGATACATTTCGCTAAAAGTGAGG 2694389 30 100.0 36 .............................. AAACAAAAACTCCCAACGAAGTAACGGTGGATAAGT 2694323 30 100.0 37 .............................. TTGGTCATCAATCAACATGCGATGTAATTAATACCTT 2694256 30 100.0 36 .............................. TTAGTGCCGGTATGGACTTAGGTCTTCCGGCAACGG 2694190 30 100.0 38 .............................. CTAATTATTTCGCCAATTTCAATAAGTTCAAATAATTG 2694122 30 100.0 35 .............................. ACTATTATGCAGGACTCTCTTTTTTTAAATCTGAG 2694057 30 100.0 36 .............................. GTGATGATGGCGCAATGGACTTCACTCCATTAAGGC 2693991 30 100.0 35 .............................. GCGACATAAGTATCACTTGCAAAGTTTGAGTCGTA 2693926 30 100.0 36 .............................. GCGATTAAGGAAAGTCGCATATCTAATTCACTCACT 2693860 30 100.0 35 .............................. AAGCATTAAAAGCAATGAGGTATAGCTGGAAAGAT 2693795 30 100.0 35 .............................. TATTTTTTTTGGAAGAAAAAAACAGGTATATACAT 2693730 30 100.0 37 .............................. ACTAAGTTTTTTTTTTGGTATGAACGGACTGTGGTGA 2693663 30 100.0 35 .............................. TTCCAATAACGGCAGAAACTTTATTTAAAAATGAG 2693598 30 100.0 37 .............................. TTTGTGAATATTGCACTCGATTCATCTTTACTTCTTT 2693531 30 100.0 36 .............................. CGAAGGTCTGAGTCTCGAAGGTCTGAGTCGAGAAGG 2693465 30 100.0 38 .............................. TTGTCTTTATCCCAAACTACCCAACAGCTACTATCGAA 2693397 30 100.0 35 .............................. TCGGATTTATATGCCAAGTCGGTAGAGCGGATGAC 2693332 30 100.0 36 .............................. CGTCATCACCGACGATACTGACAAACCCTATGTTTT 2693266 30 100.0 35 .............................. GAAATATCTTTAAGTCCGACGGCTGTATTAATCCT 2693201 30 100.0 37 .............................. GATGTCTTGTGTTCCACAAGTCCCATTTCCAGGACAA 2693134 30 100.0 37 .............................. GTCGGTACGGCTTATAACTTTACGAACGCAGAAGATA 2693067 30 100.0 36 .............................. ATTGACAAAGAATCAATATGTTCCTCATCAATCTTT 2693001 30 100.0 37 .............................. TTTGTTTTGTTTGTTGGTGTAGTCGTTATTGACTACA 2692934 30 100.0 36 .............................. TACCCACATTCGCACGGCTTTGCATAGCGCCCTGCG 2692868 30 100.0 36 .............................. GTATTTGAGGCGGTTTCGGGAAGTAATACGGTTCAT 2692802 30 100.0 36 .............................. TACCCACATTCGCACGGCTTTGCATAGCGCCCTGCG 2692736 30 100.0 36 .............................. GTATTTGAGGCGGTTTCGGGAAGTAATACGGTTCAT 2692670 30 100.0 36 .............................. GGGAAGCAAAACGTTGGCAGGTTCAGACTGACGAAG 2692604 30 100.0 36 .............................. GTAAGAGATATGTTAGGGCTGAAGTGGCGTTTGGTG 2692538 30 100.0 35 .............................. TTAAACCTCCAGAGACGGATGGATTCGCCGTGTTT 2692473 30 100.0 36 .............................. TCGCGAGGCAAACATTTGCAGAGCAAAACTTGAATG 2692407 30 100.0 36 .............................. AAACGAAAATTCTCTTTTCTTTCATAAAGTCATTTT 2692341 30 100.0 36 .............................. CTTGTTATCAACACAGTTATCAACATCGCAAGTGCT 2692275 30 100.0 36 .............................. TATTTTTCAACCTGCTCCCGATTCTTGATCTATTTT 2692209 30 100.0 36 .............................. CTGTCTACAACAACAACAAAGAACACTACAAAAAAT 2692143 30 100.0 36 .............................. GAAAAATGCTTGAAAATGCCACAGAATCCCCAGCGT 2692077 30 100.0 36 .............................. CGGGCTTCTCCGCTGGTGGCTCTGGTTTCGGCTCTG 2692011 30 100.0 35 .............................. GCTCCCAAGCAGAGTCCACGCCCGCCCCAGCGCCA 2691946 30 100.0 36 .............................. GTACGATGAGCGTGTCACCATCCACGACCCGCTCGA 2691880 30 100.0 37 .............................. CAAACCCGGCCACCTTGATTGGTGCGTCCGGGTTTTT 2691813 30 100.0 35 .............................. GAAATTAAACTTACCTGAGTATAATACGCTCAGAT 2691748 30 100.0 37 .............................. GTTTCGGCTGCTGTCTTTATTGAGCTTTCTTCATCTT 2691681 30 100.0 36 .............................. ATATGCGTTTTCGCGTTCAGGCGATGCGTTAAAGCA 2691615 30 100.0 36 .............................. CGCGTATTGTCTTTGTTCCGCTCCCTACCTCTAAAA 2691549 30 100.0 37 .............................. AATCTCAGTACTAATTTTCGAGGTGCGGTTGCGGCTC 2691482 30 100.0 37 .............................. AAGATCCTCCGTAAGTATCAATTTTAACCCAGGTCTT 2691415 30 96.7 37 .........................A.... AATCTCAGTACTAATTTTCGAGGTGCGGTTGCGGCTC 2691348 30 100.0 37 .............................. AAGATCCTCCGTAAGTATCAATTTTAACCCAGGTCTT 2691281 30 100.0 37 .............................. TTGGCAAGGGCGTTGAGAATGTCAGTGGATATATCGC 2691214 30 100.0 37 .............................. GGTTCTGCTTATACTCTTTTACCCGGCGAGGAGATTG 2691147 30 100.0 37 .............................. AGCCGAGCGAAAACAAGGCGGATATTTTGCTTAGAGC 2691080 30 100.0 36 .............................. GCGGAGGGGCAAATAAATTTAAAACTTTTGACCTTA 2691014 30 100.0 37 .............................. CGCGGGCTTTTTATTCATTCTGGTGTGGGGGATACGC 2690947 30 100.0 36 .............................. TAGATTTTGATGATAAAGAATTCATTGAATTCACTG 2690881 30 100.0 36 .............................. TCAAGGCGCAAACCTTAGCGACTCAGTCCTTCAAGA 2690815 30 100.0 36 .............................. CAAGCTACCACCCTTTTTTATTTTCAAAAAGGAAGA 2690749 30 100.0 36 .............................. CTAAGGTTTGCCTCAGTGAGGTCTGCCCAGCTAAGG 2690683 30 100.0 37 .............................. TTGTATCGGTTGGGCTGCGGGTTTGGCTTTTCTAAGT 2690616 30 100.0 37 .............................. TCAGATTTTACAAAATAAACTTTCACGCTATCAATAA 2690549 30 100.0 36 .............................. AAAATTTGCAGGGGTATTGGCCGTTTTCATTTTGAG 2690483 30 100.0 36 .............................. CAGATCTCACCAAATGTTTTTCTATTTTCTTCTCGG 2690417 30 100.0 36 .............................. CTCGGCGGGCACAATTGTGAGAATACCTATTTTAGA 2690351 30 100.0 36 .............................. TGTAGATTATTATTTAGATGTTGAACTATTTCATCG 2690285 30 100.0 36 .............................. TGCGTCTGTACGTTTCTTAACGAAAAAATCCCATTA 2690219 30 100.0 36 .............................. TATGAAAGTGGAAAAAGAACGTATGGATATCCACAA 2690153 30 100.0 38 .............................. AACACATATATATACGAAATACAGGCGAGCATATAAGC 2690085 30 100.0 37 .............................. TATTTTATTTCCCCTTTTTTAAATTGCTGTTTCAGAT 2690018 30 100.0 36 .............................. ACTTCTTGACATGATTTTTATACAAAAAAATTAAAA 2689952 30 100.0 36 .............................. TTTCGATTAAAGTTTAATTGTTAGCTTGTAAAAAAA 2689886 30 100.0 37 .............................. CTCTTCAGGCAAACGGTTTATGAGGTCTCTCAATTCT 2689819 30 100.0 36 .............................. TCAGATTTTACAAAATAAACTTTCACGCTATCAATA 2689753 30 100.0 37 .............................. CAGGATCGGCTCCTCTGTATAATATCACACACACAAA 2689686 30 100.0 36 .............................. TTTGATGTGTCTTTTGATACTTTCATTTTAAATCTC 2689620 30 100.0 36 .............................. AGGCTTTCATGATTCTCGCTGTAAATAATCGAATAG 2689554 30 100.0 36 .............................. ATTACCTGAGCCGTCTTTTATTTGGAAATAAGCCTT 2689488 30 100.0 36 .............................. TGCCTTCATTCGAGCAATCTAACGCCTGCGGTTCAG 2689422 30 100.0 35 .............................. AAATAGAAAGTTGAAATCGGGAGCAGACGGAAAAA 2689357 30 100.0 35 .............................. CGAGAAGCCCGACGCGGAGCCAGCGGAGAAGCCTG 2689292 30 100.0 35 .............................. ACAAGTTAGCAGAAGCACTGAAAAGTCGATCATGG 2689227 30 100.0 37 .............................. GTGGTTCATGAAGAAATAGAGTACAAGGATAACACTG 2689160 30 100.0 37 .............................. GTGGTTCATGAAGAAATAGAGTACAAGGATAACACTG 2689093 30 100.0 35 .............................. ATTTCATACAAAAAGAAAGTTTTTCTGCCATATTT 2689028 30 100.0 36 .............................. TCGGTTCTTTATGTATTCTAAATCCAGTGCCGGGCG 2688962 30 100.0 36 .............................. TGCGAAACTTGAAGAACACCAAAACAACTCAACAGA 2688896 30 100.0 36 .............................. CAGCATGATGCTGTGGTTTATAGATTTGCAGAAAGA 2688830 30 100.0 37 .............................. TTGTATCAGATAACATAAGGGTATTAGATCAATATAA 2688763 30 100.0 36 .............................. TTATTCTGAGAAAATCAGTCATGGTTTCGCCTGTTG 2688697 30 100.0 37 .............................. TAGGCTCATTGGACAGTACCTGCCCTGATTTATTTTT 2688630 30 100.0 36 .............................. ATGTAAGTCCATCCCTCTTTCTTCATAAAGCGAATT 2688564 30 100.0 36 .............................. GACAATTAGCTCAATAACCGCACCAACGTGGGGAGC 2688498 30 100.0 36 .............................. CAGCATCATGCTGTGTACGTAATATAAACAAAAAAT 2688432 30 100.0 35 .............................. GCGGGTTCAACAACAAAACAAACAGGAAAGGAATG 2688367 30 100.0 36 .............................. TTGTATCGGTTATGCTGCGGGTTTGGCTTTTCTAAG 2688301 30 100.0 37 .............................. CCGGGACAAGCTTTGAACCTGCCGAGAGACAAATAAC 2688234 30 100.0 36 .............................. TCCGATGCGGTTTTTCTTTATAAAACCAAGTTTTTC 2688168 30 100.0 36 .............................. TCTTGAAATCGAGCGTGCTTTCATGTATGGGAATTT 2688102 30 100.0 36 .............................. ATTCAAGTTTTGCCCCACTAAGGTTTGCCTCACGAA 2688036 30 100.0 35 .............................. ACTTTTGCAGTATTAGAATAGTTTTCAATCACCCA 2687971 30 100.0 36 .............................. ATCGTTGTAGATGCAGAAAACATGATTTTGGGTGGA 2687905 30 100.0 35 .............................. GCGGGTTCAACAACAAAACAAACAGGAAAGGAATG 2687840 30 100.0 35 .............................. GATTATATTGATTTAAACGACGACATAATAGACGA 2687775 30 100.0 36 .............................. GCGGTTCAAATAAATTGAACAAAGGCGGCGTGATCC 2687709 30 100.0 37 .............................. TTTTCTATTGTTTCTTCATAGAAAGTTTCAAACACTG 2687642 30 100.0 35 .............................. CAATTTTGTTTATCTCAGTTTGTGATTTTAATCGT 2687577 30 100.0 36 .............................. GAAATTCAGGGCGACGGAACAATTGAGATCACAATG 2687511 30 100.0 36 .............................. GGGCTAAATCAAGCAGCGTGATAACTAAAGGATTTA 2687445 30 100.0 36 .............................. GAACTTTGCTGGAATGATTATTGATGCTATTACCGG 2687379 30 100.0 37 .............................. ATTTGTTCTAATACAGTTGGCTCAATTACTACTTCGA 2687312 30 100.0 37 .............................. AAGAGCCTGACAATTAGCTGAATGAAATTTTAACCCA 2687245 30 100.0 36 .............................. AAAGAGGAACAGTGTTCAGGGATGAGCCACCTACAC 2687179 30 100.0 36 .............................. TGTTTTTAAATATTACCAAGCGCGTCTTTTCTCAAA 2687113 30 100.0 37 .............................. CGCGATAAAATCGTTTTCTCTGATCTGGAAAAACACC 2687046 30 100.0 35 .............................. CCATACTGTCGTGCATAGGGGCTTTGTCGGTTACA 2686981 30 100.0 37 .............................. GCAATTGTGAATTTCACAGGCTCAAACGTCACTGCGC 2686914 30 100.0 37 .............................. TCTTCAGAATAGCCATCGAAATAAATCACTTGTTCAG 2686847 30 100.0 35 .............................. GGGTAAAAAAAGCTGAGGATTTAACTGAAGAACAG 2686782 30 100.0 34 .............................. TCGCGATGCGTTTGCAAGCGCGTTGCGAAAACTC 2686718 30 100.0 37 .............................. GATTTTACTTTAAAACTTGAATCTTCAACAACAGATT 2686651 30 100.0 37 .............................. TGAGCCGTTTTTGGGTGATACAATGTTTTGGATATGA 2686584 30 100.0 36 .............................. GCTTTTCTGCAATATCAGCGACAAATTTTGCGTACG 2686518 30 100.0 38 .............................. TGTAAAAACGAACATGGATAAAGACAATGATGAAAATA 2686450 30 100.0 34 .............................. ATCTGCCAATTTCCTTTTGCCCGGCCGGTATCGA 2686386 30 100.0 37 .............................. GTGCAAATAAAGTATTGCCGGTCAAGGCTTTTTAAGG 2686319 30 100.0 35 .............................. CTGATTGATGGCTATTCGGAAACATTTGCAGGTGG 2686254 30 100.0 35 .............................. TCAATGACAGCGCATTCAAAGTGCTTTATGACTTC 2686189 30 100.0 36 .............................. CTTGGCTCACCCTGACTTTCATAAAAGGCGTTAGCC 2686123 30 100.0 37 .............................. TGGGGTCTACATATAGCGAAAGTGATGATATTAGAGT 2686056 30 100.0 35 .............................. GTGTTATATTCGGGTTTATACGAAGAAATTGTTCG 2685991 30 100.0 36 .............................. ATAATTTTGGGCATAGCGTCTATGCGCAAAGTATTT 2685925 30 100.0 36 .............................. GCCGGCAAGAGCAAAAGCTACGATATGATTCCCACA 2685859 30 100.0 37 .............................. AGAGTATAACCTCGTGCTCTTGCACGTAATTATTGAC 2685792 30 100.0 36 .............................. CAGATATGTATTGCCCTGTCGTATCAAACACGATCA 2685726 30 100.0 37 .............................. GCAATTGTGAATTTCACAGGCTCAAACGTCACTGCGC 2685659 30 100.0 37 .............................. GCAATTGTGAATTTCACAGGCTCAAACGTCACTGCGC 2685592 30 100.0 36 .............................. TAATATTAATTCCCTTGTATTCGCCTATAAGTGTAA 2685526 30 100.0 36 .............................. TCGCGAAAGAAATATCAGCACCAATGATTGTTTCCC 2685460 30 100.0 36 .............................. TAATATAACCAACACGTAATTGCATCTTGTATTTTT 2685394 30 100.0 37 .............................. CCATTTCCCCCGATCCAAGCTCTTTAACGAGAATAGA 2685327 30 100.0 36 .............................. ATATCAACTTTGCCAGGAAGAATTACATTTCCAACA 2685261 30 100.0 36 .............................. TTGAATGTGTAATGCTCTTTTCGCCTTGTCTCATCA 2685195 30 100.0 37 .............................. AATAATACGTATTCGGCGTTAATTTTATATTCGACCC 2685128 30 100.0 36 .............................. AGAATTCTCGGTTCAACTATTACTACTGGAGCTTCC 2685062 30 100.0 38 .............................. ACCGATTACCTCGCCGTTATCCGCCGATACAAATGGTT 2684994 30 100.0 36 .............................. AAACTTTATCTGCTTCGGCGCCTATGCCCGCGCTGA 2684928 30 100.0 36 .............................. GTTCCGTTGCGGGCAAGAAGGAATACCCGATAACGG 2684862 30 100.0 37 .............................. ATTGCACCCAACCCATCGTCATCCGTACACTCGATGA 2684795 30 100.0 37 .............................. CATCAAGGTCTAAAATCTCCTGTTTGTCGTTATCGAA 2684728 30 100.0 37 .............................. TTTTTCAATCAAATTAAAATCGCATTACAAAATATAG 2684661 30 100.0 37 .............................. TTTTTCAATCAAATTAAAATCGCATTACAAAATATAG 2684594 30 100.0 37 .............................. ATATTAACTTTTTTTTGAGTTATTTCCTTCTGTTCTT 2684527 30 100.0 37 .............................. AGAAAAAAGTAAATAAAAGCTTGCATATTAATCAATA 2684460 30 100.0 36 .............................. AGAGTTTTAGTCTCTAACCTTGTCTCGATTTCTACA 2684394 30 100.0 36 .............................. ACTTTCCACCCGTTACTTTCATAAAAGTTGAAAAAT 2684328 30 96.7 36 ............T................. GACAATTCGTTAAAGTCTTCAGGAAAGTCTTCAGGG 2684262 30 100.0 37 .............................. TTGGCCTTTATGAGAGGTTCGCTCGCTCAACTAAAAC 2684195 30 100.0 36 .............................. AATCATTGTCCTGGACGATATAATCAACATCAATGT 2684129 30 100.0 38 .............................. TTTCTTTATCAAAAAACTCTTGAAGAAATACAAGAGTT 2684061 30 100.0 37 .............................. CAACACTCGCAAGGCTCTCCGCCATCAGCGGAAGCAA 2683994 30 100.0 35 .............................. ATTACAGAGACAGAAATGGAACAAGTCGCGACTAT 2683929 30 96.7 0 .............................A | ========== ====== ====== ====== ============================== ====================================== ================== 161 30 99.9 36 CATCTAATTGCACCAATGTGGAATTGAAAC # Left flank : CAGTATTTTTCTCATAAACAAGCCAATTTTAGTAGCGGAAAAGAAACAAATAACCAGATACAGGGGCTATTTGTGCGTTTTGGGCAATGCTTTTGATAACTATTAGTAAATATAAAACCAGGTTTCGCAAAAAGAAAAAGGTTTTCTTATATCTTTCTATTTTTAATGTCAAATTAAATGAGTGTTTATTAAATGGCGGGGGCGAATTTTTTTCAAAGCGGTGCTTGCTGGTTTATCAATCTTGAGCTATGTTTATATAAATTGCTTTTTTGATAAACTTAAGTTTCTGTTCTTGTCGTCAGGGGGGCGTTATTTTTGCTTATTTTGTGAATATGAAAGTGATGGATAGGGCGTAATGGTGAAAAATCGCTCAAAAAAGGCCAATTTTAAGGATCGTCGGTCCTTAGGGGTTTTTAGGTGATTGAAGGGCGACGATAATTTTAGTTGATTTTTTAGCAAAAAAGTGCTTTTTTGAATGGAAATCGCCGGTTTTTGGACGG # Right flank : ATCGGTTAGATTAACAACATCAGTGATCAAGATAGCAAAGACTTTTTGCTAACATTAAAAATGATTAGTTGTCTTGCAGAAGCTTGTTGCATTCGGCGACCCTTACATAAACAGGCAGCTTAAATGAAAATGTCGTTCCTACGCCAAGCGTGCTTTCTACGTCAAGAGTACTGTGATGCAACTCCATGATTTTCTTTGCAATGGTTAAGCCGAGTCCCGCACCGGATTTATGCTTCGATCGGACTTTGTCTCCTTGGTAAAAACGGTCAAAAATGTGTTTCAAATCTTCTGGCGCGATACCTTTGCCTGTATCTTGCACGCGAACATACATCGTGTACTCGTCCAGCATTTCAATTTCTACATCAATACAGCCATTTTCTTCTGTGTGATTGAACGCATTACCAATAAGGTTTTGCAGTACCCGATCGATAAGTCCCAAGTCGGCGAAAACGAACGGTGTGTGACTCGGGAAGTGCGCGTTTAATGAAATGTTCGATGCG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CATCTAATTGCACCAATGTGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.80,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA // Array 2 2819596-2813147 **** Predicted by CRISPRDetect 2.4 *** >NC_011026.1 Chloroherpeton thalassium ATCC 35110, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 2819595 30 100.0 35 .............................. ACAAAGTAACGGTGGATAAGTGTGTTGAAAACTTG 2819530 30 100.0 38 .............................. AAAGGTGGCAGGCTTTGAAGCAACAGCGATGATAAGAG 2819462 30 100.0 35 .............................. ACGAAGTAACGGTGGATAAGTGTGTTGATAAGTGC 2819397 30 100.0 38 .............................. AAAGGTGGCAGGCTTTGAAGCAACAGCGATGATAACAG 2819329 30 100.0 36 .............................. TTTTAATTTTCCCTTCTGCGCGTCACGCGCACGTTT 2819263 30 100.0 37 .............................. GTGGCATTGGAGCGCAGTACCTTTTTAGCAAATTCAG 2819196 30 100.0 36 .............................. AAAAGTAAATATGAAAGTAGTCACAAATAATTTTGA 2819130 30 100.0 35 .............................. GTAAAGTGAATGGGAAATGGTAGAAAATAGGAGTG 2819065 30 100.0 36 .............................. CGTGGGGAGTGGTAGCAGCAGAATAGCTTGTGCGAA 2818999 30 100.0 36 .............................. TTCTTTCACTTCTTCGTCAGTCTGAACCTGCCAACG 2818933 30 100.0 36 .............................. GTTTGCCATTTCGGTTTCTTTTCTTTCTTTTGATAT 2818867 30 100.0 36 .............................. TTTTTGCGTTCGGGATGGTTTCAACTTCGGTTTCAT 2818801 30 100.0 36 .............................. TCTATAAATATCTTTGAGTATGTATAATAACAGAGT 2818735 30 100.0 37 .............................. ATTTCTAATACATCAGCATCAGTCATATTAAGACTTT 2818668 30 100.0 37 .............................. CCAAATAGCTTAGTATCTTGTCAAAAGCATATTTAAC 2818601 30 100.0 35 .............................. GATACTCAGCCGTCGGCGCATAATCCACGCCAGCG 2818536 30 100.0 36 .............................. GACTGATTGAATGTTCCACCGTTTCTAACTCTATAC 2818470 30 100.0 35 .............................. TTGCGCTATAATATACATAACCGTCTTTTCCGATT 2818405 30 93.3 38 .......CC..................... ATAGCTGCTGTTACAGGCGTCGCCAATGTCATCTTTGC 2818337 30 96.7 37 ....C......................... AAAGGCCGGGCTGTCGCGTCTCATCACTTCATGCCCG 2818270 30 100.0 36 .............................. TTTGTTTTGTTTGTTGGTGTAGTCGTTATTGACTAC 2818204 30 100.0 38 .............................. TCGGCAATTCATCCCAATCAAGTCGACGAAAAGCTTCA 2818136 30 100.0 36 .............................. CGCGTGGCGTTTTTGTTTTGGAATGTGGCGAAATTA 2818070 30 100.0 35 .............................. CCGATTTCGTTTAGTTCGGGGGCGTAGTAGTCCGT 2818005 30 100.0 36 .............................. GTCGGCTGCACGCTTTGTTAGCCCGTTTTTGGCTTC 2817939 30 100.0 36 .............................. TTTTGCGAATTTTCATAGAGATGTATTTGTGCTCGA 2817873 30 100.0 35 .............................. CTGGTGGCTCTGCGGGCTTCTCGCGGAACAGCGGA 2817808 30 100.0 37 .............................. GAAGCAGCAGCGCTAATCATTCCGCTGTTCCGCGAGA 2817741 30 100.0 36 .............................. ACATTTTTCGCGCTGTCTACAACAACAACAAAGAAC 2817675 30 100.0 36 .............................. TTTACAGAAAGCGGTAATTCCACTTGCGAAAAAGAC 2817609 30 100.0 34 .............................. TATGAAATCTATCTTTTAAAATGGCCGGTTCCCG 2817545 30 100.0 36 .............................. ATGGACTTCACTCCATTAAGGCGTGAAAGCGTCACC 2817479 30 100.0 35 .............................. GGTGTCGGAAGTACGGCAAACATCATCTCTCCATT 2817414 30 100.0 36 .............................. CAACATAACCGGTATAATGGTTGGGTTGGCTAATCT 2817348 30 100.0 37 .............................. ACCGTTCCGGTATCTACCGAGTATTTTACATTGATGG 2817281 30 100.0 37 .............................. TTTGATAAAAAAATTATCATTGCTTCTACACCACTTA 2817214 30 100.0 37 .............................. TCTTCAATTAAAAACACATTTTTTTCAAGCTGTTTAA 2817147 30 100.0 37 .............................. GCGGGTTTTTTTATTTTTTTTTGATTACGCTAATAGT 2817080 30 100.0 36 .............................. GGAAAACTCACAAGGATTGAAGATGATATATTCCCA 2817014 30 100.0 36 .............................. GTTAGAGGTTTTACAACTTTGCAAGGTGCTATGGCT 2816948 30 100.0 36 .............................. GTCTCCGCTACTATCTGAAATCAAAAACCCTTCAGA 2816882 30 100.0 37 .............................. ATATTTATAGAATACTCAATGAGTTCTATGAAGCAAG 2816815 30 100.0 36 .............................. ATGACTGCTCATTATTTTCATCCGATTGCTCATTTT 2816749 30 100.0 36 .............................. TCATCAGCTTTTTTAATTCCTGATACGGTCTCGCGG 2816683 30 100.0 37 .............................. ATGAATGCTTTGTTTCTTTTGCATTCATAGATATTAA 2816616 30 96.7 37 .........A.................... CAGCGCTGGATATGATAGCGCGAAAAAGGAAATACGC 2816549 30 100.0 36 .............................. CCTTTTGGGAGTTCTTTAAGGAATATCTCTATGTCA 2816483 30 100.0 35 .............................. AAAATCGAGTTACTATTGTGAGTGTGGATAAGTCG 2816418 30 100.0 36 .............................. CTGCGACAGACTTTATCAAGCAAAAAATGTCTTTCA 2816352 30 100.0 35 .............................. CTCGATTTCTGAAACACCCAACCTTCCGAAACTGG 2816287 30 100.0 37 .............................. AAAACAAAAATAAACGGGAGCACTTGGAAAAACAAGG 2816220 30 100.0 36 .............................. GCGGTTCAGCGGCGGCGTAAAAACTTCGCACGGAAA 2816154 30 100.0 37 .............................. AAGTGGCAGGCTTAGCGAAGCACGGACGATAACAGCG 2816087 30 100.0 35 .............................. TTACTTCGGGAGTTTTTGTTTTGGAATGTGGCGAA 2816022 30 100.0 37 .............................. AAGTGGCAGGCTTAGCGAAGCACGGACGATAACAGCG 2815955 30 100.0 36 .............................. CGAGTTGTTTTGTTGATATGGATGAAATTCAAAACA 2815889 30 100.0 37 .............................. ACGCGGAGAAGCCAGCGGAGAAGCCCGACGCGGAGAA 2815822 30 96.7 37 .........................A.... ATAGCCTCGTACTCGTCAGGGCACACCGTGCGATCTA 2815755 30 100.0 36 .............................. CGAAGCTGCGTTTTTTTCGGGACTACGAACGAGGAA 2815689 30 100.0 35 .............................. TCTTTTCCACGGAGGCCGGTTGTTCAAAGGCTCTA 2815624 30 100.0 37 .............................. TTTAAAGTTGTTTTAGGCTCACATCGTGTAAGTTACT 2815557 30 100.0 37 .............................. CTTTTGAAAGCACGTCAGGATACAAAGAGTTGAATTT 2815490 30 100.0 36 .............................. CGCCAAACTTGGCAAATCCCGCGCAAATTATCGCTC 2815424 30 100.0 37 .............................. TGCGATGCCCGTGTTGCCAGACGTCAGTAATATTTGA 2815357 30 100.0 36 .............................. TAATTTTTATTCCAAAACGAAAATTCTCTTCTCTTT 2815291 29 96.7 36 ........................-..... CTGGCTCTGGTTTCGGCTCTGGTTTGTCTCGGAAAA 2815226 30 100.0 36 .............................. ACATTTTTCGCGCTGTCTACAACAACAACAAAGAAC 2815160 30 100.0 35 .............................. AAGCGGTGGTAAGAGCCGGTTCTATTGACCCAAGT 2815095 30 100.0 36 .............................. CTCGAATCTCGAATCGAATGGCGAATGTTTTTGATT 2815029 30 100.0 36 .............................. AAACGAAAATTCTCTTTTCTTTCATAAAGTCATTTT 2814963 30 100.0 37 .............................. CAAAGTTTTCTGTCGACTCCGGCACGAGTGGGCAAAG 2814896 30 100.0 36 .............................. TCGCGAGGCAGACCTTCAAGGCGCACACCTTCAAGG 2814830 30 100.0 37 .............................. AAAAACACTCGCACAACAAATTGCTTAATTTAGCTTG 2814763 30 100.0 36 .............................. GAAGCCGTCTTTGATTTCATATAACAGGTTGAAAAG 2814697 30 100.0 35 .............................. AAGAATGGGTTAAGAAATACATGATCGAACTTGGT 2814632 30 100.0 39 .............................. TTTTTTACAGCAGCCGAAACTGCTGTTTTTATTGAGCTT 2814563 30 100.0 38 .............................. TGATGAACGAATAGTCGTTTTCGGATACGCCGGAATCG 2814495 30 100.0 36 .............................. GTTTTTGCAGAAAAAAATTACGATTTAGATTGCACA 2814429 30 100.0 35 .............................. TCAAATAAGCCCAGATTTCGGCATCTGATAACTTG 2814364 30 100.0 36 .............................. ATTTGGATACCACTACTGAATCGCTTTCAAATAACA 2814298 30 100.0 36 .............................. CAAGGCGGCGGTGGAAATGGTAAGAATGTGTTTAGA 2814232 30 100.0 35 .............................. TAACTTATTTTTTAGCAGCAACATGAAAGTTTTAA 2814167 30 100.0 36 .............................. CTCGCACCTGATACAATTAATGCTTTATTTACAGCC 2814101 30 100.0 33 .............................. ACTTACTCCCTTGTGCGAGATATTTACTATCCA 2814038 30 100.0 36 .............................. TCTGTCTTTATACCAGATTTCGTACATATTTCGCTC 2813972 30 100.0 36 .............................. CGAATACTGTTACCTGAAATTACAGGTATTTCAACT 2813906 30 100.0 37 .............................. GATAATGACATGGCAACTGTTTTTAAATCCAAATTCC 2813839 30 100.0 34 .............................. TTCACAGACGTGATAGAGTCATTAACCACAAGTG 2813775 30 100.0 36 .............................. TTAGAAGATTGAGAAGTTGACTGAGAAGATGAATGA 2813709 30 100.0 37 .............................. GATCAGGAATTGGAAGAAGGCTGGCCGATTAAACAAA 2813642 30 100.0 37 .............................. GATTAACAGATTCTTCGTATTCATTAAGAATCGGAGG 2813575 30 100.0 37 .............................. GAAAAAACATGAATTTAATCTTTCCGTCCCTGCGCTT 2813508 30 100.0 38 .............................. ATCCAACAAGCTGTATTCAGTAACTTTCTTTTTCCAAA 2813440 30 100.0 36 .............................. AAGTCCGGTATCCGGCAAGGCCAAGCAGGCCGAGAA 2813374 30 100.0 36 .............................. GTTAGAGGTTTTACAACTTTGCAAGGTGCTATGGCT 2813308 30 100.0 36 .............................. TGGGATATATCAGGTTTTAATTATTGGGAAAAAACA 2813242 30 100.0 36 .............................. TGGGATATATCAGGTTTTAATTATTGGGAAAAAACA 2813176 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 98 30 99.8 36 CATCTAATTGCACCAATGTGGAATTGAAAC # Left flank : TCACGAAGTGAAAAAATCGGATGCGATGGAGGAAGCACATTTTTGGCAAGTTCGGTACTATATTTATTTTTTAAAACAAATAGGTATAACTGGCACGCGCGGCGAGATTGACTATCCGAAACTAAAGCAGCGCAAAACGGTTTTTCTTTCTGAGCAGGATGAAAAAGAGCTGGAGCAGATAATCGCAAATATTCGACAGGTCAAGTGTTCTGAAGAAATGCCGGGAACGATTCACAAGCGCTTTTGTAGAAAGTGTGCTTACTTTGAGTTTTGCTGGACTTAGTAGGGTAGCGGTGTCGTCGGGAAAGTCTATTTCGGAGAGAAAAAAGAAGCGATGAGTCGTAGAAAAATTTGTATTTGTGGATTTTAGCGCAAAAAAGGCAGTTTTAAGCGTCGTCGTCCCTCTGTAAGTTTTCGGCTATCGAGGGGCGACGATTTTTTTGTTTGTTTTTCAGTGAAAAAGTCGCATTTTTGAAGCTAAATCGCCGTTTTTGTAACGG # Right flank : TCTAATAGAAATTCTATTGGATTTTGAACTGTCCAAAAAAACGTTCCTGAATCAGGCCTTAGGGTAGTCCCTGAGCGAAGCTTAGGCTTTATCGGCTTTTCGGGATGTCGTTAAAAAGTTAAACGTTTATTACAATGAAAAAATACGATTTTACTAATAGAGCTTTTGTGCCGGCGTTTCTTCCATTGTTCTCATGCTATGAATGTTTGGTTTTTGCCAGTTCAAGTTCCCGTGTTTTCTTAACCAGACCAAAACGGTACTTTTTCCTTGTATGCCGTAACGCTTTTGGGCTTGCTTATAGGTCATTTCCCCGTTTTCAACCTGTCTTCCATCAATAAGTCTATTTTGTGTCAACTTATTTCAGGACGGGACAACAATATCCTTGTAATTTTTTTTGATATAAGGCGCATCGACACTGTGTTTCTCATAAATTTCTTGCATGGTAAGTGTTTTACCGGCAAATGCTCACAAATCCTTATATATATGAATTTATAAATTAC # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CATCTAATTGCACCAATGTGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.80,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.87 Confidence: HIGH] # Array family : NA //