Array 1 120666-123077 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHOFT010000004.1 Bifidobacterium adolescentis strain MSK.20.2 NODE_4_length_201253_cov_431.297, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 120666 36 100.0 30 .................................... GCACGCACCAAATGGCCGCCTAAGAAAGAA 120732 36 100.0 30 .................................... TCGAACCAGATTTCCGCGTGCCCGCCATCC 120798 36 100.0 30 .................................... TAGGCGCAGTCTCAACCAATTGGAACGCGC 120864 36 100.0 30 .................................... ATGAGTGAAATTGTTGGCGGGTCGCGCGCG 120930 36 100.0 30 .................................... TCAATGCACCGATTGCAGCCATACTCTTGG 120996 36 100.0 30 .................................... TCTTTGAGAATATATTTCATTAGTGTATCT 121062 36 100.0 30 .................................... TCCGACGATGATAGGACTCTGCTTGCCGCC 121128 36 100.0 30 .................................... TCGGTCGACCTGGCTGCCGCGCACGGTGAT 121194 36 100.0 30 .................................... TAGGCTGCCGCTGACCGGAACGAATCGTTC 121260 36 100.0 30 .................................... TTGTGGGCGCCGCCGTCGTTCAGGCGAGGG 121326 36 100.0 30 .................................... TCGCCGTCGTGCAGCTCGGTATAGAGATCG 121392 36 100.0 30 .................................... AGGTCCTCACGCAGTTGCTTGGATGTGTAT 121458 36 100.0 30 .................................... TTTGCGGCCGGTGTAGATCTCTGAGTTGAG 121524 36 100.0 30 .................................... TCTTGTTCGCATTATCGCTCATGTCCTGCA 121590 36 100.0 30 .................................... CAGCCATGCGTTCCATCGGCGAGGTATGGC 121656 36 100.0 30 .................................... TACTTCTTCACTCGCAACTCGAACTTAGGC 121722 36 100.0 30 .................................... TTTGCGCGCTTTGGTTGCTAATGGCGTTCA 121788 36 100.0 30 .................................... CTCAAGGTGCGGTTGAATCATGCAACCGCG 121854 36 100.0 30 .................................... CCGTGACTTCACTTTCAAGCAAGCGTTCTT 121920 36 100.0 30 .................................... AAGCGATAGCATTGTATCCGTCCGGCAGAT 121986 36 100.0 30 .................................... CTTGCATGAGATTGTGCGTGTCCGATGGTT 122052 36 100.0 30 .................................... TCGCGTTCGGACACGGAAACCCATATGCCG 122118 36 100.0 30 .................................... GTTGACCTTGGCGCGACTTTCACGTCGATG 122184 36 100.0 30 .................................... TAAACGGGTCGGACAGCTTCGTCTTCGCAC 122250 36 100.0 30 .................................... AAGCATGTGGCCAAGATGGCCGCTTACAAG 122316 36 100.0 30 .................................... CGAATCTGCGGCAGCACCTCGTGAGTCACC 122382 36 97.2 30 ........................A........... GCCAAATGCTGCCGAGCGGGTGCAACGGCA 122448 36 100.0 30 .................................... TAGCCGTCCTTATTGAGCTTGACGAGCGCC 122514 36 100.0 30 .................................... GACTTTGCACATTTCATAGCATGTCGCACC 122580 36 100.0 30 .................................... TCTCTTTTTCCATGGTTCGAAGTGACATGT 122646 36 100.0 30 .................................... CCCAGCAGGGCCGCGAAACAGTCGCTGGCC 122712 36 100.0 30 .................................... CGGCACGCGGCAGAGTTTCAGTGTCGTGTT 122778 36 100.0 30 .................................... TATAGCGTCGTGGAATGTTCGTGCCTGAAT 122844 36 100.0 30 .................................... GCACCTCGGCTAGGTCGCGCTGCTTCAGGT 122910 36 100.0 30 .................................... GCACAGGGCCAGCGTCATCAGCCATGAGAA 122976 36 100.0 30 .................................... GTGCGGTATATGAGCGTCTCGGCTACGCAA 123042 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 37 36 99.9 30 GTGGTCTAGGTCATTGATCTGACAGGCTTCTGAAAC # Left flank : AGCGCATAGGCGTCAAGCAAGACGTCTTGGGGGACGGCGATGTTATTTTCGAGGATGTCTGCTATTAGCCAGCTCAGCGAGTAGTATGGTTCTCCTGCATTAAAGCCATCATCGAGGGATTGGACTTGGCCATCGGGAAGAGAATCGCAATAGGGTCTCAACTGTCGGTAGGCTGCCGCCACTTGCCGATCAGGGGCCATAACCTTTCCCTTTCCTGTGTGGTGGTCAGATGGCCGGTGTAAATGCGAAAACGTTTCTCTTTGCCGTGTCTTTTCTGCAACCATACGCGGATTAGTTCTTCTTCCACGATTCTATAGCGAGTTTGCCTATTCTCATCAGCCCGTTTGATGTAATCCGGATCGGCCACCCCTAAATAAAACGCCCATTTCGCTTTCATTTCATCCCAATCGTCTAGGAAATGTATATTTCCTTCGACGCGAATATCAATCCCATATCTTTCGAAAATATGATTCCGAGCCTTGAAATAGGCATAGCCGCGA # Right flank : CCGATAGCCTTGGAGCTTCCTGAACAGTTCATGAGAACTGAACATAATCTCCATCAACATAATGGCTTCTTCCTTCTGTCAGGGTAACCCTTTTGTTGCAGCATTCCAGGTCAAGAAGCTGCATACCATTTTTTAATAGGTCTCTATGTAAATAAATCAATTGGTCGTTATTACAATATTGAGTTGTATGAAGCGTCACAAGCATCCTGTTCTCAGCAAGAGCACCGGCAGTATCAACCACCATCTGAATTTTATCAAATAGGGAACCCACAGAGCTCACATCAACACGTAATTTTGCCATTGAAATCGCAGTTTTCAAATCCAGCGAAGAAGAAATTTCCAGAGGCAAATCATCATCCCATATTTCATCTTGAATAAGCGTTTTTAACTCTACCTGCAACTCAAGCACTCTAGTTAATTTATCAACATCAAATTCATCTATTATTTTCTTAATTGCCGCTTTTTGGAATAGTGCATTGTAGTCAACAATATCAGCGCAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCTAGGTCATTGATCTGACAGGCTTCTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-3.50,-3.30] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //