Array 1 91288-94195 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACHGU010000005.1 Pseudoxanthomonas broegbernensis strain DSM 12573 Ga0310475_05, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 91288 28 100.0 32 ............................ AGTCATCGAGCGGCAGGTTGCACATGCGGAAG 91348 28 100.0 32 ............................ TTTCCAGGTAGCGGTCAGCAGTCCGCGGAACG 91408 28 100.0 32 ............................ TGGGGGAACAGGTACTTCGCCGGCGGCGTGCC 91468 28 100.0 32 ............................ TGCCAGCTCGCCTTCGCCGCGTCGCTGAGGGG 91528 28 100.0 32 ............................ TCACGTACTTGCTTCGGATCACGCGCGGGCGG 91588 28 100.0 32 ............................ TGACCACCGTCGGCATCGTCGTGAAGTTCGCC 91648 28 100.0 32 ............................ TCGCTGGGGCTCAGCCGGTTGGCCTTGATGAA 91708 28 100.0 32 ............................ ACCCCTCCTCGCCAGGGATGGCGACGCCTGCT 91768 28 100.0 32 ............................ GTCCACAACTCCGGCCTGTACGTGAACGCTGC 91828 28 100.0 33 ............................ TGGTCGAGCTGGAACGAGATGACGGTGAACTCG 91889 28 100.0 32 ............................ ATGTCGAATACGTTGGGGGCGGCGACCCCATC 91949 28 100.0 32 ............................ CATGACGATCGCCTGGGCCTCGGCGAGCCGGC 92009 28 100.0 32 ............................ GAGCTGCGCGACACCGCCGAGCGGGCCAAGAA 92069 28 100.0 32 ............................ TGCAGGCCGAAGCCGTCACAGACACCGTCGGC 92129 28 100.0 32 ............................ CTGATCCGGACGTGGGGTCCGAACTGGATGAC 92189 28 100.0 32 ............................ CATTCCTGGAACCAGTCGCGGATCACGCTGCC 92249 28 100.0 32 ............................ GGAACCGCTGGCCAGCGGAACCATGTGCGTCA 92309 28 100.0 32 ............................ ATCGGCGGGATTCCCGCCCGCACCGGCGATGT 92369 28 100.0 32 ............................ AACTCGCGCAGCCAGTTGGTCAGATCATCAAG 92429 28 100.0 32 ............................ AACGATGCACAGATCACGCGCGGCGACGATGG 92489 28 100.0 32 ............................ GTTCCTCGCTGCGGTAGGTCAGCGTCAACATC 92549 28 100.0 32 ............................ AGATGGTCCTCTTAACTGGATGCCTTCGTCTT 92609 28 100.0 32 ............................ GCGTATACGTGCCCATCCCGGCCGCGCTCACC 92669 28 100.0 32 ............................ ATGATCTTCGTCGTTATGCCTCCCGTTTGGCA 92729 28 100.0 32 ............................ CGAACCCATGCGCAGAAGCGCACTACGATCAC 92789 28 100.0 32 ............................ TCGTAACCGGCCAGCCCGGCCACGGCAAAACC 92849 28 100.0 32 ............................ TACACACTCCGGAGAATGCCGATCCTCACCCG 92909 28 100.0 32 ............................ ATGGGGAAGTGGTAAGCCATGCTGGTATTCAA 92969 28 100.0 32 ............................ TGCAGGTGACAAAGTGAGCGCCCTTGTCTGGA 93029 28 100.0 32 ............................ TCGATCAGTCTGGCCTGGGCGGCGGTGGCTCT 93089 28 100.0 32 ............................ AAATCCGGATTGATCCAAGCGGCCCACAGGAT 93149 28 100.0 32 ............................ ACTCCGCGCCATGGCCAAGGAAGGCAAGCTCA 93209 28 100.0 32 ............................ TGGAGCATGCCCAACTTGTCGCCCGTGAAATC 93269 28 100.0 32 ............................ TGGCAGCGTTCGAGATGCGGGATGCCGGCTAC 93329 28 100.0 32 ............................ AGTTCGTAATGATCGCTTCCTTACGCGCCTCC 93389 28 100.0 32 ............................ TGTTCGACGTTGAGCTTGAAGGGCAGCGGGTA 93449 28 100.0 32 ............................ ACCACTTCCCTACCCTGATACGCCGGAGCCGA 93509 28 100.0 32 ............................ AGCTAGCGAAGATCGCAGGCCTCGACCCGAAA 93569 28 100.0 32 ............................ TGCAGGCGCAGCAGGAGGCCGCCGCGCGGCTG 93629 28 100.0 32 ............................ CCCGCCGTCACCGTCGCTCCCGCTCCGTTGCC 93689 28 100.0 32 ............................ AGTCATAGCGCCGCACGCGAGCGCCCGTGGTC 93749 28 100.0 32 ............................ TGATCCGTCAAGTCTCCGAACTCCCCGCCGCT 93809 28 100.0 32 ............................ TATTCGAGGTGCGCTATGCCCCTGACTCCTTC 93869 28 100.0 32 ............................ TGTCAAACAAGCCTCCCTTGTCCACATGCAGG 93929 28 100.0 32 ............................ ACCGCGAACATCGAGGTGGATTACAGCCACGG 93989 28 100.0 32 ............................ ATCGAGCCAATGCAGGCCATCTCGCCAAGCTC 94049 28 100.0 32 ............................ ATGTCAGCAGCGTGGTGGTCAAGAAGGGTGGC 94109 28 96.4 32 .......A.................... GCAGATCGCCAGGGATGTCCGTCGCCTCAGGG 94169 27 92.9 0 ...A.................-...... | ========== ====== ====== ====== ============================ ================================= ================== 49 28 99.8 32 GTTCACTGCCGCATAGGCAGCTCAGAGA # Left flank : GCTGCGCGCGCTCACGGCCACGACCTGGCTCAACGGGATGCTTGACTACCTTAGGATCTCGGAGATTGAGCCAGCTCCCACTGGTACCCGCCATCGCCATGTAAGCCGCGTGCAGGCCAAAAGCAATCCTGCCCGTCTACGCCGTCGCGCCATGCGCCGGCATGGATTGGACGAGAAAACCGCAACCGACCTCATCCCTGACTCAGCTATAGAGCGTTTGCGACTGCCATTTGTGATGCTGGGAAGCCGTAGCACGGGACAACCATCATTTCCGCTTTTCATCCAACATGGCCCGCTACTCTCCACGGCCATCCCAGGAAAATTCAACAGCTACGGCCTGAGCCGGGAGGCAACCGTTCCCTGGTTCTAACCCTTTTCTTTTTCAATCTTTCGTCCTCATATAAATCAAAAACTTATCGGCCGCCCCTGGAAAAGGGGAGCGGCCGTCCTTTTTCTTAGCATCGATAGAATTTTATGGGTAGTTGCGGGATATTTTTCTA # Right flank : ATGCGGGCAGCCCACCACCGCCATCTTGACCGCGTCGTTGCGTTTGCCTGAAGGTATGAACCTGCCTCCAGCAAATCGCCTACTCCCCGCCATGCCTCGCCTGCCTCGCCTCGCTCTGCCCCTGCTGCTGCTCCTTAGCGCCTGCGCCTCGGCGCGCACGCCGTGGGTGGAACTGGGCGGCGAACGCTACAAGGTCGAGATCGCCGCCGACGATGCGCAGCGCGCGCGTGGGCTGATGTTCCGCGACAAGCTGGAAGCCGGGCACGGCATGCTCTTCGTCCACGACCGCCTGGAACCGCAGGCGTATTGGATGAAGAACACCAAGATCCCGCTCGATATCCTCTACTTCGACGACGAGCGCCGGCTGGTGGCGCAGCAGCGCGACGTGCCCCCGTGCTCGGCCGGCGACCGCTGCCCGCCCTATCCCAGCCGGCGCCCGGCCCGCTACGTGCTGGAACTCAACGCCGGCGAAGCGGCCAGGCTTGGGTTGGAAGAAGGCG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTCAGAGA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCATAGGCAGCTCAGAAG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [60.0-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //