Array 1 5127-2771 **** Predicted by CRISPRDetect 2.4 *** >NZ_MCMO01000019.1 Pseudomonas aeruginosa strain F462 isolate CPHL9433 IPC95_19.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 5126 30 100.0 36 .............................. TTCGAGTCCTACGTCGGGGTTGCCTATATCCGCGGT 5060 30 100.0 36 .............................. ATCGCTGGCGCTATCGACGTATCGATTCCGAAGCGT 4994 30 100.0 38 .............................. TCTACTTCGTGAGAAAGACCGGATTCGCCTTTCAACGT 4926 30 100.0 36 .............................. GGCAACTGCCTCACCGGGTCGCGTCCATCGACGAGT 4860 30 100.0 36 .............................. GGCCATCGTGAGCGCCGTCTCGGCGTCGAGCAATGT 4794 30 100.0 36 .............................. CGTCACCATCTCTTTCAGAGCGTCCAGCACGTCCGT 4728 30 100.0 36 .............................. CACGGAACCTGGACAATCGGGAACGGGCCCCAGCGT 4662 30 100.0 37 .............................. ATCCTCGAACAGTGGCGGCCTGAGCGTGTCATCTCGT 4595 30 100.0 36 .............................. GCGCCAAGAACACTCAGAAGCTGGAGCCTGGCATGT 4529 30 100.0 37 .............................. GACTCATACATCGCGCAGAACGATGGCCAGCGCAAGT 4462 30 100.0 37 .............................. CCGCTGAACCATTGGCTAACAGCGGGATACGAGATGT 4395 30 100.0 36 .............................. AGCACCGCATTGGTCAAGCTGCGTGAGGGGATTCGT 4329 30 100.0 37 .............................. TTGAGCGCTGACTCAACCACTTGCCGCATTGCCAGGT 4262 30 100.0 37 .............................. AATGAGTGCGCCGAGGACCCCGGCTCTGGCGGCGTGT 4195 30 100.0 37 .............................. ACTGATGATTGCTGACATCGTTACCTCCCTCCTGCGT 4128 30 100.0 39 .............................. TGCAGAGAGGCTCGCGCCACTTCGAACTCGTCGTCATGT 4059 30 100.0 36 .............................. GCTGATCTGCGGCTCCGACTGCCTGCAGTTGAGCGT 3993 30 100.0 38 .............................. TAACTCGCCTTTGCCCCACTCGAACGCATACAGCACGT 3925 30 100.0 36 .............................. CATGTCGGGGAACAGCTTGTAGTGCTGCGGGTGAGT 3859 30 100.0 35 .............................. TTGTGTATACCTACGTCGAAATGCCGATCATGAGT 3794 30 100.0 36 .............................. GGTAGTTCACGATGTCGCCTGACTTGTGGTTGTTGT 3728 30 100.0 37 .............................. TTCCCGGAAGGCGATGCAGCCGAAGCGATCAAGGCGT 3661 30 100.0 34 .............................. GGTATCACGTCGCCTGTGCGCGCGGCGGCATTGT 3597 30 100.0 36 .............................. TGTCGTGAATGCCGGAATCAGTACGTCGTCATTGGT 3531 30 100.0 36 .............................. AGTGCGCAGCTCCCCGACGATGCGCTCATGCTGGGT 3465 30 100.0 36 .............................. GTCACCAACGGCGCGGGCGTCGTGGTGGCATACCGT 3399 30 100.0 37 .............................. AACAGCGTGGCCGAACAGGCGCCACGCCTGATGCAGT 3332 30 100.0 37 .............................. GCTACCCGGAACCACCGAAGAAGCCCACCGCCGGCGT 3265 30 100.0 38 .............................. CATCAGATCAAGGCAGCACTGGTTGAGAAACCCCACGT 3197 30 100.0 37 .............................. TGCGGATGCTCGATGCGCCTGGTGAGCAACCACGAGT 3130 30 100.0 35 .............................. GGCGCAAGAGGGTAGGGGTGATCTGGTCCAGCCGT 3065 30 100.0 38 .............................. TTCTTGAGGGTGGAGAGGCGGGCTACTTTTGCCGGTGT 2997 30 96.7 34 ...........T.................. CATTGCTCCGAGAGCACGTTCGTGCCTGGCATGT 2933 30 96.7 38 .......T...................... AGCCCTGGCCAGGTCGTAATGACCGCAGCCGGTGAGGT 2865 30 90.0 35 ...........T................CA ACTGCCGTTGTCGCGTGACGGCTATCAGGGAATGT 2800 30 83.3 0 .......TA.G............G.....G | ========== ====== ====== ====== ============================== ======================================= ================== 36 30 99.1 36 CGCGCCCCGCACGGGCGCGTGGATTGAAAC # Left flank : CATTTCTGTGGAAGTGAGGTGGCGACATGATGGTTCTGGTCAGCTATGACGTGAGCACTCAAGATGCTGCAAGTGGCAAGCGCTTGCGCCGCCTGGCCAAGGCCTGCCGCGATTATGGTCAGCGAGTGCAATACTCGGTGTTCGAGATCGAGGTAGATAGCGCGCAGTGGACACTCCTTAAGCATCGTCTGTGCGACCTAATCAATCCGGAACAAGACAGCCTACGTTTCTACTACTTGGGCACGAACTGGCAACATCGTATGGAGCATGTTGGGGCCAAGGTTGTACTCGACCTAAATGGCCCGCTGATTCTTTAGCGTCGGCGCGAACCTAAAGCGACCGACCCAACCCTGAGGGGTTCGCAGCTCTCTAGCTGATTGATTTATATACTCTTTTTTTGACGTTAGCAGTTTGATGGCGCGCGCCTTGCCTAAATAAGGCATGTTTCGCTGAAGTAAAAGGTTTTTTTCATGCTGATCAGTAAGTTATAAGTGGGCGGT # Right flank : ATGGATTTTTGGGAGTTTGTCCTGAAAAATTTTGTCTCGCCACTCTCTTCCCGGCTCAGAGCCTGGCCAGGAACTCTTGTGTCACAGTGTCGCGGCCCCAAGCCGAAAGAAAGACCAGGTTGCGCTGCTCGTCGCACACGCAGGCGTCGACGTACAGGTCTGGGCACTCTTCGATCTGGTAGAGCGGGGTGGGACTGGGCATAGGAACCTCCTGGAAGGAGGAGCCACGCCGCCCTCGAGGAGCGGTGAAGCCCCTCGGGGTGTGGTCCAACTGGTGCAGGGGAGCGTGGTGGTTACCGAACGCTCTTGGTGTGAGGGTCGAAGCTGAGCCCATCGTCTTGGTGCAGCGGCCCTTGGCCGTTCAGGAAGACCTGGCAGAGGTACTGATCGCGTAGCGCGACAGCCGCTTCCGCCTGCTCCAAGGTCAGCGACAGCTCCTCGATGAACAGGTCGATGAGCTCGTCGTCGCCGGCGACGTCGTTGTTGGACAGTTGGTCCTC # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CGCGCCCCGCACGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CGCGCCCCGCACGGGGCGCGTGGATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.80,-6.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 307694-308501 **** Predicted by CRISPRDetect 2.4 *** >NZ_MCMO01000004.1 Pseudomonas aeruginosa strain F462 isolate CPHL9433 IPC95_4.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 307694 28 100.0 32 ............................ ACGGCTGCCGGTGCCTATCGGTTCGCCGCTGA 307754 28 100.0 32 ............................ ACGACGACGAGAAGGATGGCAACCGGCGTTTG 307814 28 100.0 32 ............................ GTCGCTCATCCTGACGACCGTCGCACCGAACA 307874 28 100.0 32 ............................ AGCAGATACCCGAACCACTGGAGGTACATGCA 307934 28 100.0 32 ............................ TTCATCAGGATGCCGCCAAGGGTCCGCATAAT 307994 28 100.0 32 ............................ ATGAAGGCCAGCAGGCCGAACACGATTGCGAT 308054 28 100.0 32 ............................ TCGAGCAGCGGCCCGAGGAGTCCGAAGACTTG 308114 28 100.0 32 ............................ TCGATCACAGCAAGCCCTACCTGACGGTCGAT 308174 28 100.0 32 ............................ GTCTTGACCTCGACGACCTCATAAGTAAAGGC 308234 28 100.0 32 ............................ TGGAACCCGGAGAAGGACGGCAGCCCCACCGA 308294 28 100.0 32 ............................ TGTCCCAGGCGCAGATACACCTGCCCGTCCAG 308354 28 100.0 32 ............................ CGCTTGTGGTCCAGCGACTGGCCCTTCGCCGG 308414 28 100.0 32 ............................ TGGAGAAAAGCAATGCGAGTGGTGCGAGGCCA 308474 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 14 28 100.0 32 GTTCACTGCCGTATAGGCAGCTAAGAAA # Left flank : CATGTGTCCGCGTAGCGCGACCCTGTACGTGGACACCCATGCACTCCCCACGCACTTGTTCGACAACGCGAAAGTGCGCCTGAGGTCGGCGATCAACATCCTGGCCATGACCCGTTTGCTCGATGAGAAAGAAGAGCCCGGCGGCACCCTGGCCTACATCAACGGTGCGTTGCTGTCGCTGCTCAGCGATGCCTTGTCCGAAATCGAGGCGGGCCACCCGAGCCTGTAGCGCCGCTCCCTGGCGCGACGCCCCCGGCCTGGCCGGGGGCTTTGCGGCATCGCCCATCACAAGACCTTTCGCGCCCGAACGGCGAGGCTCACCGCCCGTCCCGGTCCTCGCGAAACGGCCTCCAATTGCCCGAAACTTCCGACCCTTTTTTCGGACGATTTCTTACGCCCTTATAAATCAGCAAGTTACGAGACCTCGAAAAAAGAGGGTTTCTGGCAGGAAAAACTCGGTATTTCCTTTTCCTTCAAATGGTTATAGGTTTTCGGGGCTA # Right flank : ACTCAAGAAAGAGCAGAACGGCCAGCCTGCGCCGTTCATTGCCGTGTAGTCCCGTAGGGCGAATGCCGCCATAGGCGGTATCCGCCCTACGGATCGGGTTCCTGGCATGCACGAAGTGAGGCTTGCCCTCCGAGTGGTGGGGCGGCAAACCCGCCCCGTCAGGAGGCCGAGCGGAATCGTTGCGGAGGGGGACGAGTGGCAGGATGCCGCGAGAGCCGCCTCGGTCCACGAAGGACCGTGGCGGCGTGCCGCCGGGAGCAACGATGCAGCGAGGGCACCCCAGCCGAGAAGCGGCTGGGGCCGGATGCCGGGGCGAGTCTTTTGGTTCCTTTTGGACGCTTGCAAAAGGAACTCGCCTGGGAAGGCGAAACAAGAGACCAAGGCAGGCACAAAGAACAGCTTGACCACCAAACATGACGCCCGCTCAAGCGCTAAGCAACAGCGTCCCCCCTCACTGCCGTGTAGCTAAGAAGTCGCGAGCGATATAGTCCCGTAGGGCG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGTATAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [58.3-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 33064-33811 **** Predicted by CRISPRDetect 2.4 *** >NZ_MCMO01000016.1 Pseudomonas aeruginosa strain F462 isolate CPHL9433 IPC95_16.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 33064 28 100.0 32 ............................ ACCAGCGCCGTGCGCTGGATGTGCAGCGCTTC 33124 28 100.0 32 ............................ AGGAAGCTCGGGAGGCATGCACTCTGCGCAGC 33184 28 100.0 32 ............................ TACCGCGATGGCGCGGTGATTGAGTACGACAG 33244 28 100.0 32 ............................ GTGGCGCGATCCGCTGGAGCTACAACAGCAGC 33304 28 100.0 32 ............................ AGCACCGAGCTGGACGCCGACACCGAGCGCTT 33364 28 100.0 32 ............................ GATACCGACTGGACCGTTCCCGATGATGTGAA 33424 28 100.0 32 ............................ ATGGCGCTCAACGGGTTACAAGCCGCATGGGC 33484 28 100.0 32 ............................ ACCATCCGTACGCGCCGTTGCTGGCCGCGCCA 33544 28 100.0 32 ............................ AACCGGTCGCAAATGACTGCAAGGGCTGCTTC 33604 28 100.0 32 ............................ TGCGCCAGGTGCTCCACCAACGCGAGGGGGCT 33664 28 100.0 32 ............................ ATGCACAGCGCGTCGATCCGCGGCAGCTTCAC 33724 28 100.0 32 ............................ TTTCCTCGGTGATGCCCCGGCGAACCGGGGCG 33784 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 13 28 100.0 32 GTTCACTGCCGTGTAGGCAGCTAAGAAA # Left flank : ACATGTGTCCGCGTAGCGCCACCCTGTACGTGGACACCCATGCACTCCCCACGCACTTGTTCGACAACGCGAAAGTGCGCTTGAGGTCGGCGATCAACATCCTGGCCATGACCCGTTTGCTCGATGAGAAAGAAGAGCCCGGCGGCACCCTGGCCTACATCAACGGTGCGTTGCTGTCGCTGCTCAGCGATGCCTTGTCCGAAATCGAGGCGGGCCACCCGAGCCTGTAGCGCCGCTCCCCGGCGCGACGCCCCCGGCCTCGCCGGGGGCTTTGCGGCATCGCTCATCACAGGACCTTTCGCGCCCGAACGGCACGCTTGATCGCCGTCCCGGTCCTCGCGAAACGGCCGCCAATTGCCCGAAGCTTCCGACCCTTTTTTCGGACGATTTCTTACGCCCTTATAAATCAGTAAGTTACGAGACCTCGAAAAAAGAGGGTTTCTGGCGGAAAAAACTCGGTATTTCTTTTTCCTTCAAATGGTTATAGGTTTTCGGAGCTA # Right flank : ACTCGAACCCACCTCGGCCACAACAGCCGCCGGGTTCGCTGCCGTCTAGGCAGAACCACCCTCCCCATCCCGCTCCCAAACATCCGAATATAAAAGTTCCTACCCCGCCCGCCCGCCTCGCCCGTCCACGACAATGTGCCCCGCTTGGAAGCTCACGCTCCTCATACAGACGAAAACGGGGTAGCGGCAATCGGCCATATCCGCTAAACATTTGCCTTGGCGCAGAATTCGATAGATCCGATAGGGACAGGCCACGGTCAGCATGGACGACATTTCTCCCAGCGAACTGAAGACGATCCTTCACTCCAAGCGTGCCAACCTGTACTACCTGCAACACTGCCGGGTACTGGTCAACGGCGGGCGGGTCGAGTACGTCACCGACGAAGGCCGGCATTCGCACTACTGGAACATCCCCATCGCCAACACCACCAGCCTGTTGCTGGGCACGGGTACCTCCATTACTCAGGCAGCCATGCGCGAACTGGCCAGGGCCGGGGTAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGTAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTGTAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [61.7-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 43393-42345 **** Predicted by CRISPRDetect 2.4 *** >NZ_MCMO01000016.1 Pseudomonas aeruginosa strain F462 isolate CPHL9433 IPC95_16.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 43392 28 100.0 32 ............................ AGTGCGGAATCGTGGGCCTGCAGGACCGCCAC 43332 28 100.0 32 ............................ GACGAGTTCGAGGCTTTCGCCTTGCTGGTCGC 43272 28 100.0 32 ............................ GAGTACAACGACCGGCCGCACAGCAGCTTGCC 43212 28 100.0 32 ............................ TGGAATGACCGGGCCGTCGTTGAATAGCACGC 43152 28 100.0 32 ............................ TCGTCATCATGGCCACGCAAAGCCTGTCCGAC 43092 28 100.0 32 ............................ AGAGGACGGCGCACGTTCGGGTAAGTCTGGCC 43032 28 100.0 32 ............................ ATAGAGGCCGAAGCTGTAGCCGGTGAAATCAA 42972 28 100.0 32 ............................ TTGTAGGCCGAGCGGACAAAGGCGGTGGCGTG 42912 28 100.0 32 ............................ TGCGACACCAATGGCAAGCGTTCGAGATCAAG 42852 28 100.0 32 ............................ ACAATGCTCAAGCATCAGGAACAAACCGAAGT 42792 28 100.0 32 ............................ TGGCAGCCGTGGAGGGAGCAATGGACGACGCT 42732 28 100.0 32 ............................ ATTTCCAGCAGAGTCTTCCCGGCGGTGGCCAC 42672 28 100.0 32 ............................ AGCCCGACGCAATCATCGAGTCCAGATTGACC 42612 28 100.0 32 ............................ GTAATCGGCGCGCTGGTGCATAGCCCCTGGAC 42552 28 100.0 32 ............................ TGAAATTGTTGCTCATCGAATAATCCCCACCA 42492 28 100.0 32 ............................ GTCATCGGACGAATCGCGTCACCAACCGCCCG 42432 28 96.4 32 ........................A... TGTCCCGAAGTTCATAAGCGGGCTTCGGGCGA 42372 28 75.0 0 T.........AC.....TC.TC...... | ========== ====== ====== ====== ============================ ================================ ================== 18 28 98.4 32 GTTCACTGCCGTATAGGCAGCTAAGAAA # Left flank : CGAAGTCGTCGAGGACGAACCAGGCCTGGTCGTCGATCAGCAGCGCGCGCAGCAATCGCTGCTGTCGGAAGAAGTAGTGCGGGGCAAGCTGGGTATGGCCGTGCATAGGAGAAATCCTTCTCTGAGCTGTCCGCTGCCTGGCTTCTGCCGGCGCGGCAGGGAGACAGGCCGCTCGTGGGTGTTGGGCCAGCAGGCTGTGGCCTGCCGGGAACCGAAGTCGCCGGCGAAAAAAGCCTACTGACAGCGCCTGTAGGACGGCAATGGCTAAGCCTTGTACGAAGTCTCTGATGGCACAAGCCCGCTGAACAGCTAGGCCGTTCTGAACATTACGCCGGCATGGAGAAAACAGGGGATGGACGCTATGCTTGGGAACCCTTTTTTTGGTGGTTTTTTAAAGCCCTTTTAGATCAGAGGGTTAGAGATCGCTGCGAAAAGAGGGTTTTTCCGGGCTTTGGCGCTGGAGCCCTTGGAGCTTGGAAGGTTGATGGTTTTTTGGTCTT # Right flank : CGGCCAGCAGCCCTGACGTATCGATTGATGCGGTTCGCTGTCGGCCGGGGTCATCAGTCGAAACGAAGTCCCTTTCCATGGGACTTCGTTGCGGACATGCCGATGAGGCGCTGACGGGGTTCTTTAGAACCAGGGAACGAAACCTCCTTTGCTCAACCCGTAACAGGTGAATCCTCCTTCCTCTGCCGTCGCCTGCAACGGCCCGTGGCGGATGAAGAGACGGAAGTGCTGTCCGGTACTCTGGCTGCGTAGCGTGACGAAGGGCAGGTCCAAGGTTCTCGCGACCGTATCGGGAATGCGTTTCCGAGCCTCCTCCTCACTCAGATCGTGCCGGCGCATGAGCCGCCGCCGCAGACGTTCCGGATTGCTTTTCGCCTGAACCCGACTGACCTGACGGTACGGTGTGGGGTGAGGCACGACTGCCGCTTCTCCGAATTGCAGATGGTCCCGCAACCCTTCCAGCCAGGGCCGGGCGAGCAGGGCACGAAGGTCGTCCGCCG # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCGTATAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //