Array 1 26883-25085 **** Predicted by CRISPRDetect 2.4 *** >NZ_VIOU01000013.1 Vibrio cholerae strain A12JL36W75 NODE_14_length_76662_cov_27.195704, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 26882 28 100.0 33 ............................ TAAACCGCAACGTGACGAAAGGTAGCGTGCTTA 26821 28 100.0 33 ............................ TGGAGAAAGGAAAAGAGTTAACAGTGTGTCAAC 26760 28 100.0 33 ............................ CGCTTGATAGCATCGCTCAAAAGCAAGCCGATC 26699 28 100.0 33 ............................ TGTATCGCTACTGCGCAAAGTGAGTTTTGCCAG 26638 28 100.0 33 ............................ TGAAGTCATTTCAACGCCACTGCTTCTGGTTGG 26577 28 100.0 33 ............................ TGTTTCACGCTTAGAGTCCTGTATAGCCCCAAA 26516 28 100.0 33 ............................ CGAAAAACCCCGTCGGTCGGCAAACTCAAACGG 26455 28 100.0 33 ............................ TGGCGTGTGTTAGGACATTCTCTCCGCCATTAT 26394 28 100.0 33 ............................ CTTTCTAGCGTTGGTAATTTCTTGCTCTAATAT 26333 28 100.0 33 ............................ CTTGGAGACAGCAGAGCGGCACGGTATTTCGGT 26272 28 100.0 33 ............................ TGATGTGCTGATGGCAGAGCGCGTGCGCGAAAT 26211 28 100.0 33 ............................ GATTAATCAATCTAATTTCTGGAGATGAGGGAT 26150 28 100.0 33 ............................ TAAACCCAAAGCTACTGTAGAGTGCCTTAAATG 26089 28 100.0 33 ............................ CAAGAAGGGATCAAAGCCTTTCGTTTCTTCTGG 26028 28 100.0 33 ............................ CAAAAACGATGCTGTAAATTGCGTGGAACCTGC 25967 28 100.0 34 ............................ CGGGGGCTATTAAAAATGTCAGTAGCAAAGCCAA 25905 28 100.0 33 ............................ CTTCACATTGTCGCTTTCCGTCCTTTAGCAGCT 25844 28 100.0 33 ............................ TTTGCTAAATATATTGCTGGCGGAGTTGATAAG 25783 28 100.0 33 ............................ CTAATCAATGTATCGAGTTTGGCCGAACTTATA 25722 28 100.0 33 ............................ TCTCCAGTCCAATATCTTTGGCGTAGTCATGCT 25661 28 100.0 33 ............................ CCAAGCCAAACCAACTGGACGACCTGCACAGGC 25600 28 100.0 33 ............................ CGTAGTAAAGCTGAGAGCCGTGTTTGGCTTCCC 25539 28 100.0 33 ............................ TAACAACGATCGCACTGTCAGCTTTAAGACTGG 25478 28 100.0 33 ............................ TTTAACGGCCAGAACGTGCCTGAGTTAGCGATC 25417 28 100.0 33 ............................ TTCGGAGATTCAGAGAATGCCTATCGCAATCCC 25356 28 100.0 33 ............................ TGGAAGAGCGTGATCTGCACTACGCGGCGCAGT 25295 28 100.0 33 ............................ CCAGCTCACTGCCTGTTAGCTCATACACATAAC 25234 28 100.0 33 ............................ CCGCATCAGCCAAAGCGTAGACGTGGAGATTGA 25173 28 100.0 33 ............................ CAAGCTCATGTATGATAGCGGCCTTGGTTGCTG 25112 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================== ================== 30 28 100.0 33 GTCTTCCCCACACAGGTGGGGGTGTTTC # Left flank : CTTTACAAAGAACACCTTTGTATTGATTTAGCTTTCTCACTTACCCGAGATATGGCAGGTCACTATGACAAACACAAGGTCTCTGATGCGTTTCGAAAACGGGTTATCAGCATGGATTTGTTACAACAAGTCTCCTCGGATATCAATGAGTTGATGGGAGGGGGAAATGCTCGTCGTACTAGCAAATGATTTACCCCCGGCAGTCAGAGGGCGTATGAAGCTATGGTTTGTTGAACCCAGAGCCAATGTGTTTGTTTCTGGCGTAAAAGATTCCGTTGCAGTGACGGTTGTCGACTACTTAATGCAGCATTGCCCAGCAGAATCGGGCTTGATGTTATTTCGCAGTATTCCAGATCCCCCTGGTTATGAGATTCGCTACAAAGGTGAAGTGCGCAAACCCGTGATTCAGCTCTCTGGATTACAGTTGATTGTCGAAACCCTTATTTTGTCAAAATAGCAATATATGGGTTTATTACTGTGCTCTTTAACAATATATTGGT # Right flank : TTTGTGGGTGCAACGTCTGAGTACGCTTGGTTTGTCTTCCCCACGCAGGTTGGATTACAGAGTTTTATATAGGCTTAATCTTTGAGTTATCAGTGAGCCGGATATGGAAATGACGGATAAGTTAGGAAAGTTATTGCGAATTAAATGTTGAATTTACTGAATAGAGGGGCGATATGATGATTCTATTACAGGGTTATTGGGTTGGGGCTGCGCTGGTGGCGTGCGGCTTGCTGTGGGTGATGGTTAGGCACTTGGATAAACATGATTGGCAGTGGGACAAAGGCGACATCTGGTTTCATTTTGTGTTTATGGTGTTGTTCTGGCCTTTAATGCTTTTGGGTTGGGTGAAACAGGGCAGGCCTCATTGGGCTGATTGGCTGAAACCTACGGCTAATCGTGCCGATTATTACCGAGAAATCGAACGTGCCTATCGAGAACTGAAAACCTGTGGCGCTTATGTTCGCTATAAACCCAAACCAGAGGGGATTTGTGACAACAGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACACAGGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCTTCCCCACGCACGTGGGGGTGTTTC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.10,-11.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [48.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //