Array 1 46195-44848 **** Predicted by CRISPRDetect 2.4 *** >NZ_VHFT01000029.1 Acinetobacter baumannii strain MRSN31461 MRSN31461_contig00029, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 46194 28 85.7 32 C.AAA....................... CAACTGGTGAACGTGCTCAAGTAGTTATACCG 46134 28 100.0 32 ............................ ATCAGCCGTTTTGCCTGACTTACCAACGCCGT 46074 28 100.0 32 ............................ TACAGACAAGCCATTTACAGAAGTAACACAAA 46014 28 100.0 32 ............................ GTCATAGTCCTTCTGAACACCAAATGTATAAG 45954 28 92.9 32 ...TC....................... GGTATTAGTGCGAATTGGCTTTTAGCCCACGC 45894 28 89.3 32 ....C.......GT.............. GTGTTTTTCGATATGCTTCGAAAGGTCATCCT 45834 28 89.3 32 ...TC.....A................. TGATGGTTCAGCATATATAGCTAGACGTACAC 45774 28 82.1 31 ...GC......TGT.............. ATCACAAACACAACCAAAGGTGAACGGGTAT 45715 28 92.9 32 ...GC....................... TTATCTGCCATACCCGACTGCTTTGTTCCTAA 45655 28 85.7 32 ...GC.......AT.............. ATTTTTATTCCAAGGGCTTTTGCTTCTTGTGA 45595 28 82.1 32 ...GC......TAT.............. TTCAAATGATTTAATGAGCTTGTAGCCATTTT 45535 28 85.7 32 ...GC.......TT.............. ACGTCTTCTAATGATGGACTTTAATCCAATAT 45475 28 85.7 32 A..GA.......T............... ATCTCACTGAAGATATGACCATCACTTTCTTC 45415 28 89.3 32 ..CGC....................... TTTATAACCACCAGTTAAAGTATTGACTAAAA 45355 28 75.0 32 ...GC.G...A.A..AT........... ACAATCGGGGACGTGGTCAAAAAGATTATCAG 45295 28 89.3 32 ....A.......AT.............. GTGTTGATGTTGTTGTTCAGATCGTTTTTGGT 45235 28 85.7 32 ...GC....T..T............... GACATGCGAGCTTTCATTTAAATGTGTCATCA 45175 28 96.4 32 ............A............... ATTAAAGCATTTTCATATGAGCCTTCCTCATT 45115 28 92.9 32 ....A......T................ TTCGGATCAGTCCAGTCATCATCCTCGTCAAT 45055 28 82.1 32 T..GT.......GT.............. TATCATTGCGCGACAGAACGCATCAATTAATG 44995 28 92.9 32 ...GC....................... AGATCTATGCAAGATTTATTGGTCTACATTAG 44935 28 89.3 32 ...T........AT.............. CAAGCTGATGCTTCCTTATGGTTACAGTCAGG 44875 28 75.0 0 ..CGC.......AT..........AT.. | ========== ====== ====== ====== ============================ ================================ ================== 23 28 88.7 32 GTTCGTCATCGCCCAGATGATTTAGAAA # Left flank : CGTGTGCAAATTTATGTTTTGCTCCGACAACCCATACTAGCTTCATTCTTCGCACACCAAAATTAATGTAAGCAGCTACCGCAGTTTGTCGGGTGGCTACTTTTTTTAATGCGCTTCGGATTTCTTTTAAGCCGTCCATTGTCATTGGTGCTTGCCAAGACGAATCTCCTGTACGAATAGCATAGCTATCCAAAATTGCTCTTGTTTTCTTTAAAGCTCTTTTTTCACAAGCAGAGATGAGAATGACATGCATAGTTTATTGTTAAAGTTTGAATGTAATAAAAATATAATCTTTTGTTTTAAAAAGAGAAAGTTTTTATCAGCTTAATACGGCCTTTTAACGACAAAATACGTCGTCTTAAATTTTGAAAGGAACTCTTTTAAATCATCTATGCGATGAATAACCCTGTGAAGGACTCTGATCACATCTAACGCAATTTCTAAATCATCTGGGCGATGAACAACCTCATTTCCACCGCCGACTAACGGCACAATGATTT # Right flank : TTTGAATCTTAAAAGAAAAAACCCCGAAACTTTCGTTTCAGGGCTTTTCACGAATTTTGGTGGAGATGGCGGGAGTTGAACCCGCGTCCGCCAGCACTACGCTCGAGAATACTACATGCTTAGATATCGTCTATTGTTTTAACACCAAGTGACCCGACGAACAGGGTACAAGGTGCGATCCTCTAAGTTTGGTATAAAGCCCCGAGGCTTGACTCTATACGGACTTGTGTGCGTGCGCTTCAGTCGGGTTCCCAGACCACAAGTATTCTAGGAAGCGGACAAGCGGCCCTTAGGCAGCTAGAGCGTAAGTTTCGTCGTTTGCGACTATTTAAATGCAAATTTTATTTACGAGAGAAAATGCGCTCTCGGCATGCATCTATGAGTTTCATCACCGGCGTCGAAGCCAATAACATCCCCATGAATGTCTGCACATCATAGCATAACTAAAATAAAATGCTGTGCATTTTATCAACAGTCTGCCACTGATGAACATACTTACA # Questionable array : NO Score: 4.89 # Score Detail : 1:0, 2:3, 3:0, 4:0.44, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.19, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGTCATCGCCCAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.87%AT] # Reference repeat match prediction: R [matched GTTCGTCATCGCCCAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [14-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.91 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //