Array 1 26754-29954 **** Predicted by CRISPRDetect 2.4 *** >NZ_PVTQ01000022.1 Donghicola tyrosinivorans strain DSM 100212 Ga0181042_122, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 26754 29 100.0 32 ............................. GATAGCGGGTTGACATTTGACGAAATGGTTGA 26815 29 100.0 32 ............................. GCGCTTCTTCTGGTATTAACACATTCCCGCTC 26876 29 100.0 32 ............................. TATTGGCAGGTCGTACGGCGTAACTGGGCAAT 26937 29 100.0 32 ............................. CATGCTAAGCCCGAATGAAATAGCTGAATACA 26998 29 100.0 32 ............................. CGGTGCAATCTGTTGACGTGCGATTGTCTCTG 27059 29 100.0 32 ............................. CGCGGGACGCCTACCAAGCACATATTGACGCA 27120 29 100.0 32 ............................. CCCTGATCGAGGAGCTCGCGGCGCAGGTTGCC 27181 29 100.0 32 ............................. GTGGCGCGGCTTGGCTACAATATCAGCGGATA 27242 29 100.0 32 ............................. CCGGTCAAACTCAGGCCCTACGCCGCGCGTAC 27303 29 100.0 32 ............................. TTCTACGCATGGGTAGAACCGCGCATTGGTGC 27364 29 100.0 32 ............................. GCGGATGTGATCGGGCTCGGTGCCGAGCTCGA 27425 29 100.0 32 ............................. GGTAGTAGTGCTCCGTCCGCCCGTTCGTTCGG 27486 29 100.0 32 ............................. AACGCAGGAAAATCAGCAACCGAAGTTGCTTG 27547 29 100.0 32 ............................. CCTGAGCAGGGAGGATGGACGTGTAACCCGAC 27608 29 100.0 32 ............................. CCCATTTCCCGCCATGATTTGATGATCGGGGC 27669 29 100.0 32 ............................. GTCCGCAATCATATTCAGGAAGTCGGACGCCA 27730 29 100.0 32 ............................. CGCACGCTGGTTGGGACCCTGAGAACCATGGA 27791 29 100.0 32 ............................. CGCGCGCTGGTTGGGGCCTTGAGAACCATGGA 27852 29 100.0 32 ............................. TTGCATCCGGCGTTTGGTCGGGTATCCAGACC 27913 29 100.0 32 ............................. TTACAGAAAGCTGGTTTGAACGGTCGATATTC 27974 29 100.0 32 ............................. AGCCTTTCCGGCAAGCTGGACCCCAAGCACGT 28035 29 100.0 32 ............................. CGGTACAGGGTAAGGGGACGCTCCGAGCCTTT 28096 29 100.0 32 ............................. ATCGCCTAGCTGAACTTGACGACTGGGCGGCG 28157 29 100.0 32 ............................. AAACGCGATGCAGACCCTGAGTTCCAAATTAA 28218 29 100.0 32 ............................. ATCGAGGAATACACCCCGCCCGTTACCACCGT 28279 29 100.0 32 ............................. GTCGGCCTTTTGGTCTGGTGTCACCTTGAATA 28340 29 100.0 32 ............................. GTGCCCGATGGACGAGAACAGCCTAATCACCC 28401 29 100.0 32 ............................. CGGACCGTATATCATTTTCTGAGGCTAATACA 28462 29 100.0 32 ............................. TTCGACCACGACCGAGCCATGTTTATGGAACA 28523 29 100.0 32 ............................. AATAAAGACCAGTTCGAGAATGCCAAGGCGCA 28584 29 100.0 32 ............................. ACAGAGGCCCATGACATCATGACATCACTAAC 28645 29 100.0 32 ............................. ATGGACAGGGTAGGTCGGACGCTAAAAAACGT 28706 29 100.0 32 ............................. GACCGCCTGAACGCGGACTTCGCGGCTGCGCG 28767 29 100.0 32 ............................. GGCGTAGACGGTGACAGTCCATCTTTAAACTA 28828 29 100.0 32 ............................. ACAAGTTACGCCGCAACCATGCTGGCCCCTGA 28889 29 100.0 32 ............................. TAGCGTCACGCTGGCATTCCCGCGATCAGAAC 28950 29 100.0 32 ............................. CCTAAAATGTACATGTACGTTGAGAGTGCCGT 29011 29 100.0 32 ............................. GATGCGTGGGCGTTCGTCAAGGCGCAGGCTGT 29072 29 100.0 32 ............................. GAACTGTCGATTAACGTTAGCGGCAACACGAG 29133 29 100.0 32 ............................. TGCAGATCCTGCTGCTCCGTATTGCTGAAAGT 29194 29 100.0 32 ............................. TTGATCGGTTAGAGAAGGCCCTAATTGACGTT 29255 29 100.0 32 ............................. CCGCAGTCGGATATCCAGCTTGAACTGGTTTC 29316 29 100.0 32 ............................. GCGCTAGCAGACCGGGCTACAGATACCGCCAC 29377 29 100.0 32 ............................. AGGTCGATCAGGTTTACGACGTGACCCCTGCA 29438 29 100.0 32 ............................. TTTTTTCGAGACGATAGAACGCTCGAAATTGA 29499 29 100.0 32 ............................. CAGGTTCTGCACCGCCGTCTTGCCATACCCTG 29560 29 100.0 32 ............................. GAGAAACCAATGACACACACATACAAATCAGA 29621 29 100.0 32 ............................. GCCGAAGGTTTCCCCTCAGCCCGTCAGACGCA 29682 29 100.0 32 ............................. CCACGGCGGCGGAGGACTTCGGCAAATGCGGC 29743 29 100.0 32 ............................. CAGTTGACCGAGTACATGGACCAGATGCAGCG 29804 29 100.0 32 ............................. GCCAGACGCGCCGCGCCATAGCTTCCGGTCAC 29865 29 100.0 32 ............................. ACCGCAGACGGGTATCTAGTGGCCGAGGCTTA 29926 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 53 29 100.0 32 CTGTTCCCCGCATGCGCGGGGATGAACCG # Left flank : ATTGAGGAAGTTCTGTCGGCAGGTGATTTGCCAAAACCTGATGCGGCACCCGAGGCTTTGGGGCCAGCATTTGATGATCCGGCGCAAAGTGGAGATGACGGGCACAGATGATGGTCGTTGTTGTCTCCAGCGCGCCACCAAGGCTGCGGGGTCGGTTGGCCGCTTGGCTCGTTGAGGTCAGGGCGGGTGTGTTCGTCGGGAACTACAGCGCCAGAACGCGGCAAATGATCTGGGAGCAAATCGAGATCGGCATCGAGGATGGAGATGGTGTCATGATTTGGAAGGCTCCAACTGATCAAGGCTATGAATTCCTGACTGTTGGTCGAAACCGGCGCATGCCGGTGGATTTTGACGGCCTGAAATTGGTGAGCTTCTTTCCCAAATAAGGTCAGCTCAGGCCCGCAGATTTTCTGGGTTTTTGCGTACTCCTAATTGCCGGATTGTTCGGTACGTTCTTTGACAATTGAAAAATTATTGTAGATCAGTCATCTACAGGAAGT # Right flank : GTGTCGCTGCAACTGCGTGCGGTGGGTTCAACCGGTCAACGCAACATCTTTGATATGAGATAGTGTGAAAGGACTGAGCATGGCGCAATCTGCACGTATTGGATTTTCGCAAGAACAGAAGGCGGAACTCTGGCAACGCTGGAAGAATGGCGACACACTGAGCGAGATTGGTCGCGCCCTGGGTAAACACGCGGCCTCTGTCTTTGCTATCCTCGTTGCGCGTGGTGGCTTCGCGCCTGTGGCGCGCAGGCGTAAGGTGGGAGCGCTTACCTTTGCAGAGCGAGAGGAAATTTCGCGCTCCCTGAGTTCGGGGCGGTCTGTGCGGCAAATCGGTCGTGATCTTGGACGAGCCCCCTCCACGATTAGCCGTGAGGTTTCGCGAAACGGGGGACGTTTAGTATATCGAGCATCTCGGGCCGACGATCAGGCGTGGGCGCGCGCCCGTAGACCCAAGCCATGCGCATTGGCGCGCAACCCCGAACTCTGCGCCTTGGTTGCTG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTCCCCGCATGCGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCATGCGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [66.7-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //