Array 1 18333-19555 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAJCHK010000018.1 Staphylococcus haemolyticus strain SH_36 isolate 106 C-2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 18333 36 100.0 31 .................................... GTACTTTCTACATAGGTACAGACGGATATGT 18400 36 100.0 31 .................................... AGTCCACCAACTTTTTCAGTTTCAAGCTCAT 18467 36 100.0 30 .................................... AAACATTGTTAAAAGCAATGGCCAATCCTA 18533 36 100.0 30 .................................... CTTCTTTAGCTTCACTAGCACCTTGAAGGC 18599 36 100.0 29 .................................... TAGACATGGACGTAACTATTATTAGGTCT 18664 36 100.0 29 .................................... ATATGGTTTTCAACTTTTCCCACTCGTCT 18729 36 100.0 30 .................................... GTATTTCTTTTTCTTCTTGAACATTAATAT 18795 36 100.0 30 .................................... ATTCGAAAGAGATGCAGAGTATCGACAACA 18861 36 100.0 30 .................................... AGGGGGCAGACCTAGATAAACAACAAGAAA 18927 36 100.0 30 .................................... CTGAAAGCGATCCAAGTGATTTAACAATCA 18993 36 100.0 30 .................................... CTGTTTTAGCAAGAGTAGTTAAACGTTTAA 19059 36 100.0 30 .................................... GTGTTTAATTTTCGGTTAATAGCGTCCTGG 19125 36 100.0 30 .................................... TTACTGACGGTAGAGGTATTCAAACGTTTG 19191 36 100.0 29 .................................... ATACATTCGAGTTCAATCTATCCTACTAG 19256 36 100.0 29 .................................... TTAAATATTACATATGAACCATTATTAGA 19321 36 100.0 30 .................................... ACGTAAAATAGACGGTATTGAAGTTGGCGG 19387 36 100.0 31 .................................... GCTATACAACATATAGAAAAAAATGTACCTA 19454 36 94.4 30 ..............................A....T AAGTAATGAATATATTGATATGACGAAGTA 19520 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 19 36 99.7 30 GTTTTAGTACTCTGTAATTTTAGGTATAAGGTATAC # Left flank : GATTATCAAGCAAAAGAAAAAGCATTTGTAATCTATTTATATCCAGAAGCTGGTCTTAGCATTAAAGAACAAATAAGATTTAGGAAAATACTAAATAACTTACCTGTTCCGGTCATTGTTTTAACCGAATCACCACGTTTTTTATCTGAAAGTATTAAAGGACTAAATTATTTTATTAATAATATTCAAATGATTACAGAATCTTTTTTTGAAGATAGCTATTGGAATGCGCCAATTAATGTGGAAAAAGAACGGATTGAAGAGAGGTTTGAGTATTTATTTGTAAAATATTGTTCAGTTTTAGAAATAAAACCGATTATCTCTAACTACTTGCTTGCGGATATTATTGTTTTTAATGATATTGATCTTTATATCATTGTTTCATTTTTAAAACATTGTAATTTAGAATATCAATTAGATATCGATAAAACAAAAATTTCATTAGCGTTATCAACTTATCTATTTTCTTAATTATAATTCAAGCTTATAATTGTGCTAGA # Right flank : CCCTTTGGCGCGCACATTACCTTCAGGAATAGGACTAACGTGTCAATCCAATCTTCATTTGATTATGAAGATAATATTACAGGTTCAGACTTTACAATGCCTTTAAAAGAAAGGTATACTTACAACCCAATTGAGAAAAATGAAGTTATAGTAACTAACGCCTATGAAAATTACTGGAGTTCATGTATTGATACAAGACCTAGTTTAGTTGAAAGGTTATTTGAAAGGTATATAGAAAAAAATAAAGAAATAATAGACTTTGTTTATAAAAATGGAGACAAAGGGCCGCAATATTTTTCTTTAGTTTATGGTACTAATTGAGGTATTAGTCACTTTTATCCTGATTTTATTATTAAATTAAAAAATGAAGAGATTTATATTGTGGAAATAAAGGGCGGCCAAGATCAGTACGGCAATGAAAAAAACATTGATCCGTACTCTCATGCTAAATTTAATTCATTAAAAAATTATAGGGATAAACATAATTTAAAATGGGCGTT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTACTCTGTAATTTTAGGTATAAGGTATAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: F [matched GTTTTAGTACTCTGTAATTTTAGGTATAAGTGATTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.60,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //