Array 1 526390-525492 **** Predicted by CRISPRDetect 2.4 *** >NZ_AP025235.1 Phocaeicola vulgatus strain MG01-07 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 526389 33 100.0 33 ................................. ACTTCTGAGTAATCTACAAAATTAGGTTCTACA 526323 33 100.0 34 ................................. GTTGATGATGGAAGAGATGAATGAGGTTCATGAC 526256 33 97.0 34 ................................G GTCTTCGGGGCACACCATTGCTGTCCAATATCCT 526189 33 97.0 33 ................................T TGTAGTTTTTTTTGCACCAGATGAAACTGATAC 526123 33 97.0 33 ................................G TTTTTTAAAGATGAGGCTATCCGTTTGGGTAGT 526057 33 100.0 35 ................................. ATTAGCAAGAGTTGGAATTATGTCATCTAAACCTT 525989 33 100.0 33 ................................. TGAAGTGGCTGCCGCCGGAGGTATGTGCCGGGG 525923 33 97.0 32 ................................C ACCGCCTCCTGTCGTGCCTGTATCACTCCAAA 525858 33 97.0 34 ................................T AGACCTGTTTAGCATTAACAACCAGTATGCACCG 525791 33 100.0 32 ................................. CAAACTTGACGGATAAGAGGAATGATAACAAA 525726 33 97.0 34 ................................T CCCAGGACATAACTATAGAAGGCAGGAAATACGC 525659 33 93.9 34 ...........T....................G GTCTGTATGTCGATGAGCCGGATTTCTTCGGGGA 525592 33 100.0 33 ................................. CCTTCGACTACCTGGAGGAGATACCTGCACATG 525526 33 93.9 0 ....................A.........G.. | TA [525503] ========== ====== ====== ====== ================================= =================================== ================== 14 33 97.8 33 GTCACACCCTGCGTGGGTGTGTGGATTGAAACA # Left flank : ATATTGACGATTATCCGGTATTTCTTATAAAATGATTTTTAATTATGTACATTCTTGTGACTTACGATGTGGATACTACAAGCAAAGAGGGGGCTCGCCGTTTACGATGTGTGGCCAAGGCTTGTCTGGATTATGGACAGAGGGTGCAGAACTCAGTCTTTGAGTGTGTAGTGACGGAAGCGCAATATTCTCTTCTAAAAGGGAGAGTTAGGGATATTATTGATATGTCTCTTGATAGTGTTCGTTTTTATATTCTTAGTAAAAATGAGAATAAGAGGGTGGAAGTAATAGGTGTTGAAACGGCGTATAAACTTGAGGAGGCTCTTATAATATAATGCGAATGTGGTGTGTTACAAAAAAAGTAGTATCTTCGCATGTGTTAATAATCAGTAGATTAAATTATTTGTAAAGTATTTCTTCGTTATGAAGTTGAATAATAATGATGATTCGCATAACAGTGGATTAAATTTGCTGATTTATAATATGTTATTAGATATAGA # Right flank : TTGTTCACTCGTTGGTCAAGTTTATGGAAGAATTGTAAGCATTCGGCCTCTTGTGTATTTCTCTTCAAGCTGTTATAAAGTCAAAAGCCAAACGAAGTACGTTAGGCTTTTGACTTTGTTATGACTGGAAAAAACACGCACAATCCCGGATGCTTATCTTTTGTCTGTCTTCTTTTGTGGTTTCACCTAGGTGACAATACATTGGCATCTAAGTGGAGAGGCGTAGTCACCCAAGTGATACGCTTGCTTCACCTTGGTGAAACTATAAATTCAACTAAGTGTTTCAAAGCAAATATATTATATTTTTACTATACTATCCCTTGTTGCTTATTTGTTATATTATTGATTATTAATGTGTTGTTATCTGTTTGTATCGATTGTTTTTCTTATCTTTATAAGATATATTAAAACATAAACTAACATGAAAATTGGTATAATTGACCTTTGTAAACAAATAGAAGATCCTAGTATGAACCGCAAGAAAGTCCATAAAATGGAAA # Questionable array : NO Score: 5.84 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACACCCTGCGTGGGTGTGTGGATTGAAACA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCCTGCGTGGGTGCGTGGATTGAAACA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.70,-5.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //