Array 1 4567-4268 **** Predicted by CRISPRDetect 2.4 *** >NZ_QSSA01000060.1 Prevotella copri strain TF06-40 TF06-40.Scaf60, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 4566 36 100.0 30 .................................... TGACCGATGAAAGTCCGCGTCACAAGGCGA 4500 36 100.0 29 .................................... ACTGCAGAAAAATAAGCAACCCCTCGCCC 4435 36 100.0 30 .................................... TATAAATTTCTATAAACAGATGTACGCAGG 4369 36 100.0 30 .................................... GCCCTACCGCAGCACGGTTAAGCGGAAACT 4303 36 91.7 0 ...........T....A......T............ | ========== ====== ====== ====== ==================================== ============================== ================== 5 36 98.3 30 GATGGATATACATTCTGAAAGATGGGTAAGTACAAC # Left flank : GAAACGATTTGCATGGAGAATCTATCCATTAAGGACGGAATGCTCCAAGACAAAAAACATGGTAAGCACAACAAGCAAAAGCGTTCTCGTAACAAGATGATTATAGATGCTTCTATGGGTATGTTGCGAACCAAGCTAGAGCAGAAATGCAAGTCAAGAGGAATCAATTTTATTAAGATTGGTCGTTATGTTCCTTCTTCGAAAACTTGCCATTGCTGTGGTTTTGTATTCAAGGGATTGCAATTAAGTCAGCGTTCTTGGATATGTCCGTGTTGTCATACTGCATTAGACAGAGATATAAACGCTGCAATAAATATCAAAGAATTTGGAATTAGTGATAATTCCCTAGGGAGGTGTACCCCCGAAGTTAAGTCTGTGGAGCATCGTAAACAGAGACGAAAAAATGCTATCGGCAGTGACGTTTCAGATGTTTTGAAGCAGAAATAAGATTGCTCTAACATTGAGCAAATGCCTGTTATTTAGAATGGTACGAACATCAC # Right flank : GGATAACATAACATACATTCATCTTAAAGAAAGGAATCAGTTGCAGTGATGAACAGCTATGCAAGCCAAGGAATATCGAATCTCAGGCAAGTCCATACGTATGGACAGTAAACTCATTTCCGGCAATATCGCCTGGTATTATCGCTATGAGATGTCTGTCAGCTTTAGTAAAAAGGCAACGAGAATGAGTTCCGTCAGGAAAATGAACCAAGTATGAGCATAAGTATGACAACGGATAAGTCTAAATAGGATAAAAATATTTAAGGGGGAAAGCAGTTGACAATTACAACTGAACCTTCCCCCATTTCTTATTTTCTTAAAACTCTACCTCAAACTATTCTCCTATATTCCTCTTCCTTCTTCAGCTTATCATAAAGTTCCTGGGCTTTGGAATAATCTTTATCAGATTCTGCAAGCCACTCCGAAAAATGGTGGCTGTGGTTCTTTTGGGTTTCCTGCTTGCGGAAACAAGCCGGTTAGTTGTTGCAAACTACCCAATA # Questionable array : NO Score: 2.97 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATGGATATACATTCTGAAAGATGGGTAAGTACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 1 79212-88093 **** Predicted by CRISPRDetect 2.4 *** >NZ_QSSA01000012.1 Prevotella copri strain TF06-40 TF06-40.Scaf12, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 79212 30 100.0 36 .............................. AAGTGTTTGTTAGATAAGCACGAATTTCGAACTTAA 79278 30 100.0 35 .............................. ATGGTACAACTGGTAAAAGCAACCGGGGAATGGGA 79343 30 100.0 37 .............................. GCATGGACAGCCTTTATTTGATGAGCGAGGAAAGCAG 79410 30 100.0 35 .............................. CAAGGTAACAACAATAAGCATCGAGCGCAGAAAAT 79475 30 100.0 37 .............................. GTCAAGATGTATTTCGACACATCAACGAAGTACGAGC 79542 30 100.0 37 .............................. AGGTTTCTAGTAAACCAAGGAGGCACGTCCTCGGGGA 79609 30 100.0 35 .............................. CACATTCACGCAATAGGCAACTAAAAGCACATAAG 79674 30 100.0 35 .............................. GACAAGTCGCAACGAAATACAAGGCATGTAAAGAC 79739 30 100.0 34 .............................. GCCAGTAGTGAGCGTGGAGGAGATAAACCGAACC 79803 30 100.0 34 .............................. AGTCCGTTGTAGCGGGCAATATAATTAAAACATT 79867 30 100.0 35 .............................. TCTGACCGAGGACTGTATATCAACTGGAAACATCA 79932 30 100.0 36 .............................. CAGTTTGAAGGGATGACCAAAAGGGAAGACGCCGCC 79998 30 100.0 35 .............................. AACAATTTTAAATTATTTTGAATAAGGCAAACCGT 80063 30 100.0 36 .............................. ACGTGTGAATAGTCTAACTGAGGAATGGCACGGTAA 80129 30 100.0 33 .............................. GTTTAATATCGTACGCTTGAAGGCTGATAAATC 80192 30 100.0 34 .............................. GTTTAATATCGTACGCTTGAAGGCTGATAAATCA 80256 30 100.0 37 .............................. GCTGGCTACAGAGATAGAAAAATTTATCGCAGAGCAA 80323 30 100.0 36 .............................. TTTCTACCTGGTAAAAATGATACGGACACAAAAGGC 80389 30 100.0 35 .............................. ACCATTTCATCTAGAGAAACATAGAAACAAAGGGT 80454 30 100.0 36 .............................. CAATGATAATGAAAGTATTAACAATAGGGGCAATCG 80520 30 100.0 36 .............................. GCTGATATGCCAGCCCAATACTTTCAAAATTTAGGT 80586 30 100.0 36 .............................. TACCGCATGACCTTGGCAAAATACAAACAACTTAAT 80652 30 100.0 37 .............................. GTACTCTCAGCGCATCCAGAATGTCGTGTTCAAAAAC 80719 30 100.0 36 .............................. TGGCAACCCAGGTGACCTAGAGTTCCTCGACCCGGA 80785 30 100.0 34 .............................. AACGTATTCCTCTTTCGTCTCCTCAAAGGTATGA 80849 30 100.0 34 .............................. AAGGTTTTTGGATTGTTATTACATACAAATATAA 80913 30 100.0 35 .............................. GATTATTTTCTTGCGATTGTTCCTGGTGCCCTCCA 80978 30 100.0 33 .............................. GCGCATGTTGATGGCAACAATCGGTGCTGCTTA 81041 30 100.0 33 .............................. AGTGATGAAGTAGTAAGAAATATACAATATGGT 81104 30 100.0 35 .............................. TTTTAAGATTAGAATATGGACGAGAACAAAATTGA 81169 30 100.0 35 .............................. AGGTCTATCCATTTTCTACCCTCTGAGTTCATCGA 81234 30 100.0 36 .............................. CACGTATACTTTACTTATCAGGGATGAAGACACGCT 81300 30 100.0 34 .............................. GGCAGAAAACCTGAAGGAGGCGTGCCAGGCATTC 81364 30 100.0 36 .............................. AGTATCATCACCATCGTCTGTGTTAGGTGCAATGTG 81430 30 100.0 35 .............................. ACATGCTTCCCGATATTCTTCAGATAGATTTTTAT 81495 30 100.0 35 .............................. TCGGTACTGCCTTATCCTCATCATCATTTATATAT 81560 30 100.0 35 .............................. CTCATTCGAGGGGTATTCAAGTGGTATGCAGTGTA 81625 30 100.0 36 .............................. TGGTAGAGAGACGAAGACCGGAAGAACATGGAATTC 81691 30 100.0 34 .............................. CAAAGATAGATATAAAGAAAATGAAGAAAAATGA 81755 30 100.0 37 .............................. AAGAATCTAGAGTGCAAGGAGTGCGGTCTACTAAGGA 81822 30 100.0 35 .............................. CCCTCAAAATAATCACGAGCGCTCTTAAGTTCAGC 81887 30 100.0 34 .............................. TAAGTAGACGCAGTAAACTTACAACCGGCAGATA 81951 30 100.0 34 .............................. CTGAGTAAAAACTGGTAACAATTCACCAACTTGC 82015 30 100.0 37 .............................. ATCTGATATGACAAGATTCGGGCTCGAAGATTCCTCC 82082 30 100.0 34 .............................. CTTGTAAGCGAAGGCCGCGAAATTTGACTATTGC 82146 30 100.0 35 .............................. AAGGTATGCCGGAGCGGCGGCGCGCACAGCAGTAA 82211 30 100.0 36 .............................. TTTACAATATTGTACACTTGTTTTAACTCATCTGTT 82277 30 100.0 34 .............................. AAGTAACAAAGGCTAGTGTTTTTCATAGGTATTA 82341 30 100.0 34 .............................. GCAGGAGTGGAAGTCATATTCATAACCTGACTAT 82405 30 100.0 34 .............................. TTCAGTTAGCTGGCACCAAAGCGGACGGCGCAGC 82469 30 100.0 35 .............................. ATTATACATACCCCTTATAGCGGAAATATTCGCTA 82534 30 100.0 38 .............................. TAAAGATAAGGCTCTCGGATACCGCTCTTTCGGTCAAG 82602 30 100.0 36 .............................. TGGCATTCAGCAATCTTCGGGTGGTTGGTTTACTTA 82668 30 100.0 34 .............................. GCGGTTAAATACATATCCTCGTACAGCATACCGA 82732 30 100.0 34 .............................. TCTATAATAGAGATAAACGTGGATTTCCTTATAA 82796 30 100.0 34 .............................. AGCAGTGGGAACGTTGGCTCCAGCAGTATGTTTG 82860 30 100.0 36 .............................. AGACTTGAGAGAATGGCAGAAAGCACCGTTGTATCT 82926 30 100.0 34 .............................. TGGGTGATAATTTTACTATTGATACTAATTTTAG 82990 30 93.3 34 ........C.C................... TACTCGCCCCTCTCGCCCTGGATGCAGCCCTCAT 83054 30 93.3 35 ........C.C................... TTGTGTACATCTTATGCCTTTCGATATGATGCTTT 83119 30 93.3 37 ........C.C................... CCATAAACGGAAGGAAAGTTGACTGTGTTTATTCCGT 83186 30 93.3 34 ........C.C................... GGTAATATGTCTGCATTGAAGTCCATCATACCGT 83250 30 93.3 35 ........C.C................... ATTAAACCGAGTGCATAAATAAGCACTTTCAAAAC 83315 30 93.3 35 ........C.C................... AAGTCTTAAAGTTCAGAGATTAAGAGAAAACCGAG 83380 30 93.3 35 ........C.C................... TCATAAGGTTTGGGTTCAAACCTGCTTGTTCCAAT 83445 30 93.3 34 ........C.C................... CGCCATATAAGAGAAATGTTTAAGCGGTGCTACC 83509 30 93.3 34 ........C.C................... CTAGATGATGAGTGCACCCCACTGCCTGGATAGC 83573 30 93.3 34 ........C.C................... CCTTCAGCCCGTACCTTCAGCAGCGAGGAGAACG 83637 30 93.3 34 ........C.C................... AGGAATTGCAGGACGCAATGGCTTCTCTTTTTGA 83701 30 93.3 34 ........C.C................... GGCGAAGGAAATTGTGGACGAACTCAACAAGGAG 83765 30 93.3 34 ........C.C................... AGACAACTTGAAGGCTATACGCAGGAAGATAAAC 83829 30 93.3 38 ........C.C................... GTTAAGGTTGGCGATTATATCAGCGACAACTGCGATAC 83897 30 93.3 34 ........C.C................... TGCGATCGCCTGTCTTCCACTGCCAGAAATTCTC 83961 30 93.3 37 ........C.C................... TTGTTTAAACGGGGAAACAGGCTACTGCAGAACACAA 84028 30 93.3 37 ........C.C................... TATGTATCGGCAGTAAATTTCATCTTAGCAGAGCCTG 84095 30 93.3 34 ........C.C................... TAGCCGAGCAACTGCAACAACTTAGCAGATGCAG 84159 30 93.3 38 ........C.C................... AACGACTGGATAGATGGCATCTATAGTTTCAATAAACT 84227 30 93.3 34 ........C.C................... TATAAGGGCATAGTCGGTAGCCCCCTCTTTAGGA 84291 30 93.3 34 ........C.C................... TAGAAAAATTCTGTCTCTGTAGAATTCCTTTGCA 84355 30 93.3 36 ........C.C................... ATATTGGAAGAAGTGGGATATACTGCACTTCATTAA 84421 30 93.3 34 ........C.C................... TTCAGAATTAGTTCTGAATCGATAGGGTATGTTG 84485 30 93.3 34 ........C.C................... GCTTGTTGTCGAAGATGTCCTGAAGGTCGATGTT 84549 30 93.3 37 ........C.C................... TATGGTATCTTTCCTGCCCTTCGTCCGGTCTCGAGTA 84616 30 93.3 37 ........C.C................... TCGTAAAGGCTCAACAAAGAGTTTGACGTTCTCTACA 84683 30 93.3 34 ........C.C................... AAGGGTGATTAAGGTAAGCAGATTTTCTTAAAAT 84747 30 93.3 35 ........C.C................... AGGGTTCCGTAGCTTTCAACGAGTACAAAGACGGT 84812 30 93.3 35 ........C.C................... AAATGCTTGTCCTTGCCTATGCCGTCAAACCTCTG 84877 30 93.3 34 ........C.C................... CTAGATGATGAGTGCACCCACTGCCTGATAGTGT 84941 30 93.3 34 ........C.C................... CTAGATGATGAGTGCACCCACTGCCTGATAGTGT 85005 30 93.3 35 ........C.C................... GGAAGAAACCTTTGTTTACGAGATTAAGGAGTTTA 85070 30 93.3 34 ........C.C................... ACTTAAAGATATTGATTATGATGAATTTCGGAAA 85134 30 93.3 34 ........C.C................... TTACGAATATCACGAAATATCACAGGAATATGTA 85198 30 93.3 34 ........C.C................... ACGGAAATGTGAAAAAGAACATAATTTAGACGTT 85262 30 93.3 34 ........C.C................... TACGTCTTTGCAGTGAACTTGATAGACGCAGAAC 85326 30 93.3 34 ........C.C................... GTTCACAAAACGACAAGTAGAAGGCTCGTAGGAA 85390 30 90.0 35 A.......C.C................... AAAGCGGCAGTACTCCTAATAACATAATTAATCAA 85455 30 93.3 34 ........C.C................... GCAGAACCGCCGTTCATCATCAAATTAGGGTTAA 85519 30 93.3 35 ........C.C................... GCAATAGTACTACCAATATCAGGAGCAACCTGAGT 85584 30 93.3 36 ........C.C................... GCTTGTGATATGTCCTGACAAGGTGAAGAATAGGTA 85650 30 93.3 34 ........C.C................... GGTGATTCTGTTAAGGTTACTAGTTCTTATTTTA 85714 30 93.3 37 ........C.C................... ACAGAAGAACGATTGATAAACTTAAGAAGATAGGCAT 85781 30 93.3 36 ........C.C................... CTCATTTGGGAATAATAAGAAGCCTGAGAACCGTAG 85847 30 93.3 36 ........C.C................... ATAGGAGCAGCCTTAAGAGCATTAGACTGAGACCAA 85913 30 93.3 35 ........C.C................... TAGGTACACGAACAGCCGGAACGTTTGCATCATCA 85978 30 93.3 36 ........C.C................... GACTTATTCTCCTTATCATTTCTAACCTTAAAGTTA 86044 30 93.3 36 ........C.C................... CCTTCAGCCCGTACCTTCAGCAGCGAGGAAAACGCA 86110 30 93.3 36 ........C.C................... GGGCTTTTATTTGCTGCTTTTTGAGGTCCACTATCT 86176 30 93.3 35 ........C.C................... TTTATCGTGCTAATTGGTACGGAGGCGGTTTTGTC 86241 30 100.0 35 .............................. AACTGATGGATATGCTGATGAAGCATGGTAATCGG 86306 30 100.0 35 .............................. ATAAGCAACCTTTGTGAATCCGTTGAGAAGTTCAA 86371 30 100.0 34 .............................. GAAGATGATTGTTGCGAGTTGATTCGTAGCATCT 86435 30 100.0 36 .............................. AACTGAGCGGTAGGCAAAACACCGTTAAAATAATCA 86501 30 100.0 34 .............................. ACAAGTAGTTGGTGCCAATGCAGTAAAAGCTGCT 86565 30 100.0 36 .............................. AACTGGATAACCGCGAAGAGGCTACTGTGATTGAGT 86631 30 100.0 36 .............................. GTATTCGACCGCATTTCGCTGCCTAAGAAAACGTGG 86697 30 100.0 35 .............................. TGTGGTAGCTGTATTGCTTGCCAAAACCAAAAGCG 86762 30 100.0 35 .............................. AGTATTAATAACGTTGTCCTCCGCAGCCGCAAAAT 86827 30 100.0 35 .............................. GTATCAAAAGAGTGAAACTCAGAATTGGAAGGAGA 86892 30 100.0 36 .............................. GAAATGTCATGAGTATGAATAATAGTTGGAGACTGA 86958 30 100.0 33 .............................. TAACATTCGGTAACTCTTACTGTACTGTTACAA 87021 30 100.0 37 .............................. TGACGATATCTCCGTCCCATTGGCTGCCCTTGGTAAT 87088 30 100.0 36 .............................. GCAAGCGGCATAACTATACACAGAGACAAGACTGGA 87154 30 100.0 34 .............................. GCAGAAACATCTAAGGCTGAGAATCAGCCGGCAG 87218 30 100.0 34 .............................. GACAGAACACAGAGCGGCTTTGAGTGTATTGCAT 87282 30 100.0 36 .............................. AGGAATATACTTCTGCTCCAAAGCAGTGCTTTATCC 87348 30 100.0 36 .............................. TTACCCTGGATGGCACCCATCAGCAAGTTGCTATTC 87414 30 100.0 35 .............................. GAAAATGCTTCTCGCCAAACAAGCCCAGATATACA 87479 30 100.0 35 .............................. TTATATTTGGGTTCACCATTCAATATGACTGCTCC 87544 30 100.0 33 .............................. AATGATGATGTTATAAGAAACATACAATACGGA 87607 30 100.0 36 .............................. GATGGTGGAGAACTTGGGTGTCCGAACAATCGAGAT 87673 30 100.0 36 .............................. TTATCATCCTTGATTTCTTTTGCCTCAAACTTGGAA 87739 30 100.0 34 .............................. ATGTAGGCTCTACACCTAGCATTATGACCTTTAA 87803 30 100.0 36 .............................. ATGATAAATTTGGCGAGTGTGGTAGCGACTTTTACA 87869 30 100.0 36 .............................. TCAAGGAAGGCACAACCACTGTAGAGGAGACCTTCA 87935 30 100.0 34 .............................. TTCTTATCAGAAGAGAAGGCTGAGAAAGACTGCA 87999 30 100.0 35 .............................. GAAGGACATCAGAGCCACTATCGAAAGCCCTGACA 88064 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 137 30 97.5 35 GTTCTAATTGTACCTTTATGGAATTGAAAT # Left flank : CCTTTTAAAATGTATTGGTGATATGTATGTGATTATAGTTTATGATGTAGGTGAGAAGCGAGTAGGCAAAATGTTGAAGCTTTGCCGCCAATATTTGTGTTGGATTCAGAACTCAGTTTTGGAGGGAGATTTATCTGAAGCTAAACTTCGGGAATTGCAAATGAAGATGAAAGCTATCATTGATGAATCCGAGGATAGTGTCATTGTTTTCACCAATAAAATGGGATATAATATGAACAAACAGATTCTTGGAAAAGAAAGAATGTCTACCGATAATTTCTTATAAAGAGTTGTCGATGTGGTTCTATTTTTCCGTTTCTAGGTTCGGAAAAACCTCCAAAAGTGTTCTTTGACTTATTGAAACCTCCATAAATAGGCTGGTTGTCGTAAGGCCGCAGAAAAAATATCTTTAGGCATCGACATTTTTTCTGAAGATTTTTTGTATCTTTGCACCCACAAACCTATTGATTCTTCGAGCATCTATGCCTAAGGATTAACGG # Right flank : TATAAGCGTTTCTTAGAGGAAGATTTAGCTATCAAAAGTCTGATGTAGATTCGTACAAGATTATAGTTGATTTAGCGAATGATTATCAATGAATTAGATGGTTGTTGCATTGTTTTTGATACTAAAAACAGAAACACAAAACTGGACACCCTACCATAGGGATGATCTAGGGCAATTCATCTTTAATGGTTCTGCAGTCCCTGCTGATACAAGTAAAAATCACCATTCAGGGACTGGTCGATTTGTATGGTTGACAATGAGGACAATGAGTCTTTCAGAATCTGGCGATTCTACCAAAGAAATCAGTCTTGAAGAATTGATAGACAATTTCGTAGCTGATGATTTTTCTTCCATTATCAGCAGAGAAATTAGCAAAATCAGTCTATTTTTCTTTATTTAACTCCGAAATTGAGTGGAATATCAGAGAAAATCCATAAATTTGCATCCAAATACAATATTTTGTAAAGAATGGAAGATAGAGAACTATTACAGAAAAGTGC # Questionable array : NO Score: 9.14 # Score Detail : 1:0, 2:3, 3:3, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTAATTGTACCTTTATGGAATTGAAAT # Alternate repeat : GTTCTAATCGCACCTTTATGGAATTGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.80,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA //