Array 1 282530-279802 **** Predicted by CRISPRDetect 2.4 *** >NZ_LVDG01000004.1 Shewanella algae strain melkephyllucas scaffold00004, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 282529 28 100.0 32 ............................ ACGTAAAAAATCCGGCAACCACATGCTGGTGC 282469 28 100.0 32 ............................ GATCCTTGAATTCAAGGACGGCCAAGCACTGG 282409 28 100.0 32 ............................ GACACCGGCCAGGGCAATCATTAGCGATAGAA 282349 28 100.0 32 ............................ TGTTAGCTATACCAACAATACTGACCGGTCAT 282289 28 100.0 32 ............................ AAATTGCCGGATAACCTGAGTGTTGGCGGCTA 282229 28 100.0 32 ............................ ATTACGGCCAGTAAAAGGACGGATACCACCGT 282169 28 100.0 32 ............................ AGCTTGGTATGGACGGGTTAGGTTCGTTCACA 282109 28 100.0 32 ............................ TCGGCCTTTATCCGAGCCTGTTCTTGTTCCTG 282049 28 100.0 32 ............................ AGGAGAAGCCCTTGAGCTTGGTGCCGAAGGTG 281989 28 100.0 32 ............................ CGGGTTAATACCTTGCCGTTGTCTTCGGTATA 281929 28 100.0 32 ............................ AGCAAAGAGCGGGCCGGTGTTGCCCTTAGACT 281869 28 100.0 32 ............................ ATTTGGCATTGAAGTGATTGTAAATACCGATA 281809 28 100.0 32 ............................ TGGTTTGATGGACGCCATTGACGGCATTAAAA 281749 28 100.0 32 ............................ AAGCAGGTAATGAATACCATTGACGACTTATA 281689 28 100.0 32 ............................ TCACCACGGTGATCAATCACAGCGACGATTGA 281629 28 100.0 32 ............................ GGCTGTTGTTTTGTAGAACGCCTCACCAGCTT 281569 28 100.0 32 ............................ ACCGCAATGGTGGGTACCGTGTACTCGTTCGA 281509 28 100.0 32 ............................ GATGCGAAAATTCGTACGTACCTTTCGCAACC 281449 28 100.0 32 ............................ TTATGCCAAAGACCATTGACAACGTGCTTGCT 281389 28 100.0 32 ............................ ATATCGGCAAGGCGATCACCAGAGATTGCATA 281329 28 100.0 32 ............................ GTATGGCTGGTTGCGAATCTCAATGCCAATGT 281269 28 100.0 32 ............................ ACAGTCCACAATTGATTCTTCATTCTTCCTCT 281209 28 100.0 32 ............................ TTCTTGTCAGCAAGCCCAAGGTCACGCGCAAT 281149 28 100.0 32 ............................ AAGATTGGCGACAATTTGAATCTTGGTAGAAC 281089 28 100.0 32 ............................ TAGCCAAGCATTCAGTGGTAACCGTGCCATGA 281029 28 100.0 32 ............................ GGCGCGTACGCTGGCCGCAAGGGTGCCGATGC 280969 28 100.0 32 ............................ TGTTGATGTGATCACGAAACGCTCTGATAGTT 280909 28 96.4 32 .............T.............. TTCTTGTCAGCAAGCCCAAGGTCACGCGCAAT 280849 28 100.0 32 ............................ ACTAAGTGGGGTTTTGCTTTTAGAACAAACCT 280789 28 100.0 32 ............................ GCCAAGGCGGTGCCCTGTAGCTCACCAGAATG 280729 28 100.0 32 ............................ CTTAGCCGTGGCTTTGGCTTTTGTTTCATATA 280669 28 100.0 32 ............................ GAAACCTGAAAAGGAGAAAAGCGACAATGAGA 280609 28 100.0 32 ............................ AGAGCTTGGCCGAGCTGGGGAACGCTTCGTCC 280549 28 100.0 32 ............................ ATTGACACCATGCAAGTAGACCATCTGGTGTG 280489 28 100.0 32 ............................ ATATCAGGAAAAAGGTAGTCAACAGGCCACTC 280429 28 100.0 32 ............................ AACCATAAATAACATAGCTTCTCCTCAGAATC 280369 28 100.0 32 ............................ TTAGCAGTCATATAGCCATTCTTTATCGTGTA 280309 28 100.0 32 ............................ TTATGATTATTGTTGACAGTGTAGCAATATGC 280249 28 100.0 32 ............................ TCCTATCGATATTGGTGATGCCGTTTTCTATG 280189 28 100.0 32 ............................ TATTGGGTACCTAGCTGCTGATGGTCTTTGCT 280129 28 100.0 32 ............................ GTAACGCTTAAATACTTCGGTAACTGCAAGCT 280069 28 100.0 32 ............................ AACTCCCTGTTTTCCATTGACGTTATTCTTCG 280009 28 100.0 32 ............................ TGGAAAAGCAGTGGAAACACCTTTACGTCAAG 279949 28 100.0 32 ............................ ATACGGATATCGTGGGCTCAATCCGCAAGATC 279889 28 100.0 32 ............................ AGTTAGCACCGCCATCATCTGAATAAACCATT 279829 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 46 28 99.9 32 GTTCACTGCCGCCCAGGCAGCTTAGAAA # Left flank : CGAGTGATGTTTCCTACGTGAGCTTTGTACGCAAACAGGTGAAATCGCCTGAGCGGATTGAGCGGGCTATGCAGCAAAAGGCGGCATTATGGGCTGCAAAGTCGGGCAAGCCGCTGGCCGAGTGCTTAACCGATCTTGAAAAAAGCAAACCGACTGGGCAGTGTGATTTGCCATTTATCTTCTTGCACAGCCAGCAAACGAAACAACGTTCGCCGGACAAAAACAGCAAGTTCCCGCTGTTTATCGAAAGATATCCGCAAAGTACACCTGTGGATGGGCAGTTCGATTGCTACGGGCTGAGTCGTAAAGTCAATGGTATTGCATCGCTTGGAACAGTACCGCACTTTTAAGCATCAAAGGGTGAGTTTTACCCTTTATTTTTGCTCTTTAAAAATAAGCTTTATATACAATCAGTTACAACAGGTAGTATTCAACAGGGTAAAAATAGGTTTTTTATCCTAACCACCTGTTGTGACTTTCTTTTATTGCTTTATTCTATT # Right flank : GTTCTTCTGGTGATGACCTTTCCCCCGAATTTATCACTCGGCCCCAGCAAAATCCGAACGTCCTGCATTTGTGGGGCTGAAGAGGCCGAAACTGAGGTGATCTAAATAGCGGCCCGGCTCAAGGCAGCATATCTACTCGAAGTAGTCTGCTGGCGCTGCGGCCTTTGTCGTCGCTGACCGATAACTGGAAGCGTCCTGCTCTGGGCGGGCGCCATTCCAGGGTTTGGCCCGGCAGGCTCTGGCCGAGCAGGCTGTTACCGGCAAACCAGTAGAGTATTTGGCTGTCGGAGGCGGCGTCGGCCTTGAGGGCGATGTGTTCATTCGCCACGCTTTGGCGCAGGCTGTAGGTGACGCCCTTCAACGGGGAGCGGATAAGCGGGGCCGAGTAGCTGACCGCGACTCTTTGGCTGCAGGCGGCCGGAAGCTCCGGCGGCCTCCTGCGGGGTAAACCTGCCTGCTCGAACAGGGCCGCCAAGTCTGACGGCCAGAAGGCAAACACC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCCCAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCCCAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [48.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //