Array 1 18191-15107 **** Predicted by CRISPRDetect 2.4 *** >NZ_LZMM01000019.1 Kocuria sp. ICS0012 contig_26, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ =================================== ================== 18190 28 100.0 33 ............................ GACCGGGAGGGTGACCGGGTGGGATGCCGGGTC 18129 28 100.0 33 ............................ CGGCTCAACAGTGTGGACCCGTTCTGGACTATC 18068 28 100.0 33 ............................ GGCGCAGACGCTGACTGTCAAGGCTGGGGTCAC 18007 28 100.0 33 ............................ CCTTCTTGCCGGCCTCCGCGATCTTCCGCAACC 17946 28 100.0 33 ............................ CTGGGAAATCCCCCCGGTCCTAAAAACCAACAT 17885 28 100.0 33 ............................ CGTGTACTTCGGTTTAGCGGTCAGCTGCTCCGA 17824 28 100.0 33 ............................ CCCTGTACCCCTGCCCCGCGGACCCAAGGGTGA 17763 28 100.0 35 ............................ ACGCCGGGGACCTGCTCGTGGTCTCCGGCCTGGCG 17700 28 100.0 33 ............................ GCGCAGACCCTCACGGTGAAGGCCGGGGTTACC 17639 28 100.0 34 ............................ ACCCTGGACGCGTGCCTGGGCTACCTGGCGCAGC 17577 28 100.0 33 ............................ TCGGTGATCGCCCGGGTGATCGCGTCCTGAATG 17516 28 100.0 33 ............................ GTCGCACCGGTACAAGATGAGGACCCCGCAAGG 17455 28 100.0 33 ............................ GTTCACGCATACGCAGTGTAGGTAGGGGAAATG 17394 28 100.0 33 ............................ CGAGTACACCGAACACGTGAACCTCACCCCCGA 17333 28 100.0 33 ............................ GCGGGGGTCCCTGTTGAGCCCGTCCCAGGCTGG 17272 28 100.0 33 ............................ GCGGAACAGGGTTCAGGGTGCGGGGTTCGTCGG 17211 28 100.0 33 ............................ CGTATCCGTGACAGGGCGTTCATCCCCGTGCTC 17150 28 100.0 33 ............................ CGCCCCCTGCAGGTCGTCCTGTGACATGCCGGC 17089 28 100.0 33 ............................ CTCGATAGACCCCTTCGCAGTGTCCACGAGCTC 17028 28 100.0 33 ............................ CCGTGACTCGGCTGGTGCGACCGTGTGGGGTCC 16967 28 100.0 33 ............................ GAGGCTCAGAAGTCCGAGACGGAACGTGAGCGT 16906 28 100.0 34 ............................ CCCCGTGGCCGCCTCGAAAAACTCCGAAGCAACA 16844 28 100.0 33 ............................ CAGGTACTCCCCCGGCGACGAGTAGAACTCAGT 16783 28 100.0 33 ............................ CGCGGCCTTGCCGCCGGTGCCCATGGATCCTCC 16722 28 100.0 33 ............................ GCCGGCCTGGTTGGTGGACCGCGGGTCACAGAA 16661 28 100.0 33 ............................ GCATCTCCCACCCAGGGACAGGGTTACCGTGCT 16600 28 100.0 33 ............................ CTCGCGGCGTAACCCCAAAGCACTACCCCTGCA 16539 28 100.0 33 ............................ GGGCCTTGTCCTCACCACCATTCCAGGTGGGGA 16478 28 100.0 33 ............................ GCGGTCGAAGGGTGACGCCGAGGACTGATCTAA 16417 28 100.0 33 ............................ AAGGACGAACTGGAAGGAACCACCAATGACTGA 16356 28 100.0 33 ............................ CGCTGGGGACTGGGTGCAGCAGGGTGACCTTAT 16295 28 100.0 33 ............................ CCCGGCTGGAAGTTCCCCGCCGCGACCTGCGCC 16234 28 100.0 33 ............................ CCACCAAGCTCAGACCAAATACCAAGACGCTCA 16173 28 100.0 33 ............................ CCCGATTGAGGCGGCGTGGGCTTATCAGGCGGC 16112 28 100.0 33 ............................ CAGGTCGTATGGACCGTGGGGATGACGTGGTGG 16051 28 100.0 32 ............................ CCCCCGCGTTCGGGGTGCTCATGCTCTGCCCC 15991 28 100.0 33 ............................ GTGTCCGAGCGAGAGGTGCAACGCCTGGACCGC 15930 28 100.0 34 ............................ GTAGTCCGCGGACTCCACCAGCTCACGGCGGATG 15868 28 100.0 33 ............................ CGCCCCGAACCACTGCGTCCCATCGGGGGACTG 15807 28 100.0 33 ............................ CCACGTGGAGAACCTGTCCTCCGTGTCCTGGTC 15746 28 100.0 33 ............................ CGGTGCGTGGTCGAAGTCCTGGACAATGTCCGT 15685 28 100.0 33 ............................ GTAGCGAAGGCCGGCGCCCGACACGGTACCCTG 15624 28 100.0 33 ............................ GTAGATGAGGGACACCGCGACGGCCATGTAGGT 15563 28 100.0 33 ............................ CGGTGCGTGGTCGAAGTCCTGGACAATGTCCGT 15502 28 100.0 33 ............................ GTAGCGAAGGCCGGCGCCCGACACGGTACCCTG 15441 28 100.0 33 ............................ GATTTTGGTGGTGGCCGTGGCCGCCGTCCTGAT 15380 28 96.4 33 ..........................T. GGCCCACCAGGGGTCCACCACGGTCCGGACGAA 15319 28 100.0 33 ............................ CGCGATTCACCAAGCGATCGAGAACCAGATGGT 15258 28 100.0 33 ............................ CGGTTCCCGGGGATTAAACGCAACCCCCTTCAT 15197 28 100.0 33 ............................ CCGGGGTGACGTACACGCCGGAGGCGATCGCCA 15136 27 92.9 0 .......................-...A | T,GG [15109,15114] ========== ====== ====== ====== ============================ =================================== ================== 51 28 99.8 33 GTGCTCCCCGCGCATGCGGGGATGAGCC # Left flank : CATTCTCTACGAGGACGCCATGTCCATCTGGTCGGGACGATCGGATTCGACGCTCGCCTCGGGACAGAACCATGACAGGGGCCAAACATGATGGTTCTGGCGCTCTCTGCCTGTCCCGTGGGGCTCCGAGGCGATCTGACCAAGTGGTTGTACGAGGTTTCGGCAGGCGTGTTCGTGGGAAAAGTCAGTTCCCGAATACGTAAACACCTGTGGGACAGGGTGCTCGAGACCTCGGGCTCAGGGCGGGCGATCCTCATCTGGAGCTCCAAGGGAGAACAGGGCTTGAAGTTCGAGGTCAAGGACCACCACTGGGACCCCGTGGACCTCGACGGCCTGACCCTGATGAAGCGGCGTTCCCGTGCACAGAAAACCCAGTCTCCGGAGCTGAAACGAGGGTGGAGTAAGGCCGGTGCGCAACGGCATCTGGGACGTCGGCGGTGAAAGCGCCGAAATCGATGCAAATGATCGTAGAGTGTCGATATAAACCCAGGTGAGGAAGT # Right flank : AATCCCCTAACTACTTCCGGCCCGCACCCGGAAGGGGACAGCCAGACCCTGGGTCATAAGGAGTGTGGGCGCAGTGGGCTCCTTCGCGAACTCGTCGTAGAGGAACGCCTGCGTCATGTACCGCTCTCCGTCCTCGTAGTAGCGAGTACCCAGGCACAGGGGCGGGCCGTTACGTAGCCCGCGCAGTCGCGGCGCTTCTCCCAACCCTGTTGGGCGGGCTCTCACAGCACCTCGATCTCGGCGTGGGCCGCCACGTCCGACCTGGGACCCACCCCGGGCGCCGAAGCGCCCCCGGACCTCGAGGCGCCGACACCGCACGAACCCCAGCGGCGACGTCGTACCCACCCCGGGCACACAAACTATCCCGGAGACCCCGGCGCTAATCATCGCACCATCTCGCCAGACACAACTACCGCCCCACCGACCCCGGCTCGTCCCGCGGGACGGCGAGTGTCGCGGCGGCCATGAGTACGGCGGTACCCGCCGCCGCCACGAAGACC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCATGCGGGGATGAGCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCGTGCGGGGATGAGCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //