Array 1 4580-5456 **** Predicted by CRISPRDetect 2.4 *** >NZ_QVOD01000052.1 Bacillus clarus strain PS00077A NODE_52_length_30782_cov_43.864133, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 4580 29 100.0 36 ............................. AAAATCCATTACTGCTTTTTGATGCTGCTATCTGTT 4645 29 100.0 35 ............................. ATATTTAAAACAGCGAGTTTCATTAGCTAATTCTG 4709 29 100.0 37 ............................. TCTTTTGAATTGCATCAGAAGCCATTTCCGCATTCAT 4775 29 100.0 37 ............................. TCGGATTTAATCGGTACGAAATCTAAAGCCTGTCCTA 4841 29 100.0 36 ............................. TTTGAACTAGATTCATTTTTGTACTCATAGAAGCGT 4906 29 100.0 37 ............................. TTAAAAGATAAATATGATCGTATTTACATTGATGTAC 4972 29 100.0 36 ............................. ATAACTTAAATCAAGAGCTTTACTTGCATCATCGAA 5037 29 100.0 37 ............................. TTTGTTTTCTCTTTTTCTCCCATCCCCTTTATAAAGG 5103 29 100.0 36 ............................. AGAATTTCAACCACAAGAAAGTGCGGTACAGGTAGT 5168 29 93.1 35 .............T..............G ATTGCTTCAATCGTTGTAATACCCATGCCAATATA 5232 29 96.6 36 .............T............... TCTAATTCATCATCACCAGTTTCTTTCGTATACCAA 5297 29 96.6 37 ..................A.......... CTTATACGAATACCAAGCTTGTTATAACTCCATTCAA 5363 29 96.6 36 ......A...................... GTTAAAGTTACGTATGAGTCACCTTGGTTGCGTATA 5428 29 96.6 0 ............................A | ========== ====== ====== ====== ============================= ===================================== ================== 14 29 98.5 36 GTTTTATCTAAACGTAGTGGGATATAAAC # Left flank : CACTCCCTAGATCGTTTCGGAAGAAATAAAGAATCTATCCTTAAGGGCTGCAAAGAAAAAAGGAAAGCATTTGGGAAGACCTACAACTAAAATTACTGATAAATTCATTCTAGCCTATAAAAATTGGAAAAAAGGAAATATTTCAGCGTTTGAAGCAATGAGAAGATGTAACATGACGAGTCCAACATTTTATAGAGTAGTCAAAAGGTATGAAAATAGAGAATAACATCCCCTATAAATAAAATACAATTGGTTTCTTTTTTGTACATTTGTTTATTTCTTTAGGTTTTTAGATGTGTTACGTTTATATTGTAGTAATAACTAATTTTGCAGCGTATCTTAATAATTACGTAACATGCTAAATCTCTTGTGATTCATGGGATTAACATAATTTATGAAAATATTTATGAAACAAGACTGGCGATCCGCTGCAAAATTTGCAAACTAGTATCAATTAGATTCCTTGCTGTACAAAGATTTTATCACACTTTTTATGAGGG # Right flank : ATATTTTATTATCGTAACATTAAAAGTTTATCTGAACGTAGTGGTCAAATGTTTATTATGAGTGATCTCCCTGAGATGGTTATTGTAATCTAGGGGGACTTTTTCTTTTTTAGAATCAATACAAATATTAACATGGAATATTTATCATCTTATACTATAATTAAATATGGTTAGGAGGTTACAATAATGTCAAAGGTCTCAAACTCCCTTCGTATTCTTTTATTGCTTTCAAAAAATAGAAAGATGTCAGGGGAGCAATTAGCAAGTATGCTAGAACTGAGTGGAAGAAGTGTTCGCAAGCATATTAATGATTTGTTAATGGCGGGTTTTATGATACATACGATCAGAGGACGAAACGGTGGTTATTTCTTAGAAACAAACCCTCTTTGGAACAGCTTTTTAGAGCAAAAAGAATTAGATAAGTTGACTGAACTAGTTCGTAAGCAACTAACACTTAATCCAAATGATAAAGTTGTCCAACAATTAGAAGAAAAACTAAA # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATCTAAACGTAGTGGGATATAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.10,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 2 15079-16216 **** Predicted by CRISPRDetect 2.4 *** >NZ_QVOD01000052.1 Bacillus clarus strain PS00077A NODE_52_length_30782_cov_43.864133, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 15079 29 100.0 37 ............................. ATATTCATGATTATTAAACTCAAAGTATTTCATATCA 15145 29 100.0 36 ............................. TATTTCCAACTCTTCAAAAATCCATTTCCCTTTAGG 15210 29 100.0 36 ............................. CTAGAGAAAGTGGTTGAATATTACCGTTCAAAAATT 15275 29 100.0 36 ............................. TTTTTAGTTCCGTTAGCAAGTATGGTAAACATTTCT 15340 29 100.0 37 ............................. AAAGATAATAAAGCGGCTCTTGTTTATGATTTAAAGA 15406 29 100.0 36 ............................. TTTAACATCAAAGTTGTCACGTAATAGTTTTGTAAC 15471 29 100.0 38 ............................. ACTTAATGTTACCCATGTATTAACGTGTTACGAGTAGC 15538 29 100.0 37 ............................. TCAAAACTAATCGTGAATTCAATTTCACCTTTTGCGT 15604 29 100.0 36 ............................. ACAAGTGAGATTGAAAAGCGTCGTGGGCGTTCTAAA 15669 29 100.0 35 ............................. AAGAACGAAACTATGCACCATATTTGCTGTAGAAT 15733 29 100.0 36 ............................. TTATAATAGCAGTATCAGTTGATAACCCACCGATGT 15798 29 100.0 37 ............................. AGATTATAAAGGACGAAATCAAGTTGTTGCTCACGAA 15864 29 93.1 35 A..................A......... TTATAAAGCGTACCTTTTCCACCATGTACACCGCT 15928 29 96.6 35 ............................T CTAAGCTCTCGAAGCATTCTTACATTGTTTTCTGT 15992 29 93.1 36 .......C..........A.......... CAACGAAAAGGGCATATACCTAGATGTGTAAAAAAG 16057 29 89.7 37 .G...............C..........G TGAGGAAGAACCAGAGCAAGCCTACAAAATGAACAAA 16123 29 93.1 36 .......CA.................... GCCCATACATACGGATAACCATCGTAAGGTGATACT 16188 29 82.8 0 T......C...C..A.............T | ========== ====== ====== ====== ============================= ====================================== ================== 18 29 97.1 36 GTTTTATTTAAACGTAGTGGGATATAAAC # Left flank : GTGAGATGATGTACGTTATTATTACTTATGATATTGGAGAAAAACGAGTAGGGAAAGTGTGTAAGAAACTGAAACAATACTTAAACTGGGTACAAAACTCTGTATTTGAAGGAGAGATATCCAAAGCGCAACTACTTAAGTGTTTATCTGAATTAGATTGTATAATAATATCAACAGAGGATTCTGTTTATTTATATGAAATTAATAACCCACGCAACATAAGGAAAAAAGTATTTGGGATTGAAAAAAGCTATGAAGAGCTATTTCTTTAAATTGAATCTTATAATATATTATAATTTATTAAGATTATTTTATAGTAGCAATTATTTTTGCAGTGTATCTCGTTACTGTAGGTAAATGTTAAACCCCTTGTCTCCCAAGGCTTGAATGTCATTTTTGAAAAAAATATGAAACAAGACTAACGATTCACTGCAAAACCTATAAGTTAAACACAGTAGATTCCCTGCTTTAATGAGGTTTTATTCTACTTTTTATAGGGG # Right flank : TTTTTGTTACGAGGATTACGCACATTTCTATCAAGCTAAAGCGAAATCATATCTAAAAGTACCATTAACAAAAACACTGTTCTTTGTGGCTGTCATTATTGTTCAAGGAAAAATAAGTTGAGAAAATAATATAGTTTTAAAATAGATTTTTTAGATATGTTTTAGACACGAATTTACCCTTTTACTGTACGCTGTATCAACAATATATGTATCTGAAACAGATAATTACAGAACAGTAGTAAATCAACTAATTAACCAATTCCAAGCATATAAGCATTTCTTAAAAAGAAAATTTTTATTATGCACATAATCTATCTAGATTATGTGCTTTTTTGTCGGAATTAACAGAAAGAATTTTCAGAAATGTTATAGATGTTAAGTGACAAAAAAGTTGTTTAATTTACAATAAAGTCATTTAAAAAATAATAAAGTTGTTAAAAAATGCGAATCATTCTATTTAACAATCGGGAAAGATTGTTAAATAAATTAGATCTGCTGAA # Questionable array : NO Score: 3.11 # Score Detail : 1:0, 2:0, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATTTAAACGTAGTGGGATATAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.41%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-15] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //