Array 1 139212-140139 **** Predicted by CRISPRDetect 2.4 *** >NZ_QVAY02000003.1 Pseudomonas aeruginosa strain PABL098 NODE_3_length_159673_cov_61.1564, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 139212 28 100.0 32 ............................ GTTACGAAAAGTGGTCGGAACAGGGCCGCGAC 139272 28 100.0 32 ............................ GTGCTGCGAAGCAGCTTCGACTTCGGCGGGCT 139332 28 100.0 32 ............................ GCAGCGATCAACGGCCATATCTACGAGCTGGA 139392 28 100.0 32 ............................ CTGACCCGCCGCATGGTGCTGGGCCTGCAGGA 139452 28 100.0 32 ............................ TGCCAGCGGGCGGTATGCGCCTGCGGAGCTTC 139512 28 100.0 32 ............................ TCGATCAGCTTCGCGGCGCGGGCGGTGTATTC 139572 28 100.0 32 ............................ ATGTACGAAGTGCAACGCAATACCTACGTCCC 139632 28 100.0 32 ............................ GGACGACGTCGGCGGCGAGGGTGAGCCGCCCG 139692 28 100.0 32 ............................ AGATCGCGGACGGCACAGGCCCATTCGACGAT 139752 28 100.0 32 ............................ TATAGGAGAGATCAGCGCTCGGAGGCATCTCT 139812 28 100.0 32 ............................ AGGAACGGCGTGCCCTTTTCGTTGGAGATCGT 139872 28 100.0 32 ............................ TAGCGATCGTCAGGCAGTACCTGGTGCAGTTC 139932 28 100.0 32 ............................ TGGTAGCGCTTCGGCTTGTCCGGCCCATCGGG 139992 28 100.0 32 ............................ ACGAGGCATGGTTGAATCGCCCACAGGGCGGC 140052 28 100.0 32 ............................ TTCAGCTTCTGCTTCAGCCGCGGATCGCTGAT 140112 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 16 28 100.0 32 GTTCACTGCCGTATAGGCAGCTAAGAAA # Left flank : ACATGTGTCCGCGTAGCGCGACCCTGTACGTGGACACCCATGCACTCCCCACGCACTTGTTCGACAACGCGAAAGTGCGCCTGAGGTCGGCAATCAACATCCTGGCCATGACCCGTTTGCTCGATGAGAAAGAAGAGCCCGGCGGCACCCTGGCCTACATCAACGGTGCGTTGCTGTCGCTGCTCAGCGATGCCTTGTCCGAAATCGAGGCGGGCCACCCGAGCCTGTAGCGCCGCTCCCTGGCGCGACGCCCCCGGCCTGGCCGGGGGCTTTGCGGCATCGCTCATCACAGGACCTTTTGCCCTCGAACGGCACGGTTGATCGCCGTCCCGGTCCTCGCGAAACGGCTTCTAATTGCCCGAAGCTTCCGACCCTTTTTTCGGACGATTTCTTACACCCTTATAAATCAGTAAGTTACGAGGCCTCGAAAAAAGAGGGTTTCTGGCAGGAAAAACTCGGTATTTCCTTTTCCTTCAAATGGTTATAGGTTTTCAGGGCTA # Right flank : ACTCAAGAAAGAGCAGAACGGCCAGCCTGCGCCGTTCATTGCCGTGTAGTCCCGTAGGGCGAATGCCGCCATAGGCGGTATCCGCCCTACGGATCGGGTTCCTGGCATGCACGAAGTGAGGCTTGCCCTCCAAGTGGTGGGGCGGCAAACCCGCCCCGTCAGGAGGCCGAGCGGAATCGTTGCGGAGGGGGACGAGTGGCAGGATGCCGCGAGAGCCGCCTCGGTCCACGAAGGACCGTGGCGGCGTGCCGCCGGGAGCAACGATGCAGCGAGGGCACCCCAGCCGAGAGGCGGCTGGGGCCGGATGCCGGGGCGAGTCTTTTGGTTCCTTTTGGACGCTTGCAAAAGGAACTCGCCTGGGAAGGCGAAACAAGAGGTCAAGGCAGGCACAGAAAACAGCTTGACCACCAAACATGACGCCCGCTCAAGCGCTAAGCAACGGCGTCCCCCATCACTGCCGTGTAGCTAAGAAATCGCGAGCGATATAGTCCCGTAGGGCG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGTATAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [60.0-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //