Array 1 206751-205443 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMCW01000002.1 Micromonospora haikouensis strain DSM 45626, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 206750 28 100.0 33 ............................ CGGCTCGCCGCCGGCCTGAAGAACGGCCTTCAG 206689 28 100.0 33 ............................ CGCTCCCGCCGTCGGCGTCGACCCCACCGAAGA 206628 28 100.0 33 ............................ CCGCTCATCCCAGCCTGAGGAGGCAACCCATGA 206567 28 100.0 33 ............................ CCCGTCAACAGCCGACGCGATGGTGCTGGACCC 206506 28 100.0 33 ............................ CGCCATGCCGGTGATGCCGGTGGTGAGGCCGTG 206445 28 100.0 33 ............................ CCAGGTCGTCTGCGTGGCGACCCAGATGATCGC 206384 28 100.0 33 ............................ CTTCTGCGCCCGGGCGAGAGCCTCACCGTCACC 206323 28 100.0 33 ............................ CCGACCAACGCGCGCCGCCTGCTGGCCGCTGAG 206262 28 100.0 33 ............................ CTGGGCCGCGTACGGCCTGTTCCGGGGCCCGTG 206201 28 100.0 33 ............................ GGACTGGGGCGGGTGGCGGGTCTGGAAGGTTGA 206140 28 100.0 33 ............................ CCCGGCCAACACGGAGGGCTGATCGATGCCGAA 206079 28 100.0 33 ............................ CATGATGGCCTTGGCGTCGCGGCGATTCTCCAG 206018 28 100.0 33 ............................ CACCGGCTCCGAAGGCCGGGCCACCCGCTCTGG 205957 28 100.0 33 ............................ CGAAGCAGTCCTCGGTGCGGACCATCCAGCGCT 205896 28 100.0 33 ............................ GCTGAAGGACGGCGACGACCGGCCCCTGTGGGT 205835 28 100.0 33 ............................ CAGCGGGAGCTGCTCGAGGTGACACTCCATGTA 205774 28 100.0 33 ............................ GTGGTCGATCGCGGCCCGGGAGTCCGGGCAGGC 205713 28 100.0 33 ............................ CGCGTTGTTGATGGACAGGGAGGTGTGCTCGTC 205652 28 100.0 33 ............................ CGGAAGGGTGTTGACCGCCTCTCGGAGCTGGGA 205591 28 100.0 33 ............................ TCGACGCACGATACCGAGAAGGAAAAGCCCCAC 205530 28 100.0 33 ............................ CGCGAAGAACCCGATGATCGCCGGGGTCACCCC 205469 27 96.4 0 .........................-.. | ========== ====== ====== ====== ============================ ================================= ================== 22 28 99.8 33 CTGTTCCCCGCGCACGCGGGGGTGATCC # Left flank : GCGATCTATCTCGACAAGCCGCACGAGACAGCCGCCTACAACACCATCTGGGCCGACATGGCCAGCCGCGCCCTCAACGAGTCCCGATCCCAGAGCCTGATCCAGCAAGCCGCAGAGGAGTACTCCCGTGCCTGACCTGACCGGTGCCGTCTGGCGCAAGTCGACCCGAAGCAACAACGGCGGCAACTGCGTCGAGGTCGCCGACAACCTCCCGGGCGTCGTCGGGCTACGCGACAGCAAGGACGTGGCCGGGCCAGTGCTGACCTTCACCCCGTCGTCCTGGGCCACCTTCATCGAGGACGTCAAGGCCCAGCCACCTGGCCGCTGAAACTGGCAGGAGGCTGCGCCACGGTTCCTCTCCTGCCCACCGAAAACGCCGGTCAACTCGTAGGCTGTTCACCACCTAGCCTGGACGCCCAGCCACCACTCAGGATGTGATCTTGACCAGCAAAGTGAATGAAATCCGCAGAGTTGATCTATAGCGCCCCAGGTCAGGAAGT # Right flank : CGCTCAACCCGGCGATCGTCCCGGAGGCTCGTTGTGCTGGCAGCCGGGCGATGCACACTGCGGTCGAACCTAAAGAATCGTTCTTGATCTAGTTTTCTCGTGATACCCACCAGCGCTTGATATACATGCCAGAGGAAGTTGATATCATCCGGAGGACCTACGAGAGAGGCAGGCCAGTGTCCCGAACCATTCTCGACGTCGATGACGAACTACTCAGCGAGGCGGCGAAGATCTTCGGCACCACCACCAAGAAGGCCACCGTCAACGCAGCCCTGAGGGCGGCGGTCGACCGGGAGAAGCGTCGGGAGTTCGCCGACTGGCTCAAGAGCGGCGGCCTTCCCGACCTGACAGAGCCAATCGCTGACGAGCGGGACGCCGCGTGAGCCGTGAGATCTACCTGCTCGACAAGTCGGCGTTGGCCCGCTGGCCGAAACCGGTCGTCGCGCCGGTCCTCGACGAACTGTCCGACCGTGGACTACTGGCGGTCTGCGGCGCGATAG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTCCCCGCGCACGCGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGTTCCCCGCGCAGGCGGGGGTGATCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [30.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 32945-31637 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMCW01000021.1 Micromonospora haikouensis strain DSM 45626, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 32944 28 100.0 33 ............................ GAAGTGCTTCGTGGCGAGCCACTTCATCCAGAC 32883 28 100.0 33 ............................ GGCTGTCCACGGACGGCATGTCAGCCACCCACC 32822 28 100.0 33 ............................ CGGCGCACAGGACAACGCCACCGTCCGAAGCGC 32761 28 100.0 33 ............................ CGAGGAGCTGACGTCCGGCAAGCGGACCCTCGA 32700 28 100.0 33 ............................ CGCCGCCGGGCGATCCGGCGCCCAACCCCACCA 32639 28 100.0 33 ............................ GCTGTATCCGCTGCGGCACTGGTTCGCGTCCAC 32578 28 100.0 33 ............................ CGAGGAGCCGGACCCTACCCAGCCGGCTCCCTG 32517 28 100.0 33 ............................ CGCCACCTGGAAGCGGTCCATCGCCTCAGCCAG 32456 28 100.0 33 ............................ CCACGCCTGGTAGTCGATGCCGCCGTCACGCAG 32395 28 100.0 33 ............................ GGAGGACGGACGACCAGTCCCTGACGTGCTGTT 32334 28 96.4 33 ........................C... CAGGTTGGTCTTGCCGCGGCCCCGCACGCCGAT 32273 28 100.0 33 ............................ CACCCCGACCACCTGCACCAGGTCGGTGCGGGC 32212 28 100.0 33 ............................ GGCCATCGACCGGTCAGAGATGTACGTCTCGCG 32151 28 100.0 33 ............................ CACCCCGACCACCTGCACCAGGTCGGTGCGGGC 32090 28 100.0 33 ............................ GGCCATCGACCGGTCAGAGATGTACGTCTCGCG 32029 28 100.0 33 ............................ CGCCTACATCGCCGGCGCGAGCATCAACGCCGT 31968 28 100.0 33 ............................ CGGTCCACCGGTGCCGACGACCCGGCCCTCGTT 31907 27 96.4 33 .......................-.... CGCCACCGTCGCCGCGCCGCCGAGCGTGACCAG 31847 27 96.4 33 .......................-.... CGCGCCGATCGCGTTGAGCGCGGCCTAAAGCGC 31787 28 100.0 33 ............................ CAGGGAGTTGACGCCCCGGTCGCGGCCCACCGC GG [31764] 31724 28 85.7 34 .........C......T.......T..G CTTGTTGCGCAGATGCTCGATCTTCGCGGTCAAA 31662 26 82.1 0 .....T.........A...C--...... | ========== ====== ====== ====== ============================ ================================== ================== 22 28 98.0 33 CTGCTCCCCGCGCATGCGGGGGTGATCC # Left flank : GGCAACGGCGCAGCGATGGGCCGCCGAACGCTTTCTGGCAGCCACATGTCCCACAGCAGGCCGGCGACATCGGCGCTGTCGGCGAGGTGACGATGCAGCGGAAGCCAGAAGCCCCGATCGCGGTTCGTCTTGCCCCAGACAAGACGGGCACTCTCGCTGAGACCAGGTCGATCGGACACGGAGGAGATGAGAACAGAGGGGTACGACACCTGACGACCAACTCCCAGGGACGACTCGCAGACCGACCGCGCGGCCGCTTTCAGCATCGAGAACGACGCTCATGTACGTCCGGACGCGGCCTGGCTGGAGATCGAGCAAGATTAATCCGGTCGCCGGAACCCCTCCCTATCGGATGCCCTCGCGGAGATTCCATCGGTACGCTGATCCGGCTGCGACTCACACCAACCCAACCGGCGCGCTCGATTCCAACAGCGATGGTCTTGAGAGGCAAAGTGAACGAAGACCAGGAAGATGATCTTTAGCATCGCAGGTCAGGAAGA # Right flank : CGCTTCAAGACCCCACCTCAGACGAATGACATAGTTGGTGGGGCATTCCCCGGCTCGCCGTGGGTGATCCCTAGCTCGCAGTAGCTTGCGACAGGAAGACGATCATGTTCCCCACAGTGGTGGGGTTGGCCGAAGGGCTTGCCCTTCGGCCACCGCCATCTTTTAGCCGGAAACTGCGCTCACGCCTGGATCAGGATCCAGATGATCACGACAACGAGGGAGATCGTGATCGATTGGGGCAGCACGATGGAGAGAGAGAAGCCAGGGCGAGCGGCCACAGGAACTCCTTAAAAGGAACTAGCTCGAAGTAGCTTGGAGTACTCCACTATCGCATGTGGACCCTACACCCCCAAGCAGACATGAACGACCGAAGGGGCAATTGCAGCTTTTGTCCGCTATTAGCTATTTCCGCACTCTGCAACCTGCAAGGCGAGCGCGAGGGCACCTTGCTGCAAACAGAGACGGAGGCTGCACCCCGCTGAAGGATCACGAACGTCAGG # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCATGCGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCGCATGCGGGGGTGATCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-C/E [Matched known repeat from this family], // Array 2 42756-43027 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMCW01000021.1 Micromonospora haikouensis strain DSM 45626, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 42756 28 100.0 33 ............................ GCGGCTAGACCGCGAGATCGACCAGGCCGAGCG 42817 28 100.0 33 ............................ CGCGCTTGACCTGGTCGTCACGGGCACCGGCGA 42878 28 100.0 33 ............................ CCTGCAGTGCGATGTCGAGTACGCGACTCAGTC 42939 28 96.4 33 .....................A...... GCTGGCCACCCAGATCGAGCACGCCCGCCAGGC 43000 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 5 28 99.3 33 CTGCTCCCCGCGCACGCGGGGGTGATCC # Left flank : TGTGGGACGAGGAAGGCTACGAACTCGCCGGCGGCCGGAACTACTCCGGGGACGTGGACTTCTGATGACCGTCATCATCCTCACCGCCTGCCCCGAAGGGCTGCGGGGGCACCTGACGCAGTGGCTGCTGGAGATCTCTGCCGGGGTGTACGTGGGACACGTGAACAGCCGGATCCGACAGCGGCTCTGGGCCAAGGTCGTCGAGATGGCCGGGCCAGGCCGGGCACTGCTCGTCTACCAGCGGCCAGGTGAGCAACGACTGACCTTCGAGGTACACGACCATCACTGGGATCCGGTGGACTTCGACGGGATCACGCTCATGCGTCGGCCTACGGATAGGAGTTCGTACAACCCAGCAGTGGGGCGGGGATGGAGCAAGGCGTCCAAGCGTCGGAAGTTCGGGCGGAGGGCCCCAGATGGGGGCAGCGGATCGTCGGTTCCCTCCGGACCAAGTGAAGGAAAAAGGGATAGTTGATCTTTAGCGCCCCAGCTCAGAAAGT # Right flank : CCCTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 6.02 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCACGCGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCATGCGGGGGTGATCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-1.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-C/E [Matched known repeat from this family], // Array 1 2590-2074 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMCW01000047.1 Micromonospora haikouensis strain DSM 45626, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 2589 28 100.0 33 ............................ GATGAACTCCGTCTCGGCGGTGCACGTGTCCGC 2528 28 100.0 33 ............................ CGGGGTACGGTTGTATTCCTAACCTCGATTCCA 2467 28 100.0 33 ............................ TATTTTGCGCTAGATAAGCGTGTTCCTCAGGCC 2406 28 100.0 33 ............................ CATCCCGACCTGGAGCAGCGCGATGCCGGCCAG 2345 28 100.0 33 ............................ GTCCTGGATCTCCCACTTGGCGACGTCGCGCTG 2284 28 100.0 33 ............................ CGCTGCGACGAGCACGGCGTCGGCACCTTCGCC 2223 28 100.0 33 ............................ CTCCACCGGCCAGGCGCGGGCCCGGTGGGCGGC 2162 28 100.0 33 ............................ CGACGTGTGGGAGCAGGTGCCATGACGAAGTCC 2101 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 9 28 100.0 33 CTGTTCCCCGCGCACGCGGGGGTGATCC # Left flank : CCACCGGGAGCTGGGCGGCCCCGACGGCAACCTGGGTGGGGCCTTCTGACCGATTCGACCGCCTGGTGAGCCTTCGCTGGTGGTCGGCGTGGAGAACGACAGATAGACCCCAGGCCGCCCCTTGCCGGGTGGCCTGGGGTCAGGGCCGCCTCCGGCGGGTGCCAACGACTCCGGGATGGAGTTGCCGAACGGTTGCGGGCGTGGGTGGTGGGGTGGGATGCCATCCCGTCCACCGCCGATCCAGGCAGAGCCGAGCAGACCAGAGCCAGGGCGACAAGGTCGTTCGTCCGGCGGAGCCCTCCACCTTGTCGCCCTGGCCCGCTCCACGGTGTGTGGGTCGGCGGCGGAGGGATGGCAGGAGCGGGGGCGCGGTGCGCGCCAGGCGCGGCGAGTCAGCGGTACCTTGTCATCAGCAACTGGGCGGCATGGGCGGAGGGATCTTGGGCGGGCAAGTGAATGAAATCGACGTTGTTGATCTTTAGCGGTGCAGGTCAGGAAGT # Right flank : CAGCGCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTCCCCGCGCACGCGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGTTCCCCGCGCAGGCGGGGGTGATCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [1.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.14 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //