Array 1 73982-72191 **** Predicted by CRISPRDetect 2.4 *** >NZ_MSIM01000004.1 Corynebacterium diphtheriae strain 4461 Contig_4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 73981 28 75.0 25 TCA..CA............A.....C.. GGCGGTCCAGTTCTCAAAGTCCCTG T [73956] Deletion [73929] 73927 28 85.7 33 ..........C...GAC........... CAATACATGAGGATTGACAGTGCTGATTATGAC 73866 28 96.4 33 ..........C................. ATACTGGGTGTGTCTCGTGGATCCGTTAACAAC 73805 28 96.4 33 ..........C................. AAGGGTAGCGTGCAGTCACGACAAAACCAAGGC 73744 28 96.4 33 ..........C................. GCTGGGGGAGATCAAAACCGCAGGGACGAACGG 73683 28 96.4 33 ..........C................. CTGGGGTCCCAGAGGGCGTCATCGCTCGTGTTG 73622 28 100.0 33 ............................ TTTTGAGCAACCCGCGCCGCGGCGCGGGCAAGG 73561 28 96.4 33 ..........C................. TACGGGTCGACCTCACTGCTGGTCCTGTGGGCG 73500 28 100.0 33 ............................ TAGCCATCATTCTCTCCTAGGGCCTCTGAAAGG 73439 28 100.0 33 ............................ TACGGGTCGACCTCACTGCTGGTCCTGTGGGCG 73378 28 100.0 33 ............................ ACGGGACCTATGCGGGCATTGATTACACCATCC 73317 28 100.0 33 ............................ ATTTGCGAAACCACCTCTATCTTCGGGACAGCG 73256 28 100.0 33 ............................ TGTTTTATTTTCCGCTCGTGCTTCAGCAACTAG 73195 28 100.0 34 ............................ CATAGGACTTCCCCTTCGAGTACATCCCCGCTGG 73133 28 100.0 33 ............................ GATGCTTTTACGGATATCCTCAGCCGGATTGCC 73072 28 100.0 33 ............................ GATGCTTTTACGGATATCCTCAGCCGGATTGCC 73011 28 100.0 33 ............................ GGGTTTTCATTGCTTTTATGCTGGGTGTGGCTA 72950 28 100.0 33 ............................ TCTGTAGGATTCTGCCCCTTTTCGCAGAAACAG 72889 28 96.4 33 .....................A...... GCGCCGCTGTCGTCAAGGTCGGCGATGAGGGTG 72828 28 100.0 33 ............................ GGCCTGTGATCACGTAGAGCATTCCCCACCTCC 72767 28 100.0 33 ............................ CCGTTGAGCGAGTGCACGATGTCGGCCCATAGC 72706 28 100.0 33 ............................ AAACGGGACGCTGTGACGGCGGGGCAGCATTCT 72645 28 100.0 33 ............................ AAATACACAGTGGAACCGAATCCAAGATCGTGG 72584 28 100.0 33 ............................ ATCATGTGAAGGTGATGGTCGAATGAGTGCCGG 72523 28 100.0 33 ............................ AGCTCGGCAGCAAGCAGCGGTCATGGGTGCGAC 72462 28 100.0 33 ............................ TGTCATCGCGTCCTGCCTAGTCCGCTAACTTCG 72401 28 100.0 33 ............................ TTCATGGGTGTATCCCCTCCTTCCCCCATGAGG 72340 28 100.0 33 ............................ GCAGCGAGGCGAGGGCGATACCAGCACTTATTG 72279 28 100.0 33 ............................ TAGCGTGTAGATCGTCCCTGGTGGCGCTCGTGG 72218 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================== ================== 30 28 98.0 33 GGCTCATCCCTGCTAGTGCGGGGAAAAC # Left flank : TACATCAAAAAGCTCGAAGCGATCAGCGTAACGATCCAAATAGTCTAGGACGACCTGATCTTTCCCTTTTCGAGCAAGACGACGTCTCATCTTGTTGAACCATTCAAGAAAATCAAAAGGTTCCACGTCCATGTCGATATCCATGGAATGGGCACGCCAGAAAATAGCCAGCAAAAGCCGCATCACAGCATAGTCTTGAGCCGGGGACTCCCCCTGAATATAGGCAACCTGCACCTCCCCCGCGAAAATATCTCGTATTCCAACTGAAATCTGGTTACCTTGAGTATCAAGAGCCAGAATCCAGCGGATCTCCAGTAACGAAGCCATCACCAACTCCTTCCTGATTGTTTTAAAACTCCCAACTTAGGAAGCACTTTTCCACAGAATACACTCTATAGATATTAAAAGTTAGTTTTTTCAAAATTTTTTAGTAGAGCCATCATTTACTGATTTCTCTGAATGAAAAACACAGATTCCAAAACCCGTTCTTCAACAAAGAT # Right flank : ACTTATCAAGCTGCACGTTTAGAGCCAGTTAGAGCTTATTACATATAACTTTGTTTCAGCAATTTTTCTGCTTCATCTTTATTTCTACTCTTTTAGGATCAGCCATTCACCCAAATTTGCTTAGTCCTTTCTTCTAGCCATAGGCTGGCATTGTTCCCTGCGATCAGGGATGAGCCTTTTTAATATCTCTACAAGATTTACATAGGCATACTTCCCCGCACCAGCGGGGTTTCCTTTTATGCGTCTTCCTTTGGGCAGACTTCCACCTCTAATCCACGTTCATTGGTATAACGCACTAGGAATCGACCTACACGAGCCTCTCCTCTTTCGTCGAAAAGCAACGCAACTTGGCCTTTAATCAAACCGGATCGTTGCCATTCTGGTGGTGTTTGTGCTTCGAGCGAATCAATAACGGCATTAAAATCCGAATCTCTACGTGTCATTCGGGTTGGCAGGCGCACTGTGTTTCCAGCCAATGCCTCAGTTTCTTTCCAAGTAAG # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:-0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCTCATCCCTGCTAGTGCGGGGAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.50,-10.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.74 Confidence: LOW] # Array family : NA //